RNA–Protein interactions for RNA: ENST00000569141.1

ACSM3-214, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 5

Gene ACSM3, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-214ENST00000569141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.14□□□□□ -2.43
ACSM3-214ENST00000569141 DCAF1Q9Y4B6 1507 aa-0.14□□□□□ -2.43
ACSM3-214ENST00000569141 VPS13DQ5THJ4 4388 aa-0.15□□□□□ -2.43
ACSM3-214ENST00000569141 UMAD1C9J7I0 102 aa-0.15□□□□□ -2.43
ACSM3-214ENST00000569141 IFI27P40305 119 aaPredicted RBP-0.15□□□□□ -2.43
ACSM3-214ENST00000569141 ARFGEF2Q9Y6D5 1785 aa-0.15□□□□□ -2.43
ACSM3-214ENST00000569141 VPS13BQ7Z7G8 4022 aa-0.16□□□□□ -2.43
ACSM3-214ENST00000569141 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.43
ACSM3-214ENST00000569141 DNAH9Q9NYC9 4486 aa-0.16□□□□□ -2.43
ACSM3-214ENST00000569141 HIVEP1P15822 2718 aa-0.16□□□□□ -2.43
ACSM3-214ENST00000569141 CMYA5Q8N3K9 4069 aa-0.16□□□□□ -2.43
ACSM3-214ENST00000569141 PRRC2CQ9Y520 2896 aaKnown RBP-0.16□□□□□ -2.43
ACSM3-214ENST00000569141 A0A087WXM4 84 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 PRO3102Q9H379 93 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 SVEP1Q4LDE5 3571 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 NBASA2RRP1 2371 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 DNAH8Q96JB1 4490 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 DNHD1Q96M86 4753 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 RYR2Q92736 4967 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 ERVK-7P63135 1459 aa-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 APOBP04114 4563 aaKnown RBP-0.16□□□□□ -2.44
ACSM3-214ENST00000569141 KDM5DQ9BY66 1539 aa-0.17□□□□□ -2.44
ACSM3-214ENST00000569141 SPTBN4Q9H254 2564 aa-0.17□□□□□ -2.44
ACSM3-214ENST00000569141 H3BUT2 72 aa-0.17□□□□□ -2.44
ACSM3-214ENST00000569141 IFI6P09912 130 aa-0.17□□□□□ -2.44
ACSM3-214ENST00000569141 C3orf79P0CE67 100 aa-0.17□□□□□ -2.44
ACSM3-214ENST00000569141 ABCC1P33527 1531 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 SACSQ9NZJ4 4579 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 PLXNC1O60486 1568 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 LINC00158P58513 81 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 NREPQ16612 68 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 KRTAP19-7Q3SYF9 63 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 CFAP43Q8NDM7 1665 aa-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 DYNC1H1Q14204 4646 aaKnown RBP-0.18□□□□□ -2.44
ACSM3-214ENST00000569141 PLECQ15149 4684 aaKnown RBP-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 ABCA13Q86UQ4 5058 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 TNRC18O15417 2968 aaPredicted RBP-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 LCE6AA0A183 80 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 NDUFA4O00483 81 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 SMIM13P0DJ93 91 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 SPRR2AP35326 72 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 DEFB121Q5J5C9 76 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 ARHGAP35Q9NRY4 1499 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 CUBNO60494 3623 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 CFAP74Q9C0B2 1584 aa-0.19□□□□□ -2.44
ACSM3-214ENST00000569141 ITPR3Q14573 2671 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 TACC2O95359 2948 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 PLCH1Q4KWH8 1693 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 LAMA1P25391 3075 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 MT4P47944 62 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 DEFA5Q01523 94 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 KRTAP20-2Q3LI61 65 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 KRTAP6-2Q3LI66 62 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 BVES-AS1Q5T3Y7 98 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 DNAH11Q96DT5 4516 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 TRRAPQ9Y4A5 3859 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 DEPDC5O75140 1603 aa-0.2□□□□□ -2.44
ACSM3-214ENST00000569141 WIZO95785 1651 aa-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 DDX60LQ5H9U9 1706 aaKnown RBP-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 EPG5Q9HCE0 2579 aa-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 DNAH17Q9UFH2 4485 aa-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 SCN11AQ9UI33 1791 aa-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 RICTORQ6R327 1708 aa-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 ANKRD11Q6UB99 2663 aaPredicted RBP-0.21□□□□□ -2.44
ACSM3-214ENST00000569141 SPG11Q96JI7 2443 aa-0.22□□□□□ -2.44
ACSM3-214ENST00000569141 DNAH10Q8IVF4 4471 aa-0.22□□□□□ -2.44
ACSM3-214ENST00000569141 H0YAA0 97 aa-0.22□□□□□ -2.44
ACSM3-214ENST00000569141 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
ACSM3-214ENST00000569141 DNAH5Q8TE73 4624 aa-0.22□□□□□ -2.44
ACSM3-214ENST00000569141 DSPP15924 2871 aaKnown RBP-0.22□□□□□ -2.44
ACSM3-214ENST00000569141 RRBP1Q9P2E9 1410 aaKnown RBP-0.22□□□□□ -2.45
ACSM3-214ENST00000569141 MAP3K1Q13233 1512 aa-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 WDR87Q6ZQQ6 2873 aa-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 KALRNO60229 2985 aa-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 HMGA1P17096 107 aaKnown RBP-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 HTTP42858 3142 aa-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 HFM1A2PYH4 1435 aa-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 USP9YO00507 2555 aaPredicted RBP-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 NIPBLQ6KC79 2804 aaeCLIP-0.23□□□□□ -2.45
ACSM3-214ENST00000569141 ZZEF1O43149 2961 aa-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 SPENQ96T58 3664 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 SONP18583 2426 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 LAMA2P24043 3122 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 TEX15Q9BXT5 2789 aa-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 SMG1Q96Q15 3661 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 C18orf32Q8TCD1 76 aa-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 ANKRD50Q9ULJ7 1429 aa-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 THOC2Q8NI27 1593 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 UTP20O75691 2785 aaKnown RBP-0.24□□□□□ -2.45
ACSM3-214ENST00000569141 MYO18BQ8IUG5 2567 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 NBEAQ8NFP9 2946 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 A0A0C4DFX4 3053 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 COL12A1Q99715 3063 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 LYNX1G3V0Z9 82 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 SPRR2EP22531 72 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 ANKARQ7Z5J8 1434 aa-0.25□□□□□ -2.45
ACSM3-214ENST00000569141 RALGAPBQ86X10 1494 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms