RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
COMMD4-221ENST00000567935 XGP55808 180 aa9.1□□□□□ -0.95
COMMD4-221ENST00000567935 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
COMMD4-221ENST00000567935 Q6ZQT0 140 aa9.1□□□□□ -0.95
COMMD4-221ENST00000567935 LINC00643Q86TS7 51 aa9.1□□□□□ -0.95
COMMD4-221ENST00000567935 Q8N377 158 aa9.1□□□□□ -0.95
COMMD4-221ENST00000567935 TRBV7-4A0A0J9YYF1 115 aa9.09□□□□□ -0.95
COMMD4-221ENST00000567935 LINC01547P58512 204 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-221ENST00000567935 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
COMMD4-221ENST00000567935 UBE2AP49459 152 aa9.07□□□□□ -0.96
COMMD4-221ENST00000567935 A0A1B0GV72 72 aa9.06□□□□□ -0.96
COMMD4-221ENST00000567935 PRLHP81277 87 aa9.06□□□□□ -0.96
COMMD4-221ENST00000567935 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
COMMD4-221ENST00000567935 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
COMMD4-221ENST00000567935 MT-ATP8P03928 68 aa9.05□□□□□ -0.96
COMMD4-221ENST00000567935 FUSP35637 526 aaKnown RBP eCLIP9.05□□□□□ -0.96
COMMD4-221ENST00000567935 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
COMMD4-221ENST00000567935 A0A1B0GW54 56 aa9.04□□□□□ -0.96
COMMD4-221ENST00000567935 Q6Q795 121 aa9.04□□□□□ -0.96
COMMD4-221ENST00000567935 KRTAP11-1Q8IUC1 163 aa9.04□□□□□ -0.96
COMMD4-221ENST00000567935 ST20-AS1Q8NBB2 130 aa9.04□□□□□ -0.96
COMMD4-221ENST00000567935 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
COMMD4-221ENST00000567935 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
COMMD4-221ENST00000567935 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
COMMD4-221ENST00000567935 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
COMMD4-221ENST00000567935 F8WEM9 126 aa9.02□□□□□ -0.97
COMMD4-221ENST00000567935 SPRR1BP22528 89 aa9.02□□□□□ -0.97
COMMD4-221ENST00000567935 UBL5Q9BZL1 73 aa9.02□□□□□ -0.97
COMMD4-221ENST00000567935 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
COMMD4-221ENST00000567935 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
COMMD4-221ENST00000567935 Q6JHZ5 121 aa9□□□□□ -0.97
COMMD4-221ENST00000567935 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
COMMD4-221ENST00000567935 Q6ZSA8 131 aa8.99□□□□□ -0.97
COMMD4-221ENST00000567935 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
COMMD4-221ENST00000567935 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
COMMD4-221ENST00000567935 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
COMMD4-221ENST00000567935 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
COMMD4-221ENST00000567935 KRTAP29-1A8MX34 341 aaPredicted RBP8.96□□□□□ -0.98
COMMD4-221ENST00000567935 C1orf137Q5JT78 98 aa8.96□□□□□ -0.98
COMMD4-221ENST00000567935 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
COMMD4-221ENST00000567935 C3orf22Q8N5N4 141 aa8.94□□□□□ -0.98
COMMD4-221ENST00000567935 ZNF861PO60384 105 aa8.93□□□□□ -0.98
COMMD4-221ENST00000567935 Q8NBF4 154 aa8.93□□□□□ -0.98
COMMD4-221ENST00000567935 FAT3Q8TDW7 4589 aa8.92□□□□□ -0.98
COMMD4-221ENST00000567935 PCP4P48539 62 aa8.92□□□□□ -0.98
COMMD4-221ENST00000567935 Q6ZVQ6 151 aa8.92□□□□□ -0.98
COMMD4-221ENST00000567935 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
COMMD4-221ENST00000567935 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
COMMD4-221ENST00000567935 SPRR4Q96PI1 79 aa8.91□□□□□ -0.98
COMMD4-221ENST00000567935 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
COMMD4-221ENST00000567935 HAMPP81172 84 aa8.9□□□□□ -0.98
COMMD4-221ENST00000567935 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
COMMD4-221ENST00000567935 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
COMMD4-221ENST00000567935 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.98
COMMD4-221ENST00000567935 DNAH8Q96JB1 4490 aa8.9□□□□□ -0.99
COMMD4-221ENST00000567935 IGLV7-43P04211 117 aa8.89□□□□□ -0.99
COMMD4-221ENST00000567935 RPL37AP61513 92 aaKnown RBP8.89□□□□□ -0.99
COMMD4-221ENST00000567935 CXCL6P80162 114 aa8.89□□□□□ -0.99
COMMD4-221ENST00000567935 A0A1W2PNM2 257 aa8.88□□□□□ -0.99
COMMD4-221ENST00000567935 CRYGAP11844 174 aa8.87□□□□□ -0.99
COMMD4-221ENST00000567935 IGKV3D-7A0A0C4DH55 119 aa8.86□□□□□ -0.99
COMMD4-221ENST00000567935 NREPQ16612 68 aa8.86□□□□□ -0.99
COMMD4-221ENST00000567935 IGFL1Q6UW32 110 aa8.86□□□□□ -0.99
COMMD4-221ENST00000567935 PKHD1L1Q86WI1 4243 aa8.85□□□□□ -0.99
COMMD4-221ENST00000567935 LRP2P98164 4655 aa8.85□□□□□ -0.99
COMMD4-221ENST00000567935 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
COMMD4-221ENST00000567935 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
COMMD4-221ENST00000567935 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
COMMD4-221ENST00000567935 BPY2O14599 106 aa8.78□□□□□ -1
COMMD4-221ENST00000567935 C9orf153Q5TBE3 101 aa8.77□□□□□ -1.01
COMMD4-221ENST00000567935 ANAPC13Q9BS18 74 aa8.77□□□□□ -1.01
COMMD4-221ENST00000567935 KRTAP9-2Q9BYQ4 174 aa8.77□□□□□ -1.01
COMMD4-221ENST00000567935 ATOX1O00244 68 aa8.75□□□□□ -1.01
COMMD4-221ENST00000567935 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
COMMD4-221ENST00000567935 A0A087WSZ3 146 aa8.73□□□□□ -1.01
COMMD4-221ENST00000567935 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
COMMD4-221ENST00000567935 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
COMMD4-221ENST00000567935 TNXBP22105 4242 aa8.72□□□□□ -1.01
COMMD4-221ENST00000567935 A0A087WVE0 104 aa8.71□□□□□ -1.02
COMMD4-221ENST00000567935 KRTAP9-6A0A140TA67 174 aa8.71□□□□□ -1.02
COMMD4-221ENST00000567935 OXTP01178 125 aa8.71□□□□□ -1.02
COMMD4-221ENST00000567935 MOBPQ13875 183 aa8.71□□□□□ -1.02
COMMD4-221ENST00000567935 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
COMMD4-221ENST00000567935 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
COMMD4-221ENST00000567935 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
COMMD4-221ENST00000567935 CD164Q04900 197 aa8.69□□□□□ -1.02
COMMD4-221ENST00000567935 J3KT08 172 aa8.67□□□□□ -1.02
COMMD4-221ENST00000567935 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
COMMD4-221ENST00000567935 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
COMMD4-221ENST00000567935 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
COMMD4-221ENST00000567935 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
COMMD4-221ENST00000567935 DSCR10P59022 87 aa8.64□□□□□ -1.03
COMMD4-221ENST00000567935 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
COMMD4-221ENST00000567935 LINC00472Q9H8W2 130 aa8.63□□□□□ -1.03
COMMD4-221ENST00000567935 SERP2Q8N6R1 65 aa8.62□□□□□ -1.03
COMMD4-221ENST00000567935 UQCRQO14949 82 aa8.6□□□□□ -1.03
COMMD4-221ENST00000567935 COX7CP15954 63 aa8.6□□□□□ -1.03
COMMD4-221ENST00000567935 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
COMMD4-221ENST00000567935 Q8N9L7 120 aa8.59□□□□□ -1.03
COMMD4-221ENST00000567935 A8MWP4 228 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms