RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
CDRT1-206ENST00000571263 MTURNQ8N3F0 131 aa7.17□□□□□ -1.26
CDRT1-206ENST00000571263 PDE6GP18545 87 aa7.16□□□□□ -1.26
CDRT1-206ENST00000571263 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
CDRT1-206ENST00000571263 SMIM29Q86T20 159 aa7.16□□□□□ -1.26
CDRT1-206ENST00000571263 TEN1Q86WV5 123 aa7.16□□□□□ -1.26
CDRT1-206ENST00000571263 APOBP04114 4563 aaKnown RBP7.16□□□□□ -1.26
CDRT1-206ENST00000571263 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
CDRT1-206ENST00000571263 CRYGAP11844 174 aa7.14□□□□□ -1.27
CDRT1-206ENST00000571263 Q6JHZ5 121 aa7.14□□□□□ -1.27
CDRT1-206ENST00000571263 OBSCN-AS1Q96MR7 158 aa7.14□□□□□ -1.27
CDRT1-206ENST00000571263 DSCR8Q96T75 97 aa7.14□□□□□ -1.27
CDRT1-206ENST00000571263 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
CDRT1-206ENST00000571263 ETDBQ3ZM63 59 aa7.12□□□□□ -1.27
CDRT1-206ENST00000571263 KRTAP1-4P0C5Y4 121 aa7.11□□□□□ -1.27
CDRT1-206ENST00000571263 C3orf22Q8N5N4 141 aa7.11□□□□□ -1.27
CDRT1-206ENST00000571263 LOC110117498A0A087WWA1 95 aa7.1□□□□□ -1.27
CDRT1-206ENST00000571263 Q8NBF4 154 aa7.1□□□□□ -1.27
CDRT1-206ENST00000571263 IGLV9-49A0A0B4J1Y8 123 aa7.09□□□□□ -1.27
CDRT1-206ENST00000571263 TRBV7-4A0A0J9YYF1 115 aa7.09□□□□□ -1.27
CDRT1-206ENST00000571263 A0A1B0GW54 56 aa7.09□□□□□ -1.27
CDRT1-206ENST00000571263 C9orf153Q5TBE3 101 aa7.09□□□□□ -1.27
CDRT1-206ENST00000571263 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
CDRT1-206ENST00000571263 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
CDRT1-206ENST00000571263 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
CDRT1-206ENST00000571263 J3QR89 54 aa7.07□□□□□ -1.28
CDRT1-206ENST00000571263 MOBPQ13875 183 aa7.06□□□□□ -1.28
CDRT1-206ENST00000571263 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
CDRT1-206ENST00000571263 CCKP06307 115 aa7.05□□□□□ -1.28
CDRT1-206ENST00000571263 CD164Q04900 197 aa7.05□□□□□ -1.28
CDRT1-206ENST00000571263 Q6Q795 121 aa7.05□□□□□ -1.28
CDRT1-206ENST00000571263 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
CDRT1-206ENST00000571263 A0A087X002 238 aa7.04□□□□□ -1.28
CDRT1-206ENST00000571263 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
CDRT1-206ENST00000571263 Q6ZQT0 140 aa7.04□□□□□ -1.28
CDRT1-206ENST00000571263 RYR1P21817 5038 aa7.03□□□□□ -1.28
CDRT1-206ENST00000571263 A0A1B0GV72 72 aa7.03□□□□□ -1.28
CDRT1-206ENST00000571263 ACYP1P07311 99 aa7.03□□□□□ -1.28
CDRT1-206ENST00000571263 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
CDRT1-206ENST00000571263 C4orf48Q5BLP8 95 aa7.03□□□□□ -1.28
CDRT1-206ENST00000571263 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
CDRT1-206ENST00000571263 OXTP01178 125 aa7.02□□□□□ -1.29
CDRT1-206ENST00000571263 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
CDRT1-206ENST00000571263 HSPG2P98160 4391 aa7.02□□□□□ -1.29
CDRT1-206ENST00000571263 KRTAP17-1Q9BYP8 105 aa7.01□□□□□ -1.29
CDRT1-206ENST00000571263 FAT1Q14517 4588 aa7.01□□□□□ -1.29
CDRT1-206ENST00000571263 K7ERU9 68 aa7□□□□□ -1.29
CDRT1-206ENST00000571263 VPS25Q9BRG1 176 aa7□□□□□ -1.29
CDRT1-206ENST00000571263 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
CDRT1-206ENST00000571263 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
CDRT1-206ENST00000571263 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
CDRT1-206ENST00000571263 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
CDRT1-206ENST00000571263 SPINK1P00995 79 aa6.98□□□□□ -1.29
CDRT1-206ENST00000571263 TRBV7-7A0A0K0K1E9 115 aa6.97□□□□□ -1.29
CDRT1-206ENST00000571263 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
CDRT1-206ENST00000571263 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
CDRT1-206ENST00000571263 SS18L2Q9UHA2 77 aa6.97□□□□□ -1.29
CDRT1-206ENST00000571263 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
CDRT1-206ENST00000571263 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
CDRT1-206ENST00000571263 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
CDRT1-206ENST00000571263 SCGB1A1P11684 91 aa6.95□□□□□ -1.3
CDRT1-206ENST00000571263 Q5XG85 94 aa6.95□□□□□ -1.3
CDRT1-206ENST00000571263 A0A0G2JQZ4 141 aa6.93□□□□□ -1.3
CDRT1-206ENST00000571263 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
CDRT1-206ENST00000571263 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
CDRT1-206ENST00000571263 A0A087WSZ3 146 aa6.92□□□□□ -1.3
CDRT1-206ENST00000571263 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
CDRT1-206ENST00000571263 HRCT1Q6UXD1 115 aa6.92□□□□□ -1.3
CDRT1-206ENST00000571263 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
CDRT1-206ENST00000571263 NREPQ16612 68 aa6.91□□□□□ -1.3
CDRT1-206ENST00000571263 LINC00846Q9NV44 126 aa6.89□□□□□ -1.31
CDRT1-206ENST00000571263 J3KT08 172 aa6.87□□□□□ -1.31
CDRT1-206ENST00000571263 MT1HL1P0DM35 61 aa6.86□□□□□ -1.31
CDRT1-206ENST00000571263 Q6ZVQ6 151 aa6.86□□□□□ -1.31
CDRT1-206ENST00000571263 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
CDRT1-206ENST00000571263 J3QL48 77 aa6.85□□□□□ -1.31
CDRT1-206ENST00000571263 LINC00643Q86TS7 51 aa6.85□□□□□ -1.31
CDRT1-206ENST00000571263 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
CDRT1-206ENST00000571263 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
CDRT1-206ENST00000571263 ATP5EP2Q5VTU8 51 aa6.83□□□□□ -1.32
CDRT1-206ENST00000571263 HERC2O95714 4834 aa6.82□□□□□ -1.32
CDRT1-206ENST00000571263 BPY2O14599 106 aa6.82□□□□□ -1.32
CDRT1-206ENST00000571263 SIGMAR1Q99720 223 aa6.82□□□□□ -1.32
CDRT1-206ENST00000571263 CXCL6P80162 114 aa6.81□□□□□ -1.32
CDRT1-206ENST00000571263 C1orf195Q5TG92 126 aa6.8□□□□□ -1.32
CDRT1-206ENST00000571263 NDUFB1O75438 58 aa6.79□□□□□ -1.32
CDRT1-206ENST00000571263 CDIP1Q9H305 208 aa6.79□□□□□ -1.32
CDRT1-206ENST00000571263 IGKV4-1P06312 121 aa6.78□□□□□ -1.32
CDRT1-206ENST00000571263 FP248Q71RG6 208 aaPredicted RBP6.78□□□□□ -1.32
CDRT1-206ENST00000571263 Q96NJ1 140 aa6.78□□□□□ -1.32
CDRT1-206ENST00000571263 A8MWP4 228 aa6.76□□□□□ -1.33
CDRT1-206ENST00000571263 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
CDRT1-206ENST00000571263 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
CDRT1-206ENST00000571263 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
CDRT1-206ENST00000571263 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
CDRT1-206ENST00000571263 DSCR10P59022 87 aa6.73□□□□□ -1.33
CDRT1-206ENST00000571263 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
CDRT1-206ENST00000571263 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
CDRT1-206ENST00000571263 PRR15Q8IV56 129 aa6.72□□□□□ -1.33
CDRT1-206ENST00000571263 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms