RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
LINC00559-201ENST00000569476 PRLHP81277 87 aa4.86□□□□□ -1.63
LINC00559-201ENST00000569476 SCXQ7RTU7 201 aa4.86□□□□□ -1.63
LINC00559-201ENST00000569476 HIGD2AQ9BW72 106 aa4.86□□□□□ -1.63
LINC00559-201ENST00000569476 A8MWP4 228 aa4.85□□□□□ -1.63
LINC00559-201ENST00000569476 RTL8CO15255 209 aa4.85□□□□□ -1.63
LINC00559-201ENST00000569476 NDUFB1O75438 58 aa4.84□□□□□ -1.63
LINC00559-201ENST00000569476 CD164Q04900 197 aa4.84□□□□□ -1.63
LINC00559-201ENST00000569476 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
LINC00559-201ENST00000569476 IGLV5-52A0A0A0MRZ9 124 aa4.84□□□□□ -1.64
LINC00559-201ENST00000569476 C1orf134Q5TEV5 83 aa4.84□□□□□ -1.64
LINC00559-201ENST00000569476 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.64
LINC00559-201ENST00000569476 NBEAL2Q6ZNJ1 2754 aa4.84□□□□□ -1.64
LINC00559-201ENST00000569476 TRRAPQ9Y4A5 3859 aa4.83□□□□□ -1.64
LINC00559-201ENST00000569476 ZCCHC13Q8WW36 166 aaKnown RBP4.83□□□□□ -1.64
LINC00559-201ENST00000569476 PRR15Q8IV56 129 aa4.83□□□□□ -1.64
LINC00559-201ENST00000569476 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
LINC00559-201ENST00000569476 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
LINC00559-201ENST00000569476 CHTF8P0CG12 524 aa4.82□□□□□ -1.64
LINC00559-201ENST00000569476 K7EQZ3 153 aa4.82□□□□□ -1.64
LINC00559-201ENST00000569476 ZNF861PO60384 105 aa4.82□□□□□ -1.64
LINC00559-201ENST00000569476 FBN1P35555 2871 aaKnown RBP4.82□□□□□ -1.64
LINC00559-201ENST00000569476 A0A087WSZ3 146 aa4.81□□□□□ -1.64
LINC00559-201ENST00000569476 MOBPQ13875 183 aa4.81□□□□□ -1.64
LINC00559-201ENST00000569476 KRTAP11-1Q8IUC1 163 aa4.81□□□□□ -1.64
LINC00559-201ENST00000569476 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
LINC00559-201ENST00000569476 TP53AIP1Q9HCN2 124 aa4.8□□□□□ -1.64
LINC00559-201ENST00000569476 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
LINC00559-201ENST00000569476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.8□□□□□ -1.64
LINC00559-201ENST00000569476 MP68P56378 58 aa4.8□□□□□ -1.64
LINC00559-201ENST00000569476 Q8N9L7 120 aa4.8□□□□□ -1.64
LINC00559-201ENST00000569476 WWC2-AS2Q96NR7 200 aa4.8□□□□□ -1.64
LINC00559-201ENST00000569476 CYP4F30PQ9H0H9 118 aa4.79□□□□□ -1.64
LINC00559-201ENST00000569476 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
LINC00559-201ENST00000569476 TENM3Q9P273 2699 aa4.79□□□□□ -1.64
LINC00559-201ENST00000569476 hDV103S1A0JD37 113 aa4.79□□□□□ -1.64
LINC00559-201ENST00000569476 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
LINC00559-201ENST00000569476 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
LINC00559-201ENST00000569476 DNAH10Q8IVF4 4471 aa4.78□□□□□ -1.64
LINC00559-201ENST00000569476 SSBP3-AS1Q7Z2R9 100 aa4.78□□□□□ -1.64
LINC00559-201ENST00000569476 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
LINC00559-201ENST00000569476 CASC2Q6XLA1 102 aa4.77□□□□□ -1.65
LINC00559-201ENST00000569476 PANO1I0J062 215 aa4.77□□□□□ -1.65
LINC00559-201ENST00000569476 FAM229BQ4G0N7 80 aa4.77□□□□□ -1.65
LINC00559-201ENST00000569476 Q5XG85 94 aa4.77□□□□□ -1.65
LINC00559-201ENST00000569476 PSORS1C2Q9UIG4 136 aa4.77□□□□□ -1.65
LINC00559-201ENST00000569476 IGLV7-43P04211 117 aa4.76□□□□□ -1.65
LINC00559-201ENST00000569476 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
LINC00559-201ENST00000569476 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
LINC00559-201ENST00000569476 Q96NJ1 140 aa4.75□□□□□ -1.65
LINC00559-201ENST00000569476 MMP24-AS1A0A0U1RRL7 71 aa4.75□□□□□ -1.65
LINC00559-201ENST00000569476 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
LINC00559-201ENST00000569476 Q6ZSA8 131 aa4.74□□□□□ -1.65
LINC00559-201ENST00000569476 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
LINC00559-201ENST00000569476 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
LINC00559-201ENST00000569476 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
LINC00559-201ENST00000569476 OXTP01178 125 aa4.73□□□□□ -1.65
LINC00559-201ENST00000569476 PRKDCP78527 4128 aaKnown RBP4.73□□□□□ -1.65
LINC00559-201ENST00000569476 C8orf17Q9NRJ1 99 aa4.72□□□□□ -1.65
LINC00559-201ENST00000569476 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
LINC00559-201ENST00000569476 DNAH8Q96JB1 4490 aa4.71□□□□□ -1.65
LINC00559-201ENST00000569476 H0Y9P7 68 aa4.71□□□□□ -1.66
LINC00559-201ENST00000569476 V9GYY9 64 aa4.7□□□□□ -1.66
LINC00559-201ENST00000569476 PLECQ15149 4684 aaKnown RBP4.7□□□□□ -1.66
LINC00559-201ENST00000569476 WFDC13Q8IUB5 93 aa4.7□□□□□ -1.66
LINC00559-201ENST00000569476 DNAH2Q9P225 4427 aa4.69□□□□□ -1.66
LINC00559-201ENST00000569476 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
LINC00559-201ENST00000569476 LY6G6CO95867 125 aa4.68□□□□□ -1.66
LINC00559-201ENST00000569476 MRPL34Q9BQ48 92 aaKnown RBP4.68□□□□□ -1.66
LINC00559-201ENST00000569476 C1orf195Q5TG92 126 aa4.68□□□□□ -1.66
LINC00559-201ENST00000569476 LINC00336Q6ZUF6 198 aa4.68□□□□□ -1.66
LINC00559-201ENST00000569476 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
LINC00559-201ENST00000569476 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
LINC00559-201ENST00000569476 A0A0G2JQZ4 141 aa4.67□□□□□ -1.66
LINC00559-201ENST00000569476 LIMD2Q9BT23 127 aa4.67□□□□□ -1.66
LINC00559-201ENST00000569476 Q1T7F1 81 aa4.67□□□□□ -1.66
LINC00559-201ENST00000569476 C1orf64Q8NEQ6 169 aa4.66□□□□□ -1.66
LINC00559-201ENST00000569476 LOC101927531A0A1B0GV80 90 aa4.65□□□□□ -1.66
LINC00559-201ENST00000569476 IGLV7-46A0A075B6I9 117 aa4.65□□□□□ -1.67
LINC00559-201ENST00000569476 LINC00208Q96KT6 92 aa4.65□□□□□ -1.67
LINC00559-201ENST00000569476 DEFB116Q30KQ4 102 aa4.65□□□□□ -1.67
LINC00559-201ENST00000569476 CIRBP-AS1Q8TBR5 109 aa4.65□□□□□ -1.67
LINC00559-201ENST00000569476 FP248Q71RG6 208 aaPredicted RBP4.64□□□□□ -1.67
LINC00559-201ENST00000569476 COL6A5A8TX70 2615 aa4.63□□□□□ -1.67
LINC00559-201ENST00000569476 HECTD4Q9Y4D8 3996 aa4.62□□□□□ -1.67
LINC00559-201ENST00000569476 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
LINC00559-201ENST00000569476 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
LINC00559-201ENST00000569476 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
LINC00559-201ENST00000569476 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
LINC00559-201ENST00000569476 SPAG11AQ6PDA7 123 aa4.6□□□□□ -1.67
LINC00559-201ENST00000569476 SPINK6Q6UWN8 80 aa4.6□□□□□ -1.67
LINC00559-201ENST00000569476 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
LINC00559-201ENST00000569476 KRTAP10-1P60331 282 aa4.6□□□□□ -1.67
LINC00559-201ENST00000569476 FAM229AH3BQW9 127 aa4.59□□□□□ -1.67
LINC00559-201ENST00000569476 KRTAP13-3Q3SY46 172 aa4.59□□□□□ -1.67
LINC00559-201ENST00000569476 NOTCH1P46531 2555 aa4.59□□□□□ -1.68
LINC00559-201ENST00000569476 SPINK1P00995 79 aa4.58□□□□□ -1.68
LINC00559-201ENST00000569476 Q8N9P0 234 aaPredicted RBP4.58□□□□□ -1.68
LINC00559-201ENST00000569476 HRCT1Q6UXD1 115 aa4.58□□□□□ -1.68
LINC00559-201ENST00000569476 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms