RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
VPS9D1-207ENST00000568691 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
VPS9D1-207ENST00000568691 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.22□□□□□ -1.25
VPS9D1-207ENST00000568691 RPL37AP8A6NKH3 93 aa7.21□□□□□ -1.26
VPS9D1-207ENST00000568691 ETDBQ3ZM63 59 aa7.21□□□□□ -1.26
VPS9D1-207ENST00000568691 B5MCH6 92 aa7.2□□□□□ -1.26
VPS9D1-207ENST00000568691 H0Y9J4 135 aa7.2□□□□□ -1.26
VPS9D1-207ENST00000568691 TMEM256-PLSCR3K7ERE1 68 aa7.2□□□□□ -1.26
VPS9D1-207ENST00000568691 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
VPS9D1-207ENST00000568691 UBE2BP63146 152 aa7.2□□□□□ -1.26
VPS9D1-207ENST00000568691 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
VPS9D1-207ENST00000568691 J3QR89 54 aa7.19□□□□□ -1.26
VPS9D1-207ENST00000568691 K7ERU9 68 aa7.19□□□□□ -1.26
VPS9D1-207ENST00000568691 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
VPS9D1-207ENST00000568691 Q6ZQY7 126 aa7.17□□□□□ -1.26
VPS9D1-207ENST00000568691 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
VPS9D1-207ENST00000568691 BCE1O60756 84 aa7.15□□□□□ -1.26
VPS9D1-207ENST00000568691 OBSCN-AS1Q96MR7 158 aa7.15□□□□□ -1.26
VPS9D1-207ENST00000568691 Q9BRP9 147 aa7.15□□□□□ -1.26
VPS9D1-207ENST00000568691 JMJD7-PLA2G4BH0Y9G9 81 aa7.14□□□□□ -1.27
VPS9D1-207ENST00000568691 PRR4Q16378 134 aa7.14□□□□□ -1.27
VPS9D1-207ENST00000568691 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
VPS9D1-207ENST00000568691 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
VPS9D1-207ENST00000568691 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
VPS9D1-207ENST00000568691 IGLV5-48A0A075B6I7 105 aa7.12□□□□□ -1.27
VPS9D1-207ENST00000568691 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
VPS9D1-207ENST00000568691 PSORS1C2Q9UIG4 136 aa7.12□□□□□ -1.27
VPS9D1-207ENST00000568691 FAM240AA0A1B0GVK7 77 aa7.11□□□□□ -1.27
VPS9D1-207ENST00000568691 SMCR5Q8TEV8 140 aa7.11□□□□□ -1.27
VPS9D1-207ENST00000568691 UBE2AP49459 152 aa7.1□□□□□ -1.27
VPS9D1-207ENST00000568691 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
VPS9D1-207ENST00000568691 PRLHP81277 87 aa7.09□□□□□ -1.27
VPS9D1-207ENST00000568691 PDE6GP18545 87 aa7.08□□□□□ -1.28
VPS9D1-207ENST00000568691 LINC01547P58512 204 aaPredicted RBP7.08□□□□□ -1.28
VPS9D1-207ENST00000568691 LAMTOR3Q9UHA4 124 aa7.07□□□□□ -1.28
VPS9D1-207ENST00000568691 LOC110117498A0A087WWA1 95 aa7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 ACYP1P07311 99 aa7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 KRTAP1-4P0C5Y4 121 aa7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 SPRR1BP22528 89 aa7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 NDUFV3P56181 108 aaKnown RBP7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 RBM3P98179 157 aaKnown RBP7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 Q8N377 158 aa7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 HIGD2AQ9BW72 106 aa7.06□□□□□ -1.28
VPS9D1-207ENST00000568691 ERC2-IT1O76042 136 aa7.05□□□□□ -1.28
VPS9D1-207ENST00000568691 ZNF706Q9Y5V0 76 aaPredicted RBP7.05□□□□□ -1.28
VPS9D1-207ENST00000568691 DSCR8Q96T75 97 aa7.04□□□□□ -1.28
VPS9D1-207ENST00000568691 C14orf132Q9NPU4 83 aa7.04□□□□□ -1.28
VPS9D1-207ENST00000568691 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
VPS9D1-207ENST00000568691 ZNF861PO60384 105 aa7.03□□□□□ -1.28
VPS9D1-207ENST00000568691 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
VPS9D1-207ENST00000568691 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
VPS9D1-207ENST00000568691 F8WEM9 126 aa7.01□□□□□ -1.29
VPS9D1-207ENST00000568691 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
VPS9D1-207ENST00000568691 CCKP06307 115 aa7.01□□□□□ -1.29
VPS9D1-207ENST00000568691 Q6ZQT0 140 aa7.01□□□□□ -1.29
VPS9D1-207ENST00000568691 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
VPS9D1-207ENST00000568691 LINC00483Q53H64 154 aa7□□□□□ -1.29
VPS9D1-207ENST00000568691 DEFB105AQ8NG35 78 aa7□□□□□ -1.29
VPS9D1-207ENST00000568691 A0A1B0GW54 56 aa6.99□□□□□ -1.29
VPS9D1-207ENST00000568691 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
VPS9D1-207ENST00000568691 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
VPS9D1-207ENST00000568691 SMIM29Q86T20 159 aa6.98□□□□□ -1.29
VPS9D1-207ENST00000568691 VPS25Q9BRG1 176 aa6.97□□□□□ -1.29
VPS9D1-207ENST00000568691 A0A1B0GV72 72 aa6.96□□□□□ -1.3
VPS9D1-207ENST00000568691 Q6JHZ5 121 aa6.96□□□□□ -1.3
VPS9D1-207ENST00000568691 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
VPS9D1-207ENST00000568691 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
VPS9D1-207ENST00000568691 C3orf22Q8N5N4 141 aa6.95□□□□□ -1.3
VPS9D1-207ENST00000568691 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
VPS9D1-207ENST00000568691 Q8NBF4 154 aa6.92□□□□□ -1.3
VPS9D1-207ENST00000568691 ATP5EP2Q5VTU8 51 aa6.91□□□□□ -1.3
VPS9D1-207ENST00000568691 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
VPS9D1-207ENST00000568691 FAM229BQ4G0N7 80 aa6.9□□□□□ -1.3
VPS9D1-207ENST00000568691 Q6Q795 121 aa6.9□□□□□ -1.3
VPS9D1-207ENST00000568691 UBL5Q9BZL1 73 aa6.9□□□□□ -1.3
VPS9D1-207ENST00000568691 LINC00846Q9NV44 126 aa6.9□□□□□ -1.3
VPS9D1-207ENST00000568691 IGFL1Q6UW32 110 aa6.89□□□□□ -1.31
VPS9D1-207ENST00000568691 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
VPS9D1-207ENST00000568691 CRYGAP11844 174 aa6.88□□□□□ -1.31
VPS9D1-207ENST00000568691 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
VPS9D1-207ENST00000568691 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
VPS9D1-207ENST00000568691 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
VPS9D1-207ENST00000568691 SIGMAR1Q99720 223 aa6.87□□□□□ -1.31
VPS9D1-207ENST00000568691 TRBV7-7A0A0K0K1E9 115 aa6.86□□□□□ -1.31
VPS9D1-207ENST00000568691 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
VPS9D1-207ENST00000568691 C9orf153Q5TBE3 101 aa6.86□□□□□ -1.31
VPS9D1-207ENST00000568691 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
VPS9D1-207ENST00000568691 A0A087X002 238 aa6.84□□□□□ -1.31
VPS9D1-207ENST00000568691 Q6ZVQ6 151 aa6.84□□□□□ -1.31
VPS9D1-207ENST00000568691 IGLV9-49A0A0B4J1Y8 123 aa6.83□□□□□ -1.32
VPS9D1-207ENST00000568691 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
VPS9D1-207ENST00000568691 MOBPQ13875 183 aa6.83□□□□□ -1.32
VPS9D1-207ENST00000568691 CXCL6P80162 114 aa6.82□□□□□ -1.32
VPS9D1-207ENST00000568691 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
VPS9D1-207ENST00000568691 CD164Q04900 197 aa6.81□□□□□ -1.32
VPS9D1-207ENST00000568691 SCGB1A1P11684 91 aa6.8□□□□□ -1.32
VPS9D1-207ENST00000568691 NREPQ16612 68 aa6.8□□□□□ -1.32
VPS9D1-207ENST00000568691 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
VPS9D1-207ENST00000568691 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
VPS9D1-207ENST00000568691 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms