RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 C21orf62-AS1Q17RA5 79 aa4.71□□□□□ -1.66
CDH13-214ENST00000569455 PDE6GP18545 87 aa4.7□□□□□ -1.66
CDH13-214ENST00000569455 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
CDH13-214ENST00000569455 Q8N377 158 aa4.7□□□□□ -1.66
CDH13-214ENST00000569455 ST20-AS1Q8NBB2 130 aa4.7□□□□□ -1.66
CDH13-214ENST00000569455 DSCR8Q96T75 97 aa4.7□□□□□ -1.66
CDH13-214ENST00000569455 C14orf132Q9NPU4 83 aa4.7□□□□□ -1.66
CDH13-214ENST00000569455 F8WEM9 126 aa4.69□□□□□ -1.66
CDH13-214ENST00000569455 ZNF861PO60384 105 aa4.69□□□□□ -1.66
CDH13-214ENST00000569455 IGLV7-43P04211 117 aa4.69□□□□□ -1.66
CDH13-214ENST00000569455 LINC01547P58512 204 aaPredicted RBP4.69□□□□□ -1.66
CDH13-214ENST00000569455 ZNF706Q9Y5V0 76 aaPredicted RBP4.69□□□□□ -1.66
CDH13-214ENST00000569455 A0A1B0GV72 72 aa4.68□□□□□ -1.66
CDH13-214ENST00000569455 FAM240AA0A1B0GVK7 77 aa4.68□□□□□ -1.66
CDH13-214ENST00000569455 ACYP1P07311 99 aa4.68□□□□□ -1.66
CDH13-214ENST00000569455 SPRR1BP22528 89 aa4.68□□□□□ -1.66
CDH13-214ENST00000569455 XGP55808 180 aa4.68□□□□□ -1.66
CDH13-214ENST00000569455 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
CDH13-214ENST00000569455 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
CDH13-214ENST00000569455 FAT1Q14517 4588 aa4.67□□□□□ -1.66
CDH13-214ENST00000569455 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
CDH13-214ENST00000569455 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
CDH13-214ENST00000569455 C4orf48Q5BLP8 95 aa4.67□□□□□ -1.66
CDH13-214ENST00000569455 GAGE2AQ6NT46 116 aa4.67□□□□□ -1.66
CDH13-214ENST00000569455 CCKP06307 115 aa4.66□□□□□ -1.66
CDH13-214ENST00000569455 HAMPP81172 84 aa4.66□□□□□ -1.66
CDH13-214ENST00000569455 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
CDH13-214ENST00000569455 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 FAM229AH3BQW9 127 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 Q6ZQT0 140 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 SMIM29Q86T20 159 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 C3orf22Q8N5N4 141 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 VPS25Q9BRG1 176 aa4.65□□□□□ -1.67
CDH13-214ENST00000569455 PLA2G1BP04054 148 aaKnown RBP4.63□□□□□ -1.67
CDH13-214ENST00000569455 LINC00483Q53H64 154 aa4.63□□□□□ -1.67
CDH13-214ENST00000569455 Q6JHZ5 121 aa4.63□□□□□ -1.67
CDH13-214ENST00000569455 IGLV8-61A0A075B6I0 122 aa4.62□□□□□ -1.67
CDH13-214ENST00000569455 RPL37AP61513 92 aaKnown RBP4.62□□□□□ -1.67
CDH13-214ENST00000569455 A0A1B0GW54 56 aa4.61□□□□□ -1.67
CDH13-214ENST00000569455 PCP4P48539 62 aa4.61□□□□□ -1.67
CDH13-214ENST00000569455 C9orf153Q5TBE3 101 aa4.6□□□□□ -1.67
CDH13-214ENST00000569455 Q8NBF4 154 aa4.6□□□□□ -1.67
CDH13-214ENST00000569455 CDIP1Q9H305 208 aa4.6□□□□□ -1.67
CDH13-214ENST00000569455 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 J3QL48 77 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 SMR3BP02814 79 aaPredicted RBP4.59□□□□□ -1.67
CDH13-214ENST00000569455 Q5VSD8 79 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 SPINK6Q6UWN8 80 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 UBL5Q9BZL1 73 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 LINC00846Q9NV44 126 aa4.59□□□□□ -1.67
CDH13-214ENST00000569455 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
CDH13-214ENST00000569455 FAM229BQ4G0N7 80 aa4.58□□□□□ -1.68
CDH13-214ENST00000569455 LINC00643Q86TS7 51 aa4.58□□□□□ -1.68
CDH13-214ENST00000569455 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
CDH13-214ENST00000569455 A0A1W2PNM2 257 aa4.57□□□□□ -1.68
CDH13-214ENST00000569455 CRYGAP11844 174 aa4.56□□□□□ -1.68
CDH13-214ENST00000569455 MOBPQ13875 183 aa4.56□□□□□ -1.68
CDH13-214ENST00000569455 ATP5EP2Q5VTU8 51 aa4.56□□□□□ -1.68
CDH13-214ENST00000569455 Q6Q795 121 aa4.56□□□□□ -1.68
CDH13-214ENST00000569455 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
CDH13-214ENST00000569455 NREPQ16612 68 aa4.55□□□□□ -1.68
CDH13-214ENST00000569455 SSBP3-AS1Q7Z2R9 100 aa4.55□□□□□ -1.68
CDH13-214ENST00000569455 ANAPC11Q9NYG5 84 aa4.55□□□□□ -1.68
CDH13-214ENST00000569455 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
CDH13-214ENST00000569455 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
CDH13-214ENST00000569455 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
CDH13-214ENST00000569455 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
CDH13-214ENST00000569455 Q6ZVQ6 151 aa4.54□□□□□ -1.68
CDH13-214ENST00000569455 A0A0G2JQZ4 141 aa4.53□□□□□ -1.68
CDH13-214ENST00000569455 A0A087WSZ3 146 aa4.52□□□□□ -1.69
CDH13-214ENST00000569455 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
CDH13-214ENST00000569455 CD164Q04900 197 aa4.52□□□□□ -1.69
CDH13-214ENST00000569455 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
CDH13-214ENST00000569455 SS18L2Q9UHA2 77 aa4.52□□□□□ -1.69
CDH13-214ENST00000569455 A0A087X002 238 aa4.51□□□□□ -1.69
CDH13-214ENST00000569455 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
CDH13-214ENST00000569455 CXCL6P80162 114 aa4.51□□□□□ -1.69
CDH13-214ENST00000569455 BPY2O14599 106 aa4.5□□□□□ -1.69
CDH13-214ENST00000569455 KRTAP13-2Q52LG2 175 aa4.5□□□□□ -1.69
CDH13-214ENST00000569455 OXTP01178 125 aa4.49□□□□□ -1.69
CDH13-214ENST00000569455 HRCT1Q6UXD1 115 aa4.49□□□□□ -1.69
CDH13-214ENST00000569455 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
CDH13-214ENST00000569455 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
CDH13-214ENST00000569455 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
CDH13-214ENST00000569455 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
CDH13-214ENST00000569455 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
CDH13-214ENST00000569455 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
CDH13-214ENST00000569455 J3KT08 172 aa4.46□□□□□ -1.7
CDH13-214ENST00000569455 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.7
CDH13-214ENST00000569455 LIMD2Q9BT23 127 aa4.46□□□□□ -1.7
CDH13-214ENST00000569455 SPAG11AQ6PDA7 123 aa4.45□□□□□ -1.7
CDH13-214ENST00000569455 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
CDH13-214ENST00000569455 LINC00472Q9H8W2 130 aa4.45□□□□□ -1.7
CDH13-214ENST00000569455 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
CDH13-214ENST00000569455 SPINK1P00995 79 aa4.44□□□□□ -1.7
CDH13-214ENST00000569455 ASB16-AS1Q495Z4 193 aa4.44□□□□□ -1.7
CDH13-214ENST00000569455 Q5XG85 94 aa4.44□□□□□ -1.7
CDH13-214ENST00000569455 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms