RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TAL2Q16559 108 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 SPATA45Q537H7 98 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 PHF5AQ7RTV0 110 aaKnown RBP2.26□□□□□ -2.05
NUP88-202ENST00000570937 MRPL55Q7Z7F7 128 aaKnown RBP2.26□□□□□ -2.05
NUP88-202ENST00000570937 DIRC1Q969H9 104 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 PLEKHB2Q96CS7 222 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 PSORS1C2Q9UIG4 136 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
NUP88-202ENST00000570937 HERC1Q15751 4861 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 J3QQQ9 107 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 IGKCP01834 107 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 IGLV7-43P04211 117 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 LGALS3P17931 250 aaKnown RBP2.25□□□□□ -2.05
NUP88-202ENST00000570937 NMUP48645 174 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 HINT1P49773 126 aaPredicted RBP2.25□□□□□ -2.05
NUP88-202ENST00000570937 CD164Q04900 197 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 MEIG1Q5JSS6 88 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 BVES-AS1Q5T3Y7 98 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 ZNF625Q96I27 306 aaPredicted RBP2.25□□□□□ -2.05
NUP88-202ENST00000570937 SND1-IT1Q9HBX3 110 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 NDUFA12Q9UI09 145 aa2.25□□□□□ -2.05
NUP88-202ENST00000570937 SYS1-DBNDD2H3BUS1 97 aa2.24□□□□□ -2.05
NUP88-202ENST00000570937 LEPROTO15243 131 aa2.24□□□□□ -2.05
NUP88-202ENST00000570937 BCE1O60756 84 aa2.24□□□□□ -2.05
NUP88-202ENST00000570937 IFITM1P13164 125 aa2.24□□□□□ -2.05
NUP88-202ENST00000570937 RPL28P46779 137 aaKnown RBP2.24□□□□□ -2.05
NUP88-202ENST00000570937 C1orf195Q5TG92 126 aa2.24□□□□□ -2.05
NUP88-202ENST00000570937 LINC01600Q96MT4 127 aa2.24□□□□□ -2.05
NUP88-202ENST00000570937 IGKV2D-26A0A0A0MRZ7 120 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 A0A1W2PPM0 123 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 M0R378 163 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 SMIM13P0DJ93 91 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 FABP2P12104 132 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 UBE2AP49459 152 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 KRTDAPP60985 99 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 LINC01545Q5VT33 79 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 FAM19A1Q7Z5A9 133 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 LAMTOR3Q9UHA4 124 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 MYCBP2O75592 4640 aa2.23□□□□□ -2.05
NUP88-202ENST00000570937 VPS13BQ7Z7G8 4022 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 IGLV1-50A0A075B6I6 118 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 H3BMG7 143 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 NDUFC2O95298 119 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 RPL13AP40429 203 aaKnown RBP2.22□□□□□ -2.05
NUP88-202ENST00000570937 TMEM258P61165 79 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 C4orf26Q17RF5 130 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 SLC25A34Q6PIV7 304 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 ATOH7Q8N100 152 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 COPS9Q8WXC6 57 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 RAB37Q96AX2 223 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 IMUPQ9GZP8 106 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 SPCS1Q9Y6A9 102 aa2.22□□□□□ -2.05
NUP88-202ENST00000570937 DMBT1Q9UGM3 2413 aaPredicted RBP2.21□□□□□ -2.06
NUP88-202ENST00000570937 LOC107984156A0A0G2JMH3 177 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 TRBV10-2A0A0K0K1G8 114 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 UQCRQO14949 82 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 C3orf79P0CE67 100 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 SCGB1D4Q6XE38 83 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 ARL17AQ8IVW1 177 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 HIST1H4GQ99525 98 aa2.21□□□□□ -2.06
NUP88-202ENST00000570937 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
NUP88-202ENST00000570937 A0A0U1RQV1 116 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 ETDCA0A1B0GVM5 59 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 ZNF815PA8K554 130 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 NCR3O14931 201 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 TIMM17BO60830 172 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 SNCGO76070 127 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 MT-ATP8P03928 68 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 MT1HL1P0DM35 61 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 CRYGAP11844 174 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 TSPEAR-AS2P59090 65 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 Q5XG85 94 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 PPDPFLQ8WWR9 84 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 KCNQ1DNQ9H478 68 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 ZNF706Q9Y5V0 76 aaPredicted RBP2.2□□□□□ -2.06
NUP88-202ENST00000570937 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
NUP88-202ENST00000570937 TRBV7-7A0A0K0K1E9 115 aa2.19□□□□□ -2.06
NUP88-202ENST00000570937 PRLHP81277 87 aa2.19□□□□□ -2.06
NUP88-202ENST00000570937 FAM229BQ4G0N7 80 aa2.19□□□□□ -2.06
NUP88-202ENST00000570937 LINC00337Q8N6G1 96 aa2.19□□□□□ -2.06
NUP88-202ENST00000570937 DAND5Q8N907 189 aa2.19□□□□□ -2.06
NUP88-202ENST00000570937 HIGD2AQ9BW72 106 aa2.19□□□□□ -2.06
NUP88-202ENST00000570937 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
NUP88-202ENST00000570937 TRBV10-3A0A0K0K1G6 114 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 FAM240AA0A1B0GVK7 77 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 H3BUT2 72 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 COX8AP10176 69 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 PMAIP1Q13794 54 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 LYRM7Q5U5X0 104 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 LINC00308Q8TCZ7 52 aa2.18□□□□□ -2.06
NUP88-202ENST00000570937 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 TRAV23DV6A0A075B6W5 121 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 FAM236DA0A1B0GTK5 79 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 ZNF73O43830 326 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 692.3 ms