RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 HAMPP81172 84 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 C10orf113Q5VZT2 155 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 Q6ZTI0 123 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 SPANXA2-OT1Q8N9U9 137 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 LINC00208Q96KT6 92 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 PLCE1Q9P212 2302 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 HSPG2P98160 4391 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 Q6ZR54 194 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 ST20-AS1Q8NBB2 130 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 R4GN34 69 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
CHD9-216ENST00000565803 NDPQ00604 133 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.91□□□□□ -2.1
CHD9-216ENST00000565803 LINC01600Q96MT4 127 aa1.91□□□□□ -2.1
CHD9-216ENST00000565803 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.1
CHD9-216ENST00000565803 A0A087WYN8 130 aa1.9□□□□□ -2.1
CHD9-216ENST00000565803 A0A1B0GU33 70 aa1.9□□□□□ -2.1
CHD9-216ENST00000565803 P0C880 135 aa1.9□□□□□ -2.1
CHD9-216ENST00000565803 ROS1P08922 2347 aa1.9□□□□□ -2.1
CHD9-216ENST00000565803 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 K7EIL1 84 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 LY6EQ16553 131 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 DEFB110Q30KQ9 67 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 WFDC6Q9BQY6 131 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 UQCR11O14957 56 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 IGKV1-17P01599 117 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 KIF25-AS1Q9Y6Z4 181 aa1.9□□□□□ -2.11
CHD9-216ENST00000565803 TRGV2A0A075B6R0 118 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 M0R1W7 72 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 NOTCH3Q9UM47 2321 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 A0A087WSZ3 146 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 ACYP2P14621 99 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 CCL3L1P16619 93 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 RPL37AP61513 92 aaKnown RBP1.89□□□□□ -2.11
CHD9-216ENST00000565803 C9orf163Q8N9P6 203 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 TXNDC17Q9BRA2 123 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 FAT3Q8TDW7 4589 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 TRBV30A0A0K0K1B3 111 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 H0Y9P7 68 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 Q9BRP9 147 aa1.89□□□□□ -2.11
CHD9-216ENST00000565803 TENM3Q9P273 2699 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 IGKV3-7A0A075B6H7 116 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 TRAV40A0A0B4J280 105 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 CLPSL1A2RUU4 121 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 J3QRE1 110 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 KRTAP10-3P60369 221 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 TRBV6-4A0A1B0GX49 114 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 FXYD4P59646 89 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 SERF2P84101 59 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 TMEM263Q8WUH6 116 aaKnown RBP1.88□□□□□ -2.11
CHD9-216ENST00000565803 TTTY12Q9BZ98 90 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 LINC01558Q9Y6Z2 57 aa1.88□□□□□ -2.11
CHD9-216ENST00000565803 A0A0G2JQZ4 141 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 A0A1W2PNM2 257 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 PLNP26678 52 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 KRTAP15-1Q3LI76 137 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 TTTY10Q9BZA0 68 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 COL7A1Q02388 2944 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 ZNF625Q96I27 306 aaPredicted RBP1.87□□□□□ -2.11
CHD9-216ENST00000565803 LINC00846Q9NV44 126 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 ZNF137PP52743 207 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 CCL18P55774 89 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 FXYD3Q14802 87 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 PKD1P98161 4303 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 FAT4Q6V0I7 4981 aa1.87□□□□□ -2.11
CHD9-216ENST00000565803 NDUFA3O95167 84 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 IGKV3-20P01619 116 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 SSBP3-AS1Q7Z2R9 100 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 IGKV2D-24A0A075B6R9 120 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 IGKV3OR2-268A0A0C4DH90 116 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 A0A1B0GU69 56 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 IGLV3-1P01715 115 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 PDE6GP18545 87 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 PRB3Q04118 309 aaPredicted RBP1.86□□□□□ -2.11
CHD9-216ENST00000565803 LINC01590Q5TEZ4 76 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 Q5W150 140 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 TRGV1A0A0A0MS02 117 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 TRBV7-4A0A0J9YYF1 115 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 IGKV3-15P01624 115 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 PDE6HQ13956 83 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 CSMD3Q7Z407 3707 aa1.86□□□□□ -2.11
CHD9-216ENST00000565803 IGKV2-40A0A087WW87 121 aaPredicted RBP1.85□□□□□ -2.11
CHD9-216ENST00000565803 RTL8CO15255 209 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 IGKV2D-40P01614 121 aaPredicted RBP1.85□□□□□ -2.11
CHD9-216ENST00000565803 HRES1P13985 223 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 CNBPP62633 177 aaKnown RBP1.85□□□□□ -2.11
CHD9-216ENST00000565803 IGLV6-57P01721 117 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 SLPIP03973 132 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 IGKV4-1P06312 121 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 MRGPRG-AS1Q2M3A8 158 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 TRBV6-1A0A0K0K1D8 114 aa1.85□□□□□ -2.11
CHD9-216ENST00000565803 HERC1Q15751 4861 aa1.84□□□□□ -2.11
CHD9-216ENST00000565803 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
CHD9-216ENST00000565803 KRTAP29-1A8MX34 341 aaPredicted RBP1.84□□□□□ -2.11
CHD9-216ENST00000565803 NDUFA4O00483 81 aa1.84□□□□□ -2.11
CHD9-216ENST00000565803 SPINK7P58062 85 aa1.84□□□□□ -2.11
CHD9-216ENST00000565803 LINC00304Q8N9R0 145 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms