RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 C14orf144Q96I85 54 aa10.13□□□□□ -0.79
CLN6-204ENST00000564752 BVES-AS1Q5T3Y7 98 aa10.12□□□□□ -0.79
CLN6-204ENST00000564752 Q5XG85 94 aa10.11□□□□□ -0.79
CLN6-204ENST00000564752 VAMP8Q9BV40 100 aa10.11□□□□□ -0.79
CLN6-204ENST00000564752 CRCT1Q9UGL9 99 aa10.11□□□□□ -0.79
CLN6-204ENST00000564752 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
CLN6-204ENST00000564752 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
CLN6-204ENST00000564752 C9orf92A6NGG3 77 aa10.08□□□□□ -0.8
CLN6-204ENST00000564752 RAB37Q96AX2 223 aa10.08□□□□□ -0.8
CLN6-204ENST00000564752 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.07□□□□□ -0.8
CLN6-204ENST00000564752 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
CLN6-204ENST00000564752 CFC1P0CG37 223 aa10.06□□□□□ -0.8
CLN6-204ENST00000564752 FSIP2Q5CZC0 6907 aa10.05□□□□□ -0.8
CLN6-204ENST00000564752 KRTAP19-2Q3LHN2 52 aa10.05□□□□□ -0.8
CLN6-204ENST00000564752 C1orf195Q5TG92 126 aa10.05□□□□□ -0.8
CLN6-204ENST00000564752 C2orf91Q6ZV80 131 aa10.05□□□□□ -0.8
CLN6-204ENST00000564752 A0A0B4J2C4 111 aa10.04□□□□□ -0.8
CLN6-204ENST00000564752 TCL1BO95988 128 aa10.04□□□□□ -0.8
CLN6-204ENST00000564752 PCOTHQ58A44 107 aa10.04□□□□□ -0.8
CLN6-204ENST00000564752 Q6JHZ5 121 aa10.04□□□□□ -0.8
CLN6-204ENST00000564752 PPDPFLQ8WWR9 84 aa10.03□□□□□ -0.8
CLN6-204ENST00000564752 CLEC2BQ92478 149 aa10.03□□□□□ -0.8
CLN6-204ENST00000564752 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
CLN6-204ENST00000564752 IGFL1Q6UW32 110 aa10.01□□□□□ -0.81
CLN6-204ENST00000564752 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
CLN6-204ENST00000564752 CEND1Q8N111 149 aa10□□□□□ -0.81
CLN6-204ENST00000564752 SNHG12Q9BXW3 62 aa10□□□□□ -0.81
CLN6-204ENST00000564752 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
CLN6-204ENST00000564752 A6NJY4 79 aa9.99□□□□□ -0.81
CLN6-204ENST00000564752 SNCGO76070 127 aa9.99□□□□□ -0.81
CLN6-204ENST00000564752 H0YGX0 51 aa9.98□□□□□ -0.81
CLN6-204ENST00000564752 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
CLN6-204ENST00000564752 MT1HP80294 61 aa9.97□□□□□ -0.81
CLN6-204ENST00000564752 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
CLN6-204ENST00000564752 H3BUT2 72 aa9.94□□□□□ -0.82
CLN6-204ENST00000564752 FXYD2P54710 66 aa9.94□□□□□ -0.82
CLN6-204ENST00000564752 FAM218AQ96MZ4 157 aa9.94□□□□□ -0.82
CLN6-204ENST00000564752 PYY3Q5JQD4 70 aa9.93□□□□□ -0.82
CLN6-204ENST00000564752 A0A1B0GX51 115 aa9.89□□□□□ -0.83
CLN6-204ENST00000564752 HSD52Q0P140 79 aa9.89□□□□□ -0.83
CLN6-204ENST00000564752 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
CLN6-204ENST00000564752 GHRHP01286 108 aa9.88□□□□□ -0.83
CLN6-204ENST00000564752 NDUFV3P56181 108 aaKnown RBP9.88□□□□□ -0.83
CLN6-204ENST00000564752 RPL37P61927 97 aaKnown RBP9.88□□□□□ -0.83
CLN6-204ENST00000564752 TRIAP1O43715 76 aa9.87□□□□□ -0.83
CLN6-204ENST00000564752 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
CLN6-204ENST00000564752 LST1O00453 97 aa9.84□□□□□ -0.83
CLN6-204ENST00000564752 FABP2P12104 132 aa9.84□□□□□ -0.83
CLN6-204ENST00000564752 Q6Q795 121 aa9.84□□□□□ -0.83
CLN6-204ENST00000564752 K7ERJ3 54 aa9.83□□□□□ -0.84
CLN6-204ENST00000564752 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
CLN6-204ENST00000564752 FLGP20930 4061 aaPredicted RBP9.82□□□□□ -0.84
CLN6-204ENST00000564752 H3BMG7 143 aa9.82□□□□□ -0.84
CLN6-204ENST00000564752 PSMB2P49721 201 aa9.82□□□□□ -0.84
CLN6-204ENST00000564752 TEN1Q86WV5 123 aa9.82□□□□□ -0.84
CLN6-204ENST00000564752 UQCR10Q9UDW1 63 aa9.82□□□□□ -0.84
CLN6-204ENST00000564752 DNAL4O96015 105 aa9.81□□□□□ -0.84
CLN6-204ENST00000564752 KRTAP10-6P60371 365 aaPredicted RBP9.81□□□□□ -0.84
CLN6-204ENST00000564752 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
CLN6-204ENST00000564752 A0A087WSZ3 146 aa9.78□□□□□ -0.84
CLN6-204ENST00000564752 COX6CP09669 75 aa9.78□□□□□ -0.84
CLN6-204ENST00000564752 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.85
CLN6-204ENST00000564752 M0R2T5 61 aa9.75□□□□□ -0.85
CLN6-204ENST00000564752 H3BQ85 93 aa9.74□□□□□ -0.85
CLN6-204ENST00000564752 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
CLN6-204ENST00000564752 A0A1B0GV72 72 aa9.72□□□□□ -0.85
CLN6-204ENST00000564752 Q75L30 129 aa9.72□□□□□ -0.85
CLN6-204ENST00000564752 A0A1W2PNM2 257 aa9.71□□□□□ -0.86
CLN6-204ENST00000564752 TMEM256-PLSCR3K7ERE1 68 aa9.7□□□□□ -0.86
CLN6-204ENST00000564752 ANKRD29Q8N6D5 301 aa9.7□□□□□ -0.86
CLN6-204ENST00000564752 Q96NJ1 140 aa9.7□□□□□ -0.86
CLN6-204ENST00000564752 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
CLN6-204ENST00000564752 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
CLN6-204ENST00000564752 TRBV7-4A0A0J9YYF1 115 aa9.66□□□□□ -0.86
CLN6-204ENST00000564752 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
CLN6-204ENST00000564752 TRACP01848 142 aa9.65□□□□□ -0.86
CLN6-204ENST00000564752 UBE2V1Q13404 147 aa9.64□□□□□ -0.87
CLN6-204ENST00000564752 CCKP06307 115 aa9.62□□□□□ -0.87
CLN6-204ENST00000564752 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
CLN6-204ENST00000564752 DSCR10P59022 87 aa9.6□□□□□ -0.87
CLN6-204ENST00000564752 A8MUU9 505 aa9.59□□□□□ -0.87
CLN6-204ENST00000564752 IGKV4-1P06312 121 aa9.59□□□□□ -0.87
CLN6-204ENST00000564752 M0R143 59 aa9.58□□□□□ -0.88
CLN6-204ENST00000564752 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
CLN6-204ENST00000564752 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
CLN6-204ENST00000564752 DSCR8Q96T75 97 aa9.55□□□□□ -0.88
CLN6-204ENST00000564752 SMIM6P0DI80 62 aa9.54□□□□□ -0.88
CLN6-204ENST00000564752 LINC00313P59037 77 aa9.53□□□□□ -0.88
CLN6-204ENST00000564752 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
CLN6-204ENST00000564752 LINC00472Q9H8W2 130 aa9.53□□□□□ -0.88
CLN6-204ENST00000564752 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
CLN6-204ENST00000564752 NAA38Q9BRA0 125 aaKnown RBP9.51□□□□□ -0.89
CLN6-204ENST00000564752 ATXN8Q156A1 80 aa9.5□□□□□ -0.89
CLN6-204ENST00000564752 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
CLN6-204ENST00000564752 C9JAW5 83 aa9.48□□□□□ -0.89
CLN6-204ENST00000564752 IGHV6-1A0A0B4J1U7 121 aa9.47□□□□□ -0.89
CLN6-204ENST00000564752 C21orf62-AS1Q17RA5 79 aa9.46□□□□□ -0.9
CLN6-204ENST00000564752 NOTCH2NLQ7Z3S9 236 aa9.46□□□□□ -0.9
CLN6-204ENST00000564752 KRTAP9-7A8MTY7 169 aa9.45□□□□□ -0.9
CLN6-204ENST00000564752 TRBV20-1A0A075B6N2 111 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms