RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 IGLV8-61A0A075B6I0 122 aa4.23□□□□□ -1.73
CDH3-209ENST00000569080 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
CDH3-209ENST00000569080 DLEU1O43261 78 aa4.23□□□□□ -1.73
CDH3-209ENST00000569080 C12orf57Q99622 126 aa4.23□□□□□ -1.73
CDH3-209ENST00000569080 hADV29S1A0JD25 119 aa4.22□□□□□ -1.73
CDH3-209ENST00000569080 SCGB1D1O95968 90 aa4.22□□□□□ -1.73
CDH3-209ENST00000569080 VAMP3Q15836 100 aa4.21□□□□□ -1.74
CDH3-209ENST00000569080 PCOTHQ58A44 107 aa4.21□□□□□ -1.74
CDH3-209ENST00000569080 IGFL1Q6UW32 110 aa4.21□□□□□ -1.74
CDH3-209ENST00000569080 C2orf91Q6ZV80 131 aa4.21□□□□□ -1.74
CDH3-209ENST00000569080 CLEC2BQ92478 149 aa4.21□□□□□ -1.74
CDH3-209ENST00000569080 HIST1H4GQ99525 98 aa4.21□□□□□ -1.74
CDH3-209ENST00000569080 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
CDH3-209ENST00000569080 CFC1P0CG37 223 aa4.2□□□□□ -1.74
CDH3-209ENST00000569080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.2□□□□□ -1.74
CDH3-209ENST00000569080 TRBV7-7A0A0K0K1E9 115 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 F8WEM9 126 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 BVES-AS1Q5T3Y7 98 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 Q6JHZ5 121 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 PPDPFLQ8WWR9 84 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 C14orf144Q96I85 54 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 HIGD1BQ9P298 99 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 PAM16Q9Y3D7 125 aa4.19□□□□□ -1.74
CDH3-209ENST00000569080 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
CDH3-209ENST00000569080 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
CDH3-209ENST00000569080 TCL1BO95988 128 aa4.18□□□□□ -1.74
CDH3-209ENST00000569080 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
CDH3-209ENST00000569080 SPATA45Q537H7 98 aa4.18□□□□□ -1.74
CDH3-209ENST00000569080 FAM218AQ96MZ4 157 aa4.18□□□□□ -1.74
CDH3-209ENST00000569080 MT1HP80294 61 aa4.17□□□□□ -1.74
CDH3-209ENST00000569080 OCIAD2Q56VL3 154 aa4.17□□□□□ -1.74
CDH3-209ENST00000569080 H3BUT2 72 aa4.16□□□□□ -1.74
CDH3-209ENST00000569080 VAMP8Q9BV40 100 aa4.16□□□□□ -1.74
CDH3-209ENST00000569080 FXYD2P54710 66 aa4.15□□□□□ -1.75
CDH3-209ENST00000569080 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
CDH3-209ENST00000569080 Q6Q795 121 aa4.14□□□□□ -1.75
CDH3-209ENST00000569080 CEND1Q8N111 149 aa4.14□□□□□ -1.75
CDH3-209ENST00000569080 RAB37Q96AX2 223 aa4.14□□□□□ -1.75
CDH3-209ENST00000569080 H0YGX0 51 aa4.13□□□□□ -1.75
CDH3-209ENST00000569080 PYY3Q5JQD4 70 aa4.13□□□□□ -1.75
CDH3-209ENST00000569080 SNHG12Q9BXW3 62 aa4.13□□□□□ -1.75
CDH3-209ENST00000569080 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
CDH3-209ENST00000569080 TRIAP1O43715 76 aa4.12□□□□□ -1.75
CDH3-209ENST00000569080 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
CDH3-209ENST00000569080 TMEM238LA0A1B0GVL6 79 aa4.11□□□□□ -1.75
CDH3-209ENST00000569080 A0A1B0GX51 115 aa4.11□□□□□ -1.75
CDH3-209ENST00000569080 Q75L30 129 aa4.11□□□□□ -1.75
CDH3-209ENST00000569080 OBSCN-AS1Q96MR7 158 aa4.11□□□□□ -1.75
CDH3-209ENST00000569080 Q96NJ1 140 aa4.11□□□□□ -1.75
CDH3-209ENST00000569080 PRO1854Q9UHT4 67 aa4.11□□□□□ -1.75
CDH3-209ENST00000569080 LST1O00453 97 aa4.1□□□□□ -1.75
CDH3-209ENST00000569080 LORP23490 312 aaPredicted RBP4.1□□□□□ -1.75
CDH3-209ENST00000569080 TEN1Q86WV5 123 aa4.1□□□□□ -1.75
CDH3-209ENST00000569080 A0A087WSZ3 146 aa4.09□□□□□ -1.75
CDH3-209ENST00000569080 K7ERJ3 54 aa4.09□□□□□ -1.75
CDH3-209ENST00000569080 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
CDH3-209ENST00000569080 HSD52Q0P140 79 aa4.09□□□□□ -1.75
CDH3-209ENST00000569080 SS18L2Q9UHA2 77 aa4.09□□□□□ -1.75
CDH3-209ENST00000569080 A0A1W2PNM2 257 aa4.08□□□□□ -1.76
CDH3-209ENST00000569080 H3BMG7 143 aa4.08□□□□□ -1.76
CDH3-209ENST00000569080 C20orf166-AS1Q96NR2 134 aa4.08□□□□□ -1.76
CDH3-209ENST00000569080 SNCGO76070 127 aa4.07□□□□□ -1.76
CDH3-209ENST00000569080 A8MUU9 505 aa4.06□□□□□ -1.76
CDH3-209ENST00000569080 FABP2P12104 132 aa4.06□□□□□ -1.76
CDH3-209ENST00000569080 GHRHP01286 108 aa4.05□□□□□ -1.76
CDH3-209ENST00000569080 TRBV7-4A0A0J9YYF1 115 aa4.04□□□□□ -1.76
CDH3-209ENST00000569080 ATP11AUNQ6ZP68 121 aa4.04□□□□□ -1.76
CDH3-209ENST00000569080 ORMDL1Q9P0S3 153 aa4.04□□□□□ -1.76
CDH3-209ENST00000569080 UQCR10Q9UDW1 63 aa4.04□□□□□ -1.76
CDH3-209ENST00000569080 TMA7Q9Y2S6 64 aaKnown RBP4.04□□□□□ -1.76
CDH3-209ENST00000569080 A0A1B0GV72 72 aa4.03□□□□□ -1.76
CDH3-209ENST00000569080 KRTAP16-1A8MUX0 517 aa4.03□□□□□ -1.76
CDH3-209ENST00000569080 DNAL4O96015 105 aa4.03□□□□□ -1.76
CDH3-209ENST00000569080 DSCR10P59022 87 aa4.03□□□□□ -1.76
CDH3-209ENST00000569080 COX6B2Q6YFQ2 88 aa4.03□□□□□ -1.76
CDH3-209ENST00000569080 H3BQ85 93 aa4.02□□□□□ -1.77
CDH3-209ENST00000569080 PSMB2P49721 201 aa4.02□□□□□ -1.77
CDH3-209ENST00000569080 SIGMAR1Q99720 223 aa4.02□□□□□ -1.77
CDH3-209ENST00000569080 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
CDH3-209ENST00000569080 TMEM256-PLSCR3K7ERE1 68 aa4.01□□□□□ -1.77
CDH3-209ENST00000569080 TRACP01848 142 aa4.01□□□□□ -1.77
CDH3-209ENST00000569080 UBE2V1Q13404 147 aa4.01□□□□□ -1.77
CDH3-209ENST00000569080 ANKRD29Q8N6D5 301 aa4.01□□□□□ -1.77
CDH3-209ENST00000569080 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
CDH3-209ENST00000569080 M0R2T5 61 aa4□□□□□ -1.77
CDH3-209ENST00000569080 CCKP06307 115 aa4□□□□□ -1.77
CDH3-209ENST00000569080 COX6CP09669 75 aa4□□□□□ -1.77
CDH3-209ENST00000569080 NOTCH2NLQ7Z3S9 236 aa4□□□□□ -1.77
CDH3-209ENST00000569080 IGKV4-1P06312 121 aa3.99□□□□□ -1.77
CDH3-209ENST00000569080 USH2AO75445 5202 aa3.97□□□□□ -1.77
CDH3-209ENST00000569080 LINC00313P59037 77 aa3.97□□□□□ -1.77
CDH3-209ENST00000569080 DEFB116Q30KQ4 102 aa3.97□□□□□ -1.77
CDH3-209ENST00000569080 MPLKIPQ8TAP9 179 aa3.96□□□□□ -1.78
CDH3-209ENST00000569080 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
CDH3-209ENST00000569080 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
CDH3-209ENST00000569080 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
CDH3-209ENST00000569080 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
CDH3-209ENST00000569080 A0A1B0GVX0 72 aa3.94□□□□□ -1.78
CDH3-209ENST00000569080 SCGB1C2P0DMR2 95 aa3.94□□□□□ -1.78
CDH3-209ENST00000569080 HRES1P13985 223 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms