RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 NDUFC1O43677 76 aa8.29□□□□□ -1.08
LINC00563-201ENST00000566370 COL7A1Q02388 2944 aa8.29□□□□□ -1.08
LINC00563-201ENST00000566370 DYNC2H1Q8NCM8 4307 aaKnown RBP8.29□□□□□ -1.08
LINC00563-201ENST00000566370 LY6G6CO95867 125 aa8.29□□□□□ -1.08
LINC00563-201ENST00000566370 RPL37AP61513 92 aaKnown RBP8.29□□□□□ -1.08
LINC00563-201ENST00000566370 Q8N9L7 120 aa8.29□□□□□ -1.08
LINC00563-201ENST00000566370 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
LINC00563-201ENST00000566370 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
LINC00563-201ENST00000566370 A0A087WSZ3 146 aa8.27□□□□□ -1.09
LINC00563-201ENST00000566370 J3KT08 172 aa8.27□□□□□ -1.09
LINC00563-201ENST00000566370 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
LINC00563-201ENST00000566370 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
LINC00563-201ENST00000566370 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
LINC00563-201ENST00000566370 PLAC8Q9NZF1 115 aa8.27□□□□□ -1.09
LINC00563-201ENST00000566370 PANO1I0J062 215 aa8.26□□□□□ -1.09
LINC00563-201ENST00000566370 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
LINC00563-201ENST00000566370 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
LINC00563-201ENST00000566370 DSCR10P59022 87 aa8.22□□□□□ -1.09
LINC00563-201ENST00000566370 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
LINC00563-201ENST00000566370 ATP5EP56381 51 aaPredicted RBP8.21□□□□□ -1.09
LINC00563-201ENST00000566370 LINC00483Q53H64 154 aa8.21□□□□□ -1.09
LINC00563-201ENST00000566370 FAM236DA0A1B0GTK5 79 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 K7EQZ3 153 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 FAM236CP0DP71 79 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 TMEM254Q8TBM7 123 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 OCR1Q9BZK8 76 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 ZNF861PO60384 105 aa8.2□□□□□ -1.1
LINC00563-201ENST00000566370 NDUFB1O75438 58 aa8.19□□□□□ -1.1
LINC00563-201ENST00000566370 IGLV9-49A0A0B4J1Y8 123 aa8.17□□□□□ -1.1
LINC00563-201ENST00000566370 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
LINC00563-201ENST00000566370 SNURFQ9Y675 71 aa8.17□□□□□ -1.1
LINC00563-201ENST00000566370 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
LINC00563-201ENST00000566370 A8MWP4 228 aa8.15□□□□□ -1.1
LINC00563-201ENST00000566370 H7BZZ5 65 aa8.15□□□□□ -1.1
LINC00563-201ENST00000566370 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
LINC00563-201ENST00000566370 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
LINC00563-201ENST00000566370 A0A0U1RQV1 116 aa8.12□□□□□ -1.11
LINC00563-201ENST00000566370 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
LINC00563-201ENST00000566370 DEFB116Q30KQ4 102 aa8.12□□□□□ -1.11
LINC00563-201ENST00000566370 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
LINC00563-201ENST00000566370 LINC00472Q9H8W2 130 aa8.12□□□□□ -1.11
LINC00563-201ENST00000566370 CDK2AP2O75956 126 aa8.12□□□□□ -1.11
LINC00563-201ENST00000566370 TENM2Q9NT68 2774 aa8.11□□□□□ -1.11
LINC00563-201ENST00000566370 VPS13DQ5THJ4 4388 aa8.11□□□□□ -1.11
LINC00563-201ENST00000566370 MP68P56378 58 aa8.11□□□□□ -1.11
LINC00563-201ENST00000566370 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
LINC00563-201ENST00000566370 SERP1Q9Y6X1 66 aa8.11□□□□□ -1.11
LINC00563-201ENST00000566370 MOBPQ13875 183 aa8.1□□□□□ -1.11
LINC00563-201ENST00000566370 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
LINC00563-201ENST00000566370 LCE6AA0A183 80 aa8.09□□□□□ -1.11
LINC00563-201ENST00000566370 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
LINC00563-201ENST00000566370 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
LINC00563-201ENST00000566370 DNAH10Q8IVF4 4471 aa8.07□□□□□ -1.12
LINC00563-201ENST00000566370 H3BPC8 53 aa8.06□□□□□ -1.12
LINC00563-201ENST00000566370 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
LINC00563-201ENST00000566370 DNAH7Q8WXX0 4024 aa8.05□□□□□ -1.12
LINC00563-201ENST00000566370 CD164Q04900 197 aa8.04□□□□□ -1.12
LINC00563-201ENST00000566370 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
LINC00563-201ENST00000566370 SSBP3-AS1Q7Z2R9 100 aa8.04□□□□□ -1.12
LINC00563-201ENST00000566370 KRTAP29-1A8MX34 341 aaPredicted RBP8.03□□□□□ -1.12
LINC00563-201ENST00000566370 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
LINC00563-201ENST00000566370 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
LINC00563-201ENST00000566370 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
LINC00563-201ENST00000566370 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
LINC00563-201ENST00000566370 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
LINC00563-201ENST00000566370 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
LINC00563-201ENST00000566370 LYSTQ99698 3801 aa8□□□□□ -1.13
LINC00563-201ENST00000566370 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
LINC00563-201ENST00000566370 Q6ZSA8 131 aa8□□□□□ -1.13
LINC00563-201ENST00000566370 PRKDCP78527 4128 aaKnown RBP8□□□□□ -1.13
LINC00563-201ENST00000566370 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
LINC00563-201ENST00000566370 A0A1B0GVX0 72 aa7.98□□□□□ -1.13
LINC00563-201ENST00000566370 H0Y9P7 68 aa7.98□□□□□ -1.13
LINC00563-201ENST00000566370 FAM229BQ4G0N7 80 aa7.98□□□□□ -1.13
LINC00563-201ENST00000566370 Q96NJ1 140 aa7.98□□□□□ -1.13
LINC00563-201ENST00000566370 ZCCHC13Q8WW36 166 aaKnown RBP7.97□□□□□ -1.13
LINC00563-201ENST00000566370 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
LINC00563-201ENST00000566370 ANAPC11Q9NYG5 84 aa7.96□□□□□ -1.13
LINC00563-201ENST00000566370 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
LINC00563-201ENST00000566370 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
LINC00563-201ENST00000566370 IGHV6-1A0A0B4J1U7 121 aa7.95□□□□□ -1.14
LINC00563-201ENST00000566370 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
LINC00563-201ENST00000566370 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
LINC00563-201ENST00000566370 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
LINC00563-201ENST00000566370 DNAH17Q9UFH2 4485 aa7.94□□□□□ -1.14
LINC00563-201ENST00000566370 ASB16-AS1Q495Z4 193 aa7.93□□□□□ -1.14
LINC00563-201ENST00000566370 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
LINC00563-201ENST00000566370 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
LINC00563-201ENST00000566370 FBN3Q75N90 2809 aa7.92□□□□□ -1.14
LINC00563-201ENST00000566370 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
LINC00563-201ENST00000566370 MRPL34Q9BQ48 92 aaKnown RBP7.91□□□□□ -1.14
LINC00563-201ENST00000566370 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
LINC00563-201ENST00000566370 NDUFS5O43920 106 aa7.9□□□□□ -1.14
LINC00563-201ENST00000566370 OXTP01178 125 aa7.9□□□□□ -1.14
LINC00563-201ENST00000566370 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
LINC00563-201ENST00000566370 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
LINC00563-201ENST00000566370 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
LINC00563-201ENST00000566370 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
LINC00563-201ENST00000566370 Q5XG85 94 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms