RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 TCL1BO95988 128 aa4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 GTF2H5Q6ZYL4 71 aa4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 FAM218AQ96MZ4 157 aa4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 LRP1BQ9NZR2 4599 aa4.01□□□□□ -1.77
CTDNEP1-204ENST00000570484 F8WEM9 126 aa4□□□□□ -1.77
CTDNEP1-204ENST00000570484 H3BQ85 93 aa4□□□□□ -1.77
CTDNEP1-204ENST00000570484 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
CTDNEP1-204ENST00000570484 DEFB105AQ8NG35 78 aa4□□□□□ -1.77
CTDNEP1-204ENST00000570484 K7EP34 96 aa3.99□□□□□ -1.77
CTDNEP1-204ENST00000570484 ERC2-IT1O76042 136 aa3.99□□□□□ -1.77
CTDNEP1-204ENST00000570484 PPDPFLQ8WWR9 84 aa3.99□□□□□ -1.77
CTDNEP1-204ENST00000570484 SPRR4Q96PI1 79 aa3.99□□□□□ -1.77
CTDNEP1-204ENST00000570484 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
CTDNEP1-204ENST00000570484 TEX49A0A1B0GTD5 131 aa3.98□□□□□ -1.77
CTDNEP1-204ENST00000570484 C9JAW5 83 aa3.98□□□□□ -1.77
CTDNEP1-204ENST00000570484 H3BMG7 143 aa3.98□□□□□ -1.77
CTDNEP1-204ENST00000570484 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
CTDNEP1-204ENST00000570484 LAMTOR3Q9UHA4 124 aa3.98□□□□□ -1.77
CTDNEP1-204ENST00000570484 IGLV5-48A0A075B6I7 105 aa3.97□□□□□ -1.77
CTDNEP1-204ENST00000570484 TMEM256-PLSCR3K7ERE1 68 aa3.97□□□□□ -1.77
CTDNEP1-204ENST00000570484 KRTAP10-4P60372 401 aaPredicted RBP3.97□□□□□ -1.77
CTDNEP1-204ENST00000570484 C9orf153Q5TBE3 101 aa3.97□□□□□ -1.77
CTDNEP1-204ENST00000570484 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
CTDNEP1-204ENST00000570484 IGLV9-49A0A0B4J1Y8 123 aa3.96□□□□□ -1.78
CTDNEP1-204ENST00000570484 H3BT86 120 aa3.96□□□□□ -1.78
CTDNEP1-204ENST00000570484 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
CTDNEP1-204ENST00000570484 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
CTDNEP1-204ENST00000570484 MTURNQ8N3F0 131 aa3.96□□□□□ -1.78
CTDNEP1-204ENST00000570484 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 A0A1B0GV72 72 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 A0A1B0GV90 55 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 BAALC-AS2P0C853 105 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 CRYGAP11844 174 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 SPRR1BP22528 89 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
CTDNEP1-204ENST00000570484 MOBPQ13875 183 aa3.94□□□□□ -1.78
CTDNEP1-204ENST00000570484 Q8N377 158 aa3.94□□□□□ -1.78
CTDNEP1-204ENST00000570484 C3orf22Q8N5N4 141 aa3.94□□□□□ -1.78
CTDNEP1-204ENST00000570484 ANKRD29Q8N6D5 301 aa3.94□□□□□ -1.78
CTDNEP1-204ENST00000570484 Q8NBF4 154 aa3.94□□□□□ -1.78
CTDNEP1-204ENST00000570484 ANAPC11Q9NYG5 84 aa3.94□□□□□ -1.78
CTDNEP1-204ENST00000570484 NDUFV3P56181 108 aaKnown RBP3.93□□□□□ -1.78
CTDNEP1-204ENST00000570484 LINC01547P58512 204 aaPredicted RBP3.93□□□□□ -1.78
CTDNEP1-204ENST00000570484 UBE2V1Q13404 147 aa3.93□□□□□ -1.78
CTDNEP1-204ENST00000570484 F8W1H4 67 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 JMJD7-PLA2G4BH0Y9G9 81 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 Q6JHZ5 121 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 HSPG2P98160 4391 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
CTDNEP1-204ENST00000570484 A0A087X002 238 aa3.91□□□□□ -1.78
CTDNEP1-204ENST00000570484 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
CTDNEP1-204ENST00000570484 DSCR8Q96T75 97 aa3.91□□□□□ -1.78
CTDNEP1-204ENST00000570484 RYR1P21817 5038 aa3.9□□□□□ -1.78
CTDNEP1-204ENST00000570484 OXTP01178 125 aa3.9□□□□□ -1.79
CTDNEP1-204ENST00000570484 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.79
CTDNEP1-204ENST00000570484 SMIM29Q86T20 159 aa3.9□□□□□ -1.79
CTDNEP1-204ENST00000570484 LINC01600Q96MT4 127 aa3.9□□□□□ -1.79
CTDNEP1-204ENST00000570484 SSBP3-AS1Q7Z2R9 100 aa3.89□□□□□ -1.79
CTDNEP1-204ENST00000570484 TEN1Q86WV5 123 aa3.89□□□□□ -1.79
CTDNEP1-204ENST00000570484 VPS25Q9BRG1 176 aa3.89□□□□□ -1.79
CTDNEP1-204ENST00000570484 C14orf132Q9NPU4 83 aa3.89□□□□□ -1.79
CTDNEP1-204ENST00000570484 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
CTDNEP1-204ENST00000570484 IGLV8-61A0A075B6I0 122 aa3.88□□□□□ -1.79
CTDNEP1-204ENST00000570484 PDE6GP18545 87 aa3.88□□□□□ -1.79
CTDNEP1-204ENST00000570484 KRTAP13-2Q52LG2 175 aa3.88□□□□□ -1.79
CTDNEP1-204ENST00000570484 IGFL1Q6UW32 110 aa3.88□□□□□ -1.79
CTDNEP1-204ENST00000570484 LINC00304Q8N9R0 145 aa3.88□□□□□ -1.79
CTDNEP1-204ENST00000570484 FAT1Q14517 4588 aa3.87□□□□□ -1.79
CTDNEP1-204ENST00000570484 CCKP06307 115 aa3.87□□□□□ -1.79
CTDNEP1-204ENST00000570484 ETDBQ3ZM63 59 aa3.87□□□□□ -1.79
CTDNEP1-204ENST00000570484 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
CTDNEP1-204ENST00000570484 LOC110117498A0A087WWA1 95 aa3.86□□□□□ -1.79
CTDNEP1-204ENST00000570484 TRBV7-4A0A0J9YYF1 115 aa3.86□□□□□ -1.79
CTDNEP1-204ENST00000570484 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
CTDNEP1-204ENST00000570484 HRCT1Q6UXD1 115 aa3.86□□□□□ -1.79
CTDNEP1-204ENST00000570484 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
CTDNEP1-204ENST00000570484 CD164Q04900 197 aa3.85□□□□□ -1.79
CTDNEP1-204ENST00000570484 OBSCN-AS1Q96MR7 158 aa3.85□□□□□ -1.79
CTDNEP1-204ENST00000570484 SS18L2Q9UHA2 77 aa3.85□□□□□ -1.79
CTDNEP1-204ENST00000570484 SRRM2Q9UQ35 2752 aaKnown RBP3.84□□□□□ -1.79
CTDNEP1-204ENST00000570484 A0A0G2JQZ4 141 aa3.84□□□□□ -1.79
CTDNEP1-204ENST00000570484 SPINK1P00995 79 aa3.84□□□□□ -1.79
CTDNEP1-204ENST00000570484 Q6ZQT0 140 aa3.84□□□□□ -1.79
CTDNEP1-204ENST00000570484 HERC2O95714 4834 aa3.84□□□□□ -1.79
CTDNEP1-204ENST00000570484 VPS13BQ7Z7G8 4022 aa3.84□□□□□ -1.8
CTDNEP1-204ENST00000570484 A0A087WSZ3 146 aa3.83□□□□□ -1.8
CTDNEP1-204ENST00000570484 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
CTDNEP1-204ENST00000570484 J3QR89 54 aa3.83□□□□□ -1.8
CTDNEP1-204ENST00000570484 Q6Q795 121 aa3.83□□□□□ -1.8
CTDNEP1-204ENST00000570484 A0A1B0GW54 56 aa3.82□□□□□ -1.8
CTDNEP1-204ENST00000570484 A0A1W2PNM2 257 aa3.82□□□□□ -1.8
CTDNEP1-204ENST00000570484 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
CTDNEP1-204ENST00000570484 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms