RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
ATXN3-250ENST00000568290 Q8N9L7 120 aa4.85□□□□□ -1.63
ATXN3-250ENST00000568290 HIGD2AQ9BW72 106 aa4.85□□□□□ -1.63
ATXN3-250ENST00000568290 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
ATXN3-250ENST00000568290 FAM30AQ9NZY2 134 aa4.85□□□□□ -1.63
ATXN3-250ENST00000568290 FAM168BA1KXE4 195 aa4.84□□□□□ -1.63
ATXN3-250ENST00000568290 DSCR10P59022 87 aa4.84□□□□□ -1.63
ATXN3-250ENST00000568290 HRCT1Q6UXD1 115 aa4.84□□□□□ -1.63
ATXN3-250ENST00000568290 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
ATXN3-250ENST00000568290 ST20-AS1Q8NBB2 130 aa4.84□□□□□ -1.63
ATXN3-250ENST00000568290 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
ATXN3-250ENST00000568290 ATRQ13535 2644 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 A0A087WSZ3 146 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 A0A096LNI7 61 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 IGKV2-24A0A0C4DH68 120 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 A8MWP4 228 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 K7EIL1 84 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 K7EQZ3 153 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 C4orf26Q17RF5 130 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 C9orf163Q8N9P6 203 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
ATXN3-250ENST00000568290 CDK2AP2O75956 126 aa4.82□□□□□ -1.64
ATXN3-250ENST00000568290 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
ATXN3-250ENST00000568290 OXTP01178 125 aa4.81□□□□□ -1.64
ATXN3-250ENST00000568290 PRR15Q8IV56 129 aa4.81□□□□□ -1.64
ATXN3-250ENST00000568290 APLNQ9ULZ1 77 aa4.81□□□□□ -1.64
ATXN3-250ENST00000568290 ZNF469Q96JG9 3925 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-250ENST00000568290 NBDYA0A0U1RRE5 68 aa4.8□□□□□ -1.64
ATXN3-250ENST00000568290 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
ATXN3-250ENST00000568290 PRLHP81277 87 aa4.8□□□□□ -1.64
ATXN3-250ENST00000568290 MOBPQ13875 183 aa4.8□□□□□ -1.64
ATXN3-250ENST00000568290 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
ATXN3-250ENST00000568290 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
ATXN3-250ENST00000568290 OTOGQ6ZRI0 2925 aa4.79□□□□□ -1.64
ATXN3-250ENST00000568290 Q1T7F1 81 aa4.79□□□□□ -1.64
ATXN3-250ENST00000568290 CASC10Q5T4H9 136 aa4.79□□□□□ -1.64
ATXN3-250ENST00000568290 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
ATXN3-250ENST00000568290 NBPF19A0A087WUL8 3843 aa4.79□□□□□ -1.64
ATXN3-250ENST00000568290 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
ATXN3-250ENST00000568290 A0A1W2PNN7 141 aa4.78□□□□□ -1.64
ATXN3-250ENST00000568290 VWFP04275 2813 aa4.78□□□□□ -1.65
ATXN3-250ENST00000568290 H0Y9P7 68 aa4.77□□□□□ -1.65
ATXN3-250ENST00000568290 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-250ENST00000568290 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
ATXN3-250ENST00000568290 HECTD1Q9ULT8 2610 aa4.77□□□□□ -1.65
ATXN3-250ENST00000568290 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
ATXN3-250ENST00000568290 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
ATXN3-250ENST00000568290 LINC00208Q96KT6 92 aa4.76□□□□□ -1.65
ATXN3-250ENST00000568290 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
ATXN3-250ENST00000568290 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
ATXN3-250ENST00000568290 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
ATXN3-250ENST00000568290 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-250ENST00000568290 LINC00483Q53H64 154 aa4.74□□□□□ -1.65
ATXN3-250ENST00000568290 C1orf64Q8NEQ6 169 aa4.74□□□□□ -1.65
ATXN3-250ENST00000568290 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
ATXN3-250ENST00000568290 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
ATXN3-250ENST00000568290 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
ATXN3-250ENST00000568290 LRCOL1A6NCL2 159 aa4.73□□□□□ -1.65
ATXN3-250ENST00000568290 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
ATXN3-250ENST00000568290 LINC00336Q6ZUF6 198 aa4.72□□□□□ -1.65
ATXN3-250ENST00000568290 SPACA4Q8TDM5 124 aa4.72□□□□□ -1.65
ATXN3-250ENST00000568290 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
ATXN3-250ENST00000568290 CD164Q04900 197 aa4.71□□□□□ -1.66
ATXN3-250ENST00000568290 KRTAP13-1Q8IUC0 172 aa4.71□□□□□ -1.66
ATXN3-250ENST00000568290 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
ATXN3-250ENST00000568290 IGLV7-46A0A075B6I9 117 aa4.7□□□□□ -1.66
ATXN3-250ENST00000568290 PRB2P02812 416 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-250ENST00000568290 F8P00451 2351 aa4.69□□□□□ -1.66
ATXN3-250ENST00000568290 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
ATXN3-250ENST00000568290 C8orf87E5RJ46 101 aa4.69□□□□□ -1.66
ATXN3-250ENST00000568290 ZNF861PO60384 105 aa4.69□□□□□ -1.66
ATXN3-250ENST00000568290 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
ATXN3-250ENST00000568290 CUBNO60494 3623 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 A0A087WTM6 91 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 MMP24-AS1A0A0U1RRL7 71 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 LOC101927531A0A1B0GV80 90 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 DEFB116Q30KQ4 102 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
ATXN3-250ENST00000568290 IGLV5-52A0A0A0MRZ9 124 aa4.67□□□□□ -1.66
ATXN3-250ENST00000568290 Q6ZR54 194 aa4.67□□□□□ -1.66
ATXN3-250ENST00000568290 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-250ENST00000568290 Q8N1X5 172 aa4.67□□□□□ -1.66
ATXN3-250ENST00000568290 MRPL34Q9BQ48 92 aaKnown RBP4.67□□□□□ -1.66
ATXN3-250ENST00000568290 RTL8CO15255 209 aa4.66□□□□□ -1.66
ATXN3-250ENST00000568290 NDUFS5O43920 106 aa4.66□□□□□ -1.66
ATXN3-250ENST00000568290 ASB16-AS1Q495Z4 193 aa4.66□□□□□ -1.66
ATXN3-250ENST00000568290 FAM229BQ4G0N7 80 aa4.65□□□□□ -1.67
ATXN3-250ENST00000568290 C1orf134Q5TEV5 83 aa4.65□□□□□ -1.67
ATXN3-250ENST00000568290 MAST4O15021 2626 aa4.64□□□□□ -1.67
ATXN3-250ENST00000568290 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
ATXN3-250ENST00000568290 COA5Q86WW8 74 aa4.62□□□□□ -1.67
ATXN3-250ENST00000568290 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
ATXN3-250ENST00000568290 A0A0G2JQZ4 141 aa4.61□□□□□ -1.67
ATXN3-250ENST00000568290 IGLV7-43P04211 117 aa4.61□□□□□ -1.67
ATXN3-250ENST00000568290 PRR4Q16378 134 aa4.61□□□□□ -1.67
ATXN3-250ENST00000568290 FLNBO75369 2602 aaKnown RBP4.6□□□□□ -1.67
ATXN3-250ENST00000568290 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms