RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 DEFB119Q8N690 84 aa1.33□□□□□ -2.2
TNRC6A-218ENST00000569634 NOP10Q9NPE3 64 aaKnown RBP1.33□□□□□ -2.2
TNRC6A-218ENST00000569634 PRO0255Q9UI72 69 aa1.33□□□□□ -2.2
TNRC6A-218ENST00000569634 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
TNRC6A-218ENST00000569634 SPRR1AP35321 89 aa1.32□□□□□ -2.2
TNRC6A-218ENST00000569634 C10orf95Q9H7T3 257 aa1.32□□□□□ -2.2
TNRC6A-218ENST00000569634 COL6A6A6NMZ7 2263 aa1.32□□□□□ -2.2
TNRC6A-218ENST00000569634 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
TNRC6A-218ENST00000569634 ALMS1Q8TCU4 4167 aa1.31□□□□□ -2.2
TNRC6A-218ENST00000569634 PIEZO2Q9H5I5 2752 aa1.3□□□□□ -2.2
TNRC6A-218ENST00000569634 JMJD1CQ15652 2540 aa1.3□□□□□ -2.2
TNRC6A-218ENST00000569634 SPRR1BP22528 89 aa1.3□□□□□ -2.2
TNRC6A-218ENST00000569634 DEFB105AQ8NG35 78 aa1.3□□□□□ -2.2
TNRC6A-218ENST00000569634 PTPRZ1P23471 2315 aaPredicted RBP1.3□□□□□ -2.2
TNRC6A-218ENST00000569634 A8MTW9 85 aa1.29□□□□□ -2.2
TNRC6A-218ENST00000569634 DEFB108AA8MXU0 73 aa1.29□□□□□ -2.2
TNRC6A-218ENST00000569634 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
TNRC6A-218ENST00000569634 LELP1Q5T871 98 aa1.29□□□□□ -2.2
TNRC6A-218ENST00000569634 APLNQ9ULZ1 77 aa1.29□□□□□ -2.2
TNRC6A-218ENST00000569634 PKDREJQ9NTG1 2253 aa1.29□□□□□ -2.2
TNRC6A-218ENST00000569634 S4R3F8 94 aa1.28□□□□□ -2.2
TNRC6A-218ENST00000569634 ZDBF2Q9HCK1 2354 aa1.28□□□□□ -2.2
TNRC6A-218ENST00000569634 H3BUX3 64 aa1.27□□□□□ -2.21
TNRC6A-218ENST00000569634 PRLHP81277 87 aa1.27□□□□□ -2.21
TNRC6A-218ENST00000569634 PCNX1Q96RV3 2341 aa1.26□□□□□ -2.21
TNRC6A-218ENST00000569634 ROS1P08922 2347 aa1.26□□□□□ -2.21
TNRC6A-218ENST00000569634 IGF2RP11717 2491 aa1.25□□□□□ -2.21
TNRC6A-218ENST00000569634 ZNF462Q96JM2 2506 aa1.24□□□□□ -2.21
TNRC6A-218ENST00000569634 J3QKU1 62 aa1.24□□□□□ -2.21
TNRC6A-218ENST00000569634 DEFB104AQ8WTQ1 72 aa1.23□□□□□ -2.21
TNRC6A-218ENST00000569634 COX14Q96I36 57 aa1.23□□□□□ -2.21
TNRC6A-218ENST00000569634 H0YGG7 62 aa1.22□□□□□ -2.21
TNRC6A-218ENST00000569634 BAHCC1Q9P281 2608 aa1.22□□□□□ -2.21
TNRC6A-218ENST00000569634 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
TNRC6A-218ENST00000569634 M0QZ58 72 aa1.21□□□□□ -2.22
TNRC6A-218ENST00000569634 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
TNRC6A-218ENST00000569634 CACNA1HO95180 2353 aa1.2□□□□□ -2.22
TNRC6A-218ENST00000569634 C2CD3Q4AC94 2353 aa1.2□□□□□ -2.22
TNRC6A-218ENST00000569634 CSPG4Q6UVK1 2322 aa1.19□□□□□ -2.22
TNRC6A-218ENST00000569634 AKAP6Q13023 2319 aa1.18□□□□□ -2.22
TNRC6A-218ENST00000569634 SPTBN2O15020 2390 aa1.18□□□□□ -2.22
TNRC6A-218ENST00000569634 SPINK1P00995 79 aa1.18□□□□□ -2.22
TNRC6A-218ENST00000569634 KRTAP12-1P59990 96 aa1.18□□□□□ -2.22
TNRC6A-218ENST00000569634 RHPN1-AS1Q9BWJ2 59 aa1.17□□□□□ -2.22
TNRC6A-218ENST00000569634 ABCA2Q9BZC7 2435 aa1.17□□□□□ -2.22
TNRC6A-218ENST00000569634 SPTA1P02549 2419 aa1.16□□□□□ -2.22
TNRC6A-218ENST00000569634 SPTBN1Q01082 2364 aaKnown RBP1.15□□□□□ -2.22
TNRC6A-218ENST00000569634 STATHP02808 62 aa1.15□□□□□ -2.23
TNRC6A-218ENST00000569634 DSPP15924 2871 aaKnown RBP1.15□□□□□ -2.23
TNRC6A-218ENST00000569634 ACACAQ13085 2346 aa1.14□□□□□ -2.23
TNRC6A-218ENST00000569634 A0A0C4DFX4 3053 aa1.14□□□□□ -2.23
TNRC6A-218ENST00000569634 A0A0D9SG42 100 aa1.14□□□□□ -2.23
TNRC6A-218ENST00000569634 APELAP0DMC3 54 aa1.14□□□□□ -2.23
TNRC6A-218ENST00000569634 Q9Y3F1 56 aa1.14□□□□□ -2.23
TNRC6A-218ENST00000569634 REV3LO60673 3130 aa1.13□□□□□ -2.23
TNRC6A-218ENST00000569634 F8P00451 2351 aa1.13□□□□□ -2.23
TNRC6A-218ENST00000569634 MEGF8Q7Z7M0 2845 aa1.11□□□□□ -2.23
TNRC6A-218ENST00000569634 ABCA12Q86UK0 2595 aa1.09□□□□□ -2.23
TNRC6A-218ENST00000569634 TRANK1O15050 2925 aa1.09□□□□□ -2.23
TNRC6A-218ENST00000569634 PKD1L2Q7Z442 2459 aa1.09□□□□□ -2.23
TNRC6A-218ENST00000569634 DEFB124Q8NES8 71 aa1.09□□□□□ -2.23
TNRC6A-218ENST00000569634 CELSR2Q9HCU4 2923 aa1.09□□□□□ -2.23
TNRC6A-218ENST00000569634 CEP290O15078 2479 aa1.08□□□□□ -2.24
TNRC6A-218ENST00000569634 HTN1P15515 57 aa1.08□□□□□ -2.24
TNRC6A-218ENST00000569634 DEFB1P60022 68 aa1.08□□□□□ -2.24
TNRC6A-218ENST00000569634 UBR5O95071 2799 aaPredicted RBP1.08□□□□□ -2.24
TNRC6A-218ENST00000569634 GVINP1Q7Z2Y8 2422 aa1.07□□□□□ -2.24
TNRC6A-218ENST00000569634 ASH1LQ9NR48 2969 aaKnown RBP1.07□□□□□ -2.24
TNRC6A-218ENST00000569634 TNP1P09430 55 aa1.07□□□□□ -2.24
TNRC6A-218ENST00000569634 CEP250Q9BV73 2442 aa1.07□□□□□ -2.24
TNRC6A-218ENST00000569634 APC2O95996 2303 aa1.06□□□□□ -2.24
TNRC6A-218ENST00000569634 RP1L1Q8IWN7 2480 aaPredicted RBP1.06□□□□□ -2.24
TNRC6A-218ENST00000569634 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
TNRC6A-218ENST00000569634 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
TNRC6A-218ENST00000569634 CREBBPQ92793 2442 aa1.06□□□□□ -2.24
TNRC6A-218ENST00000569634 CHD7Q9P2D1 2997 aa1.05□□□□□ -2.24
TNRC6A-218ENST00000569634 PRRC2CQ9Y520 2896 aaKnown RBP1.05□□□□□ -2.24
TNRC6A-218ENST00000569634 H3BNG1 76 aa1.05□□□□□ -2.24
TNRC6A-218ENST00000569634 DEFB108BQ8NET1 73 aa1.05□□□□□ -2.24
TNRC6A-218ENST00000569634 SPTBN4Q9H254 2564 aa1.04□□□□□ -2.24
TNRC6A-218ENST00000569634 DEFB135Q30KP9 77 aa1.04□□□□□ -2.24
TNRC6A-218ENST00000569634 MAP1BP46821 2468 aaKnown RBP1.04□□□□□ -2.24
TNRC6A-218ENST00000569634 SETD2Q9BYW2 2564 aaPredicted RBP1.03□□□□□ -2.24
TNRC6A-218ENST00000569634 HECTD1Q9ULT8 2610 aa1.03□□□□□ -2.24
TNRC6A-218ENST00000569634 NAV2Q8IVL1 2488 aa1.03□□□□□ -2.24
TNRC6A-218ENST00000569634 SPART-AS1P0CW21 52 aa1.03□□□□□ -2.24
TNRC6A-218ENST00000569634 DEFB110Q30KQ9 67 aa1.03□□□□□ -2.24
TNRC6A-218ENST00000569634 TENM2Q9NT68 2774 aa1.03□□□□□ -2.24
TNRC6A-218ENST00000569634 EP300Q09472 2414 aaPredicted RBP1.03□□□□□ -2.25
TNRC6A-218ENST00000569634 TTC28Q96AY4 2481 aa1.03□□□□□ -2.25
TNRC6A-218ENST00000569634 MGAQ8IWI9 3026 aa1.02□□□□□ -2.25
TNRC6A-218ENST00000569634 NBASA2RRP1 2371 aa1.02□□□□□ -2.25
TNRC6A-218ENST00000569634 OTOGQ6ZRI0 2925 aa1.02□□□□□ -2.25
TNRC6A-218ENST00000569634 NCOR1O75376 2440 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 VWFP04275 2813 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 SRRM2Q9UQ35 2752 aaKnown RBP1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 ZNF292O60281 2723 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 M0R2T5 61 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 LINC01556Q5JQF7 62 aa1.01□□□□□ -2.25
TNRC6A-218ENST00000569634 DMBT1Q9UGM3 2413 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms