RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 H3BNG1 76 aa5.72□□□□□ -1.49
HDGFL3-206ENST00000568294 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
HDGFL3-206ENST00000568294 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
HDGFL3-206ENST00000568294 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
HDGFL3-206ENST00000568294 DSCR10P59022 87 aa5.7□□□□□ -1.5
HDGFL3-206ENST00000568294 PSPHP1O15172 72 aa5.7□□□□□ -1.5
HDGFL3-206ENST00000568294 IGFL1Q6UW32 110 aa5.69□□□□□ -1.5
HDGFL3-206ENST00000568294 IGLV5-48A0A075B6I7 105 aa5.69□□□□□ -1.5
HDGFL3-206ENST00000568294 H0Y9J4 135 aa5.69□□□□□ -1.5
HDGFL3-206ENST00000568294 NDUFC1O43677 76 aa5.68□□□□□ -1.5
HDGFL3-206ENST00000568294 IGLV9-49A0A0B4J1Y8 123 aa5.67□□□□□ -1.5
HDGFL3-206ENST00000568294 K7EIL1 84 aa5.67□□□□□ -1.5
HDGFL3-206ENST00000568294 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
HDGFL3-206ENST00000568294 KRTAP11-1Q8IUC1 163 aa5.67□□□□□ -1.5
HDGFL3-206ENST00000568294 HCG22E2RYF7 251 aa5.67□□□□□ -1.5
HDGFL3-206ENST00000568294 KRTAP4-16G5E9R7 235 aaPredicted RBP5.66□□□□□ -1.5
HDGFL3-206ENST00000568294 BCE1O60756 84 aa5.66□□□□□ -1.5
HDGFL3-206ENST00000568294 TNP2Q05952 138 aa5.66□□□□□ -1.5
HDGFL3-206ENST00000568294 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
HDGFL3-206ENST00000568294 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
HDGFL3-206ENST00000568294 SPRR1AP35321 89 aa5.63□□□□□ -1.51
HDGFL3-206ENST00000568294 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
HDGFL3-206ENST00000568294 NDUFS5O43920 106 aa5.63□□□□□ -1.51
HDGFL3-206ENST00000568294 MP68P56378 58 aa5.62□□□□□ -1.51
HDGFL3-206ENST00000568294 PCOTHQ58A44 107 aa5.62□□□□□ -1.51
HDGFL3-206ENST00000568294 PANO1I0J062 215 aa5.61□□□□□ -1.51
HDGFL3-206ENST00000568294 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
HDGFL3-206ENST00000568294 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
HDGFL3-206ENST00000568294 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
HDGFL3-206ENST00000568294 C16orf90A8MZG2 172 aa5.6□□□□□ -1.51
HDGFL3-206ENST00000568294 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
HDGFL3-206ENST00000568294 H0Y9P7 68 aa5.59□□□□□ -1.51
HDGFL3-206ENST00000568294 MDFIQ99750 246 aa5.59□□□□□ -1.51
HDGFL3-206ENST00000568294 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.51
HDGFL3-206ENST00000568294 IGLV5-37A0A075B6J1 123 aa5.58□□□□□ -1.52
HDGFL3-206ENST00000568294 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
HDGFL3-206ENST00000568294 B9D2Q9BPU9 175 aa5.57□□□□□ -1.52
HDGFL3-206ENST00000568294 CMYA5Q8N3K9 4069 aa5.57□□□□□ -1.52
HDGFL3-206ENST00000568294 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
HDGFL3-206ENST00000568294 DNAH9Q9NYC9 4486 aa5.56□□□□□ -1.52
HDGFL3-206ENST00000568294 A8MUN3 132 aa5.56□□□□□ -1.52
HDGFL3-206ENST00000568294 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
HDGFL3-206ENST00000568294 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
HDGFL3-206ENST00000568294 A8MU10 97 aa5.55□□□□□ -1.52
HDGFL3-206ENST00000568294 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
HDGFL3-206ENST00000568294 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
HDGFL3-206ENST00000568294 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
HDGFL3-206ENST00000568294 TRAV22A0A0B4J277 110 aa5.52□□□□□ -1.53
HDGFL3-206ENST00000568294 MOBPQ13875 183 aa5.52□□□□□ -1.53
HDGFL3-206ENST00000568294 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
HDGFL3-206ENST00000568294 TGP01266 2768 aa5.52□□□□□ -1.53
HDGFL3-206ENST00000568294 C1orf195Q5TG92 126 aa5.52□□□□□ -1.53
HDGFL3-206ENST00000568294 DNAH7Q8WXX0 4024 aa5.52□□□□□ -1.53
HDGFL3-206ENST00000568294 NDUFB1O75438 58 aa5.51□□□□□ -1.53
HDGFL3-206ENST00000568294 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
HDGFL3-206ENST00000568294 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
HDGFL3-206ENST00000568294 A8MWP4 228 aa5.5□□□□□ -1.53
HDGFL3-206ENST00000568294 CDK2AP2O75956 126 aa5.5□□□□□ -1.53
HDGFL3-206ENST00000568294 ZCCHC13Q8WW36 166 aaKnown RBP5.5□□□□□ -1.53
HDGFL3-206ENST00000568294 APLNQ9ULZ1 77 aa5.5□□□□□ -1.53
HDGFL3-206ENST00000568294 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
HDGFL3-206ENST00000568294 NBDYA0A0U1RRE5 68 aa5.49□□□□□ -1.53
HDGFL3-206ENST00000568294 C14orf177Q52M58 125 aa5.49□□□□□ -1.53
HDGFL3-206ENST00000568294 PLECQ15149 4684 aaKnown RBP5.49□□□□□ -1.53
HDGFL3-206ENST00000568294 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
HDGFL3-206ENST00000568294 A0A1B0GW54 56 aa5.48□□□□□ -1.53
HDGFL3-206ENST00000568294 DNAH1Q9P2D7 4330 aa5.47□□□□□ -1.53
HDGFL3-206ENST00000568294 FAM229AH3BQW9 127 aa5.47□□□□□ -1.53
HDGFL3-206ENST00000568294 CIRBP-AS1Q8TBR5 109 aa5.47□□□□□ -1.53
HDGFL3-206ENST00000568294 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
HDGFL3-206ENST00000568294 SPAG11AQ6PDA7 123 aa5.46□□□□□ -1.54
HDGFL3-206ENST00000568294 KRTAP29-1A8MX34 341 aaPredicted RBP5.46□□□□□ -1.54
HDGFL3-206ENST00000568294 A0A087X002 238 aa5.45□□□□□ -1.54
HDGFL3-206ENST00000568294 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
HDGFL3-206ENST00000568294 NOTCH2NLQ7Z3S9 236 aa5.45□□□□□ -1.54
HDGFL3-206ENST00000568294 LCE6AA0A183 80 aa5.45□□□□□ -1.54
HDGFL3-206ENST00000568294 PSORS1C2Q9UIG4 136 aa5.44□□□□□ -1.54
HDGFL3-206ENST00000568294 A6NED7 52 aa5.44□□□□□ -1.54
HDGFL3-206ENST00000568294 COA5Q86WW8 74 aa5.44□□□□□ -1.54
HDGFL3-206ENST00000568294 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
HDGFL3-206ENST00000568294 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
HDGFL3-206ENST00000568294 IGLV8-61A0A075B6I0 122 aa5.42□□□□□ -1.54
HDGFL3-206ENST00000568294 RTL8CO15255 209 aa5.42□□□□□ -1.54
HDGFL3-206ENST00000568294 DNAH3Q8TD57 4116 aa5.42□□□□□ -1.54
HDGFL3-206ENST00000568294 FBN3Q75N90 2809 aa5.42□□□□□ -1.54
HDGFL3-206ENST00000568294 CD164Q04900 197 aa5.41□□□□□ -1.54
HDGFL3-206ENST00000568294 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
HDGFL3-206ENST00000568294 LY6G6CO95867 125 aa5.41□□□□□ -1.54
HDGFL3-206ENST00000568294 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
HDGFL3-206ENST00000568294 Q1T7F1 81 aa5.41□□□□□ -1.54
HDGFL3-206ENST00000568294 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.54
HDGFL3-206ENST00000568294 A0A087WTM6 91 aa5.4□□□□□ -1.55
HDGFL3-206ENST00000568294 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
HDGFL3-206ENST00000568294 Q5VV11 94 aa5.39□□□□□ -1.55
HDGFL3-206ENST00000568294 STARD9Q9P2P6 4700 aa5.39□□□□□ -1.55
HDGFL3-206ENST00000568294 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
HDGFL3-206ENST00000568294 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
HDGFL3-206ENST00000568294 NUPR2A6NF83 97 aa5.38□□□□□ -1.55
HDGFL3-206ENST00000568294 SPRR1BP22528 89 aa5.38□□□□□ -1.55
HDGFL3-206ENST00000568294 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms