RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 LAMTOR3Q9UHA4 124 aa2.12□□□□□ -2.07
UBR1-211ENST00000569971 CCDC168Q8NDH2 2452 aa2.12□□□□□ -2.07
UBR1-211ENST00000569971 GCN1Q92616 2671 aaKnown RBP2.11□□□□□ -2.07
UBR1-211ENST00000569971 ITPR2Q14571 2701 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 LOC110117498A0A087WWA1 95 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 CCDC179H3BU77 68 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 UQCRQO14949 82 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 ZNF73O43830 326 aaPredicted RBP2.11□□□□□ -2.07
UBR1-211ENST00000569971 PRB2P02812 416 aaPredicted RBP2.11□□□□□ -2.07
UBR1-211ENST00000569971 ELOF1P60002 83 aaKnown RBP2.11□□□□□ -2.07
UBR1-211ENST00000569971 KRTAP26-1Q6PEX3 210 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 Q6ZQY7 126 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 Q6ZRU5 148 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 Q8NDZ9 215 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 LINC00846Q9NV44 126 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 NIPBLQ6KC79 2804 aaeCLIP2.11□□□□□ -2.07
UBR1-211ENST00000569971 FASNP49327 2511 aaKnown RBP2.11□□□□□ -2.07
UBR1-211ENST00000569971 OTOGQ6ZRI0 2925 aa2.11□□□□□ -2.07
UBR1-211ENST00000569971 IGKV3D-7A0A0C4DH55 119 aa2.1□□□□□ -2.07
UBR1-211ENST00000569971 C16orf90A8MZG2 172 aa2.1□□□□□ -2.07
UBR1-211ENST00000569971 HIST1H4AP62805 103 aaKnown RBP2.1□□□□□ -2.07
UBR1-211ENST00000569971 C9orf153Q5TBE3 101 aa2.1□□□□□ -2.07
UBR1-211ENST00000569971 Q6ZQT0 140 aa2.1□□□□□ -2.07
UBR1-211ENST00000569971 C3orf22Q8N5N4 141 aa2.1□□□□□ -2.07
UBR1-211ENST00000569971 HELZ2Q9BYK8 2649 aaKnown RBP2.09□□□□□ -2.07
UBR1-211ENST00000569971 ACANP16112 2415 aa2.09□□□□□ -2.07
UBR1-211ENST00000569971 ANK3Q12955 4377 aaKnown RBP2.09□□□□□ -2.07
UBR1-211ENST00000569971 COX7CP15954 63 aa2.09□□□□□ -2.07
UBR1-211ENST00000569971 SERP2Q8N6R1 65 aa2.09□□□□□ -2.07
UBR1-211ENST00000569971 TM2D3Q9BRN9 247 aa2.09□□□□□ -2.07
UBR1-211ENST00000569971 SS18L2Q9UHA2 77 aa2.09□□□□□ -2.07
UBR1-211ENST00000569971 LINC00588Q9Y4M8 146 aa2.09□□□□□ -2.07
UBR1-211ENST00000569971 MTORP42345 2549 aa2.09□□□□□ -2.08
UBR1-211ENST00000569971 JMJD1CQ15652 2540 aa2.09□□□□□ -2.08
UBR1-211ENST00000569971 NSD1Q96L73 2696 aaPredicted RBP2.08□□□□□ -2.08
UBR1-211ENST00000569971 LOC107984640A0A0U1RRK4 108 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 ETDCA0A1B0GVM5 59 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 C8orf87E5RJ46 101 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 BCE1O60756 84 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 HAMPP81172 84 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 SMIM20Q8N5G0 67 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 UPK3BQ9BT76 320 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 KCNQ1DNQ9H478 68 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 PKIGQ9Y2B9 76 aa2.08□□□□□ -2.08
UBR1-211ENST00000569971 SETD2Q9BYW2 2564 aaPredicted RBP2.07□□□□□ -2.08
UBR1-211ENST00000569971 TEP1Q99973 2627 aaKnown RBP2.07□□□□□ -2.08
UBR1-211ENST00000569971 HECTD1Q9ULT8 2610 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 A0A087WVE0 104 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 TRBV7-4A0A0J9YYF1 115 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 A0A1B0GW54 56 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 K7EIL1 84 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 PSCAO43653 123 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 IGLV7-43P04211 117 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 CRYGAP11844 174 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 TENM1Q9UKZ4 2725 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 FN1P02751 2386 aaKnown RBP2.07□□□□□ -2.08
UBR1-211ENST00000569971 C2CD3Q4AC94 2353 aa2.07□□□□□ -2.08
UBR1-211ENST00000569971 ZNF469Q96JG9 3925 aaPredicted RBP2.07□□□□□ -2.08
UBR1-211ENST00000569971 NBEAL2Q6ZNJ1 2754 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 VWFP04275 2813 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 CUBNO60494 3623 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 FUSP35637 526 aaKnown RBP eCLIP2.06□□□□□ -2.08
UBR1-211ENST00000569971 Q6ZRX8 168 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 FAM19A5Q7Z5A7 132 aaPredicted RBP2.06□□□□□ -2.08
UBR1-211ENST00000569971 DEFB105AQ8NG35 78 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 HIVEP1P15822 2718 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 AKAP9Q99996 3911 aa2.06□□□□□ -2.08
UBR1-211ENST00000569971 TRAV7A0A075B6U4 112 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 F8WEM9 126 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 SPRR1AP35321 89 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 TMEM258P61165 79 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 CNBPP62633 177 aaKnown RBP2.05□□□□□ -2.08
UBR1-211ENST00000569971 UBE2BP63146 152 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 NREPQ16612 68 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 KRTAP13-2Q52LG2 175 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 IGFL1Q6UW32 110 aa2.05□□□□□ -2.08
UBR1-211ENST00000569971 IGLV5-48A0A075B6I7 105 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 NUPR2A6NF83 97 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 J3KT08 172 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 K7ERS5 55 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 M0R2N4 97 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 ATRQ13535 2644 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 B9D2Q9BPU9 175 aa2.04□□□□□ -2.08
UBR1-211ENST00000569971 IGKV2-24A0A0C4DH68 120 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 C3orf84H3BNL1 204 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 NDUFC1O43677 76 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 MP68P56378 58 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 RPS28P62857 69 aaKnown RBP2.03□□□□□ -2.08
UBR1-211ENST00000569971 C1orf137Q5JT78 98 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 SCXQ7RTU7 201 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 C20orf197Q8N268 126 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 Q9BRP9 147 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 LINC00474Q9P2X8 69 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 APLNQ9ULZ1 77 aa2.03□□□□□ -2.08
UBR1-211ENST00000569971 NBPF19A0A087WUL8 3843 aa2.02□□□□□ -2.09
UBR1-211ENST00000569971 A0A096LNI7 61 aa2.02□□□□□ -2.09
UBR1-211ENST00000569971 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms