RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
CHD3-213ENST00000571249 OCIAD2Q56VL3 154 aa4□□□□□ -1.77
CHD3-213ENST00000571249 XP32Q5T750 250 aa4□□□□□ -1.77
CHD3-213ENST00000571249 C2orf82Q6UX34 121 aa4□□□□□ -1.77
CHD3-213ENST00000571249 MRPL55Q7Z7F7 128 aaKnown RBP4□□□□□ -1.77
CHD3-213ENST00000571249 SMIM29Q86T20 159 aa4□□□□□ -1.77
CHD3-213ENST00000571249 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CHD3-213ENST00000571249 KMT2DO14686 5537 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 K7ERU9 68 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 LST1O00453 97 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 PFN2P35080 140 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 ATXN8Q156A1 80 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 Q1RN00 199 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 LINC00337Q8N6G1 96 aa3.99□□□□□ -1.77
CHD3-213ENST00000571249 H7C2G1 150 aa3.98□□□□□ -1.77
CHD3-213ENST00000571249 UNQ6190/PRO20217Q6UXQ8 127 aa3.98□□□□□ -1.77
CHD3-213ENST00000571249 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
CHD3-213ENST00000571249 Q8NBF4 154 aa3.98□□□□□ -1.77
CHD3-213ENST00000571249 TRBV10-2A0A0K0K1G8 114 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 H3BT86 120 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 TRACP01848 142 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 ETDBQ3ZM63 59 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 CARD19Q96LW7 228 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 C6orf48Q9UBA6 75 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 PKIGQ9Y2B9 76 aa3.97□□□□□ -1.77
CHD3-213ENST00000571249 C9JAW5 83 aa3.96□□□□□ -1.78
CHD3-213ENST00000571249 H0YGX0 51 aa3.96□□□□□ -1.78
CHD3-213ENST00000571249 SLC25A20O43772 301 aa3.96□□□□□ -1.78
CHD3-213ENST00000571249 C9orf116Q5BN46 136 aaPredicted RBP3.96□□□□□ -1.78
CHD3-213ENST00000571249 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
CHD3-213ENST00000571249 ANKRD29Q8N6D5 301 aa3.96□□□□□ -1.78
CHD3-213ENST00000571249 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
CHD3-213ENST00000571249 J3QR89 54 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 TLX1NBP0CAT3 122 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 FAM19A1Q7Z5A9 133 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 TYMSOSQ8TAI1 123 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 SMIM11BQ8TCY0 68 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 CAMK2N2Q96S95 79 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 TMEM126AQ9H061 195 aa3.95□□□□□ -1.78
CHD3-213ENST00000571249 A0A087X002 238 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 A0A1B0GX51 115 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 IGLV6-57P01721 117 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 CD164Q04900 197 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 Q8NDZ9 215 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 PPDPFLQ8WWR9 84 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 CLEC2BQ92478 149 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 LINC00526Q96FQ7 95 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 DHRS4-AS1Q9P1J3 65 aa3.94□□□□□ -1.78
CHD3-213ENST00000571249 NDUFC2-KCTD14E9PQ53 114 aa3.93□□□□□ -1.78
CHD3-213ENST00000571249 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
CHD3-213ENST00000571249 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
CHD3-213ENST00000571249 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
CHD3-213ENST00000571249 FAM240AA0A1B0GVK7 77 aa3.92□□□□□ -1.78
CHD3-213ENST00000571249 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
CHD3-213ENST00000571249 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
CHD3-213ENST00000571249 LOC107984640A0A0U1RRK4 108 aa3.91□□□□□ -1.78
CHD3-213ENST00000571249 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
CHD3-213ENST00000571249 C22orf24Q9Y442 160 aa3.91□□□□□ -1.78
CHD3-213ENST00000571249 M0R378 163 aa3.9□□□□□ -1.79
CHD3-213ENST00000571249 BAALC-AS2P0C853 105 aa3.9□□□□□ -1.79
CHD3-213ENST00000571249 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
CHD3-213ENST00000571249 LINC00304Q8N9R0 145 aa3.9□□□□□ -1.79
CHD3-213ENST00000571249 OBSCN-AS1Q96MR7 158 aa3.9□□□□□ -1.79
CHD3-213ENST00000571249 IGLV8-61A0A075B6I0 122 aa3.89□□□□□ -1.79
CHD3-213ENST00000571249 NCR3O14931 201 aa3.89□□□□□ -1.79
CHD3-213ENST00000571249 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
CHD3-213ENST00000571249 C9orf129Q5T035 196 aaKnown RBP3.89□□□□□ -1.79
CHD3-213ENST00000571249 XAGE1AQ9HD64 81 aa3.89□□□□□ -1.79
CHD3-213ENST00000571249 TRBV10-3A0A0K0K1G6 114 aa3.88□□□□□ -1.79
CHD3-213ENST00000571249 TEX49A0A1B0GTD5 131 aa3.88□□□□□ -1.79
CHD3-213ENST00000571249 H3BQ85 93 aa3.88□□□□□ -1.79
CHD3-213ENST00000571249 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
CHD3-213ENST00000571249 LINC00575Q6W349 94 aa3.88□□□□□ -1.79
CHD3-213ENST00000571249 VPS25Q9BRG1 176 aa3.88□□□□□ -1.79
CHD3-213ENST00000571249 TRAV23DV6A0A075B6W5 121 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 ZNF861PO60384 105 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 SNCGO76070 127 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 DNAL4O96015 105 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 CXCL6P80162 114 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 KCNQ1DNQ9H478 68 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 ANAPC11Q9NYG5 84 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
CHD3-213ENST00000571249 FAM168BA1KXE4 195 aa3.86□□□□□ -1.79
CHD3-213ENST00000571249 ZNF73O43830 326 aaPredicted RBP3.86□□□□□ -1.79
CHD3-213ENST00000571249 ELOF1P60002 83 aaKnown RBP3.86□□□□□ -1.79
CHD3-213ENST00000571249 UBE2BP63146 152 aa3.86□□□□□ -1.79
CHD3-213ENST00000571249 KRTAP13-2Q52LG2 175 aa3.86□□□□□ -1.79
CHD3-213ENST00000571249 hADV29S1A0JD25 119 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 TMEM256-PLSCR3K7ERE1 68 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 ACYP1P07311 99 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 COX7BP24311 80 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 SPRR1AP35321 89 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
CHD3-213ENST00000571249 FP248Q71RG6 208 aaPredicted RBP3.85□□□□□ -1.79
CHD3-213ENST00000571249 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
CHD3-213ENST00000571249 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
CHD3-213ENST00000571249 JMJD7-PLA2G4BH0Y9G9 81 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms