RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 ZNF73O43830 326 aaPredicted RBP3.45□□□□□ -1.86
CAPN3-217ENST00000567817 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 COX7CP15954 63 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 COX7BP24311 80 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 ELOF1P60002 83 aaKnown RBP3.45□□□□□ -1.86
CAPN3-217ENST00000567817 SMIM20Q8N5G0 67 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
CAPN3-217ENST00000567817 DEFB131BA0A096LNP1 70 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 DNAH10OSP0CZ25 163 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 CRYGAP11844 174 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 CXCL6P80162 114 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
CAPN3-217ENST00000567817 C9orf153Q5TBE3 101 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 C11orf45Q8TAV5 145 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 LAMTOR3Q9UHA4 124 aa3.44□□□□□ -1.86
CAPN3-217ENST00000567817 TRAV10A0A0B4J240 114 aa3.43□□□□□ -1.86
CAPN3-217ENST00000567817 PRR3P79522 188 aaKnown RBP3.43□□□□□ -1.86
CAPN3-217ENST00000567817 KRTAP26-1Q6PEX3 210 aa3.43□□□□□ -1.86
CAPN3-217ENST00000567817 Q6ZQT0 140 aa3.43□□□□□ -1.86
CAPN3-217ENST00000567817 Q6ZQY7 126 aa3.43□□□□□ -1.86
CAPN3-217ENST00000567817 WFDC10BQ8IUB3 73 aa3.43□□□□□ -1.86
CAPN3-217ENST00000567817 SYCNQ0VAF6 134 aa3.42□□□□□ -1.86
CAPN3-217ENST00000567817 ESRGQ1W209 222 aa3.42□□□□□ -1.86
CAPN3-217ENST00000567817 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
CAPN3-217ENST00000567817 C15orf56Q8N910 161 aa3.42□□□□□ -1.86
CAPN3-217ENST00000567817 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
CAPN3-217ENST00000567817 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
CAPN3-217ENST00000567817 DNAH6Q9C0G6 4158 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 IGKV2D-24A0A075B6R9 120 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 TRBV7-4A0A0J9YYF1 115 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 TMEM258P61165 79 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 Q6ZRU5 148 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 NKAPP1Q8N9T2 125 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 Q8NDZ9 215 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 UPK3BQ9BT76 320 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 KCNQ1DNQ9H478 68 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 XAGE1AQ9HD64 81 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 SS18L2Q9UHA2 77 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 PKIGQ9Y2B9 76 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 HSPG2P98160 4391 aa3.41□□□□□ -1.86
CAPN3-217ENST00000567817 HIGD2BQ4VC39 106 aa3.4□□□□□ -1.87
CAPN3-217ENST00000567817 RETNQ9HD89 108 aa3.4□□□□□ -1.87
CAPN3-217ENST00000567817 LOC107984640A0A0U1RRK4 108 aa3.39□□□□□ -1.87
CAPN3-217ENST00000567817 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
CAPN3-217ENST00000567817 RPS28P62857 69 aaKnown RBP3.39□□□□□ -1.87
CAPN3-217ENST00000567817 Q6ZVQ6 151 aa3.39□□□□□ -1.87
CAPN3-217ENST00000567817 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
CAPN3-217ENST00000567817 J3KT08 172 aa3.38□□□□□ -1.87
CAPN3-217ENST00000567817 NDUFC1O43677 76 aa3.38□□□□□ -1.87
CAPN3-217ENST00000567817 DSCR10P59022 87 aa3.38□□□□□ -1.87
CAPN3-217ENST00000567817 Q6ZRP5 223 aa3.38□□□□□ -1.87
CAPN3-217ENST00000567817 IGLV5-48A0A075B6I7 105 aa3.37□□□□□ -1.87
CAPN3-217ENST00000567817 TRAV7A0A075B6U4 112 aa3.37□□□□□ -1.87
CAPN3-217ENST00000567817 A0A087WVE0 104 aa3.37□□□□□ -1.87
CAPN3-217ENST00000567817 SPRR1AP35321 89 aa3.37□□□□□ -1.87
CAPN3-217ENST00000567817 FUSP35637 526 aaKnown RBP eCLIP3.37□□□□□ -1.87
CAPN3-217ENST00000567817 HAMPP81172 84 aa3.37□□□□□ -1.87
CAPN3-217ENST00000567817 Q6ZRX8 168 aa3.37□□□□□ -1.87
CAPN3-217ENST00000567817 DNAH17Q9UFH2 4485 aa3.36□□□□□ -1.87
CAPN3-217ENST00000567817 ETDCA0A1B0GVM5 59 aa3.36□□□□□ -1.87
CAPN3-217ENST00000567817 RTL8CO15255 209 aa3.36□□□□□ -1.87
CAPN3-217ENST00000567817 C7orf33Q8WU49 177 aa3.36□□□□□ -1.87
CAPN3-217ENST00000567817 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
CAPN3-217ENST00000567817 PKD1P98161 4303 aa3.35□□□□□ -1.87
CAPN3-217ENST00000567817 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
CAPN3-217ENST00000567817 RPL37AP8A6NKH3 93 aa3.35□□□□□ -1.87
CAPN3-217ENST00000567817 C16orf90A8MZG2 172 aa3.35□□□□□ -1.87
CAPN3-217ENST00000567817 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
CAPN3-217ENST00000567817 ERC2-IT1O76042 136 aa3.35□□□□□ -1.87
CAPN3-217ENST00000567817 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
CAPN3-217ENST00000567817 KRTAP4-16G5E9R7 235 aaPredicted RBP3.34□□□□□ -1.87
CAPN3-217ENST00000567817 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
CAPN3-217ENST00000567817 KLKP1Q107X0 134 aa3.34□□□□□ -1.87
CAPN3-217ENST00000567817 NREPQ16612 68 aa3.34□□□□□ -1.87
CAPN3-217ENST00000567817 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.87
CAPN3-217ENST00000567817 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
CAPN3-217ENST00000567817 F8WEM9 126 aa3.33□□□□□ -1.88
CAPN3-217ENST00000567817 BPY2O14599 106 aa3.33□□□□□ -1.88
CAPN3-217ENST00000567817 APLNQ9ULZ1 77 aa3.33□□□□□ -1.88
CAPN3-217ENST00000567817 SRRM2Q9UQ35 2752 aaKnown RBP3.33□□□□□ -1.88
CAPN3-217ENST00000567817 REG3GQ6UW15 175 aa3.32□□□□□ -1.88
CAPN3-217ENST00000567817 Q8N377 158 aa3.32□□□□□ -1.88
CAPN3-217ENST00000567817 Q8NBF4 154 aa3.32□□□□□ -1.88
CAPN3-217ENST00000567817 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
CAPN3-217ENST00000567817 LINC00474Q9P2X8 69 aa3.32□□□□□ -1.88
CAPN3-217ENST00000567817 APOBP04114 4563 aaKnown RBP3.31□□□□□ -1.88
CAPN3-217ENST00000567817 LRP1BQ9NZR2 4599 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 H0Y9J4 135 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 M0R2N4 97 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 UBE2BP63146 152 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 C1orf137Q5JT78 98 aa3.31□□□□□ -1.88
CAPN3-217ENST00000567817 C1orf134Q5TEV5 83 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms