RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	TEX49	A0A1B0GTD5	131 aa		5.9	□□□□□ -1.46
SIN3A-205	ENST00000564778	KRTAP1-4	P0C5Y4	121 aa		5.9	□□□□□ -1.46
SIN3A-205	ENST00000564778		Q8N377	158 aa		5.9	□□□□□ -1.46
SIN3A-205	ENST00000564778		H3BT86	120 aa		5.89	□□□□□ -1.47
SIN3A-205	ENST00000564778	FAM229B	Q4G0N7	80 aa		5.89	□□□□□ -1.47
SIN3A-205	ENST00000564778	GAGE2A	Q6NT46	116 aa		5.89	□□□□□ -1.47
SIN3A-205	ENST00000564778	LINC01600	Q96MT4	127 aa		5.89	□□□□□ -1.47
SIN3A-205	ENST00000564778		C9JAW5	83 aa		5.88	□□□□□ -1.47
SIN3A-205	ENST00000564778	TMEM256-PLSCR3	K7ERE1	68 aa		5.88	□□□□□ -1.47
SIN3A-205	ENST00000564778	PRO0461	Q9UI25	63 aa		5.88	□□□□□ -1.47
SIN3A-205	ENST00000564778	UBE2V1	Q13404	147 aa		5.87	□□□□□ -1.47
SIN3A-205	ENST00000564778	SMIM29	Q86T20	159 aa		5.87	□□□□□ -1.47
SIN3A-205	ENST00000564778	DEFB105A	Q8NG35	78 aa		5.87	□□□□□ -1.47
SIN3A-205	ENST00000564778	BAALC-AS2	P0C853	105 aa		5.86	□□□□□ -1.47
SIN3A-205	ENST00000564778	SMCP	P49901	116 aa	Predicted RBP	5.85	□□□□□ -1.47
SIN3A-205	ENST00000564778	MTURN	Q8N3F0	131 aa		5.85	□□□□□ -1.47
SIN3A-205	ENST00000564778	ANKRD29	Q8N6D5	301 aa		5.85	□□□□□ -1.47
SIN3A-205	ENST00000564778	LAMTOR3	Q9UHA4	124 aa		5.85	□□□□□ -1.47
SIN3A-205	ENST00000564778	HERC1	Q15751	4861 aa		5.85	□□□□□ -1.47
SIN3A-205	ENST00000564778		F8W1H4	67 aa		5.84	□□□□□ -1.47
SIN3A-205	ENST00000564778	C3orf22	Q8N5N4	141 aa		5.84	□□□□□ -1.47
SIN3A-205	ENST00000564778	ANAPC11	Q9NYG5	84 aa		5.84	□□□□□ -1.47
SIN3A-205	ENST00000564778	IGLV8-61	A0A075B6I0	122 aa		5.83	□□□□□ -1.48
SIN3A-205	ENST00000564778		A0A087X002	238 aa		5.83	□□□□□ -1.48
SIN3A-205	ENST00000564778		J3QL48	77 aa		5.83	□□□□□ -1.48
SIN3A-205	ENST00000564778	CRYGA	P11844	174 aa		5.83	□□□□□ -1.48
SIN3A-205	ENST00000564778	NDUFV3	P56181	108 aa	Known RBP	5.83	□□□□□ -1.48
SIN3A-205	ENST00000564778		F8WEM9	126 aa		5.81	□□□□□ -1.48
SIN3A-205	ENST00000564778	KRTAP13-2	Q52LG2	175 aa		5.81	□□□□□ -1.48
SIN3A-205	ENST00000564778		Q8NBF4	154 aa		5.81	□□□□□ -1.48
SIN3A-205	ENST00000564778	OBSCN-AS1	Q96MR7	158 aa		5.81	□□□□□ -1.48
SIN3A-205	ENST00000564778	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.8	□□□□□ -1.48
SIN3A-205	ENST00000564778	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.8	□□□□□ -1.48
SIN3A-205	ENST00000564778	IGLV9-49	A0A0B4J1Y8	123 aa		5.79	□□□□□ -1.48
SIN3A-205	ENST00000564778	OXT	P01178	125 aa		5.79	□□□□□ -1.48
SIN3A-205	ENST00000564778	MOBP	Q13875	183 aa		5.79	□□□□□ -1.48
SIN3A-205	ENST00000564778		Q6JHZ5	121 aa		5.79	□□□□□ -1.48
SIN3A-205	ENST00000564778	TRBV7-4	A0A0J9YYF1	115 aa		5.78	□□□□□ -1.48
SIN3A-205	ENST00000564778	RBM3	P98179	157 aa	Known RBP	5.78	□□□□□ -1.48
SIN3A-205	ENST00000564778	C9orf153	Q5TBE3	101 aa		5.78	□□□□□ -1.48
SIN3A-205	ENST00000564778	SSBP3-AS1	Q7Z2R9	100 aa		5.78	□□□□□ -1.48
SIN3A-205	ENST00000564778	TEN1	Q86WV5	123 aa		5.78	□□□□□ -1.48
SIN3A-205	ENST00000564778	PRR26	Q8N8Z3	221 aa		5.78	□□□□□ -1.48
SIN3A-205	ENST00000564778	LOC110117498	A0A087WWA1	95 aa		5.77	□□□□□ -1.49
SIN3A-205	ENST00000564778	KRTAP10-8	P60410	259 aa		5.76	□□□□□ -1.49
SIN3A-205	ENST00000564778	ETDB	Q3ZM63	59 aa		5.76	□□□□□ -1.49
SIN3A-205	ENST00000564778	IGFL1	Q6UW32	110 aa		5.76	□□□□□ -1.49
SIN3A-205	ENST00000564778	TYMSOS	Q8TAI1	123 aa		5.76	□□□□□ -1.49
SIN3A-205	ENST00000564778		A0A1B0GV72	72 aa		5.75	□□□□□ -1.49
SIN3A-205	ENST00000564778	PDE6G	P18545	87 aa		5.75	□□□□□ -1.49
SIN3A-205	ENST00000564778	C21orf62-AS1	Q17RA5	79 aa		5.75	□□□□□ -1.49
SIN3A-205	ENST00000564778	DSCR8	Q96T75	97 aa		5.75	□□□□□ -1.49
SIN3A-205	ENST00000564778	MT1HL1	P0DM35	61 aa		5.74	□□□□□ -1.49
SIN3A-205	ENST00000564778		Q6Q795	121 aa		5.74	□□□□□ -1.49
SIN3A-205	ENST00000564778	C14orf132	Q9NPU4	83 aa		5.74	□□□□□ -1.49
SIN3A-205	ENST00000564778	CD164	Q04900	197 aa		5.73	□□□□□ -1.49
SIN3A-205	ENST00000564778		Q6ZQT0	140 aa		5.73	□□□□□ -1.49
SIN3A-205	ENST00000564778		A0A1W2PNM2	257 aa		5.72	□□□□□ -1.49
SIN3A-205	ENST00000564778		A0A0G2JQZ4	141 aa		5.71	□□□□□ -1.5
SIN3A-205	ENST00000564778	LINC00304	Q8N9R0	145 aa		5.71	□□□□□ -1.5
SIN3A-205	ENST00000564778	CCK	P06307	115 aa		5.7	□□□□□ -1.5
SIN3A-205	ENST00000564778	RPS29	P62273	56 aa	Known RBP	5.7	□□□□□ -1.5
SIN3A-205	ENST00000564778	SPAG11A	Q6PDA7	123 aa		5.7	□□□□□ -1.5
SIN3A-205	ENST00000564778	TRBV7-7	A0A0K0K1E9	115 aa		5.69	□□□□□ -1.5
SIN3A-205	ENST00000564778		A0A1B0GW54	56 aa		5.69	□□□□□ -1.5
SIN3A-205	ENST00000564778	SPINK1	P00995	79 aa		5.68	□□□□□ -1.5
SIN3A-205	ENST00000564778		Q5XG85	94 aa		5.68	□□□□□ -1.5
SIN3A-205	ENST00000564778	C4orf48	Q5BLP8	95 aa		5.67	□□□□□ -1.5
SIN3A-205	ENST00000564778	VPS25	Q9BRG1	176 aa		5.66	□□□□□ -1.5
SIN3A-205	ENST00000564778		A0A087WSZ3	146 aa		5.65	□□□□□ -1.5
SIN3A-205	ENST00000564778	FAM240A	A0A1B0GVK7	77 aa		5.65	□□□□□ -1.5
SIN3A-205	ENST00000564778	HRCT1	Q6UXD1	115 aa		5.65	□□□□□ -1.5
SIN3A-205	ENST00000564778	LIMD2	Q9BT23	127 aa		5.65	□□□□□ -1.5
SIN3A-205	ENST00000564778	SS18L2	Q9UHA2	77 aa		5.65	□□□□□ -1.5
SIN3A-205	ENST00000564778	ASB16-AS1	Q495Z4	193 aa		5.64	□□□□□ -1.51
SIN3A-205	ENST00000564778		J3QR89	54 aa		5.62	□□□□□ -1.51
SIN3A-205	ENST00000564778	ACYP1	P07311	99 aa		5.61	□□□□□ -1.51
SIN3A-205	ENST00000564778		Q96NJ1	140 aa		5.59	□□□□□ -1.51
SIN3A-205	ENST00000564778	LINC00846	Q9NV44	126 aa		5.59	□□□□□ -1.51
SIN3A-205	ENST00000564778		K7ERU9	68 aa		5.58	□□□□□ -1.52
SIN3A-205	ENST00000564778	LINC00472	Q9H8W2	130 aa		5.58	□□□□□ -1.52
SIN3A-205	ENST00000564778	HMCN2	Q8NDA2	5059 aa		5.58	□□□□□ -1.52
SIN3A-205	ENST00000564778	UBR4	Q5T4S7	5183 aa		5.57	□□□□□ -1.52
SIN3A-205	ENST00000564778	C1orf195	Q5TG92	126 aa		5.57	□□□□□ -1.52
SIN3A-205	ENST00000564778		Q6ZVQ6	151 aa		5.57	□□□□□ -1.52
SIN3A-205	ENST00000564778	NREP	Q16612	68 aa		5.56	□□□□□ -1.52
SIN3A-205	ENST00000564778	UBL5	Q9BZL1	73 aa		5.56	□□□□□ -1.52
SIN3A-205	ENST00000564778		J3KT08	172 aa		5.54	□□□□□ -1.52
SIN3A-205	ENST00000564778	FP248	Q71RG6	208 aa	Predicted RBP	5.54	□□□□□ -1.52
SIN3A-205	ENST00000564778	RETNLB	Q9BQ08	111 aa		5.53	□□□□□ -1.52
SIN3A-205	ENST00000564778	SIGMAR1	Q99720	223 aa		5.52	□□□□□ -1.53
SIN3A-205	ENST00000564778	IGKV4-1	P06312	121 aa		5.51	□□□□□ -1.53
SIN3A-205	ENST00000564778	ATP5EP2	Q5VTU8	51 aa		5.51	□□□□□ -1.53
SIN3A-205	ENST00000564778	CDIP1	Q9H305	208 aa		5.51	□□□□□ -1.53
SIN3A-205	ENST00000564778	BPY2	O14599	106 aa		5.5	□□□□□ -1.53
SIN3A-205	ENST00000564778	DEFB116	Q30KQ4	102 aa		5.5	□□□□□ -1.53
SIN3A-205	ENST00000564778	LINC00643	Q86TS7	51 aa		5.5	□□□□□ -1.53
SIN3A-205	ENST00000564778		A8MWP4	228 aa		5.49	□□□□□ -1.53
SIN3A-205	ENST00000564778	DSCR10	P59022	87 aa		5.49	□□□□□ -1.53
SIN3A-205	ENST00000564778	CXCL6	P80162	114 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms