RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
HERC2-207ENST00000564734 IGFL1Q6UW32 110 aa9.56□□□□□ -0.88
HERC2-207ENST00000564734 Q5XG85 94 aa9.55□□□□□ -0.88
HERC2-207ENST00000564734 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
HERC2-207ENST00000564734 LYSTQ99698 3801 aa9.54□□□□□ -0.88
HERC2-207ENST00000564734 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
HERC2-207ENST00000564734 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
HERC2-207ENST00000564734 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
HERC2-207ENST00000564734 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.52□□□□□ -0.89
HERC2-207ENST00000564734 LCE6AA0A183 80 aa9.51□□□□□ -0.89
HERC2-207ENST00000564734 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
HERC2-207ENST00000564734 K7EQZ3 153 aa9.51□□□□□ -0.89
HERC2-207ENST00000564734 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
HERC2-207ENST00000564734 LRCOL1A6NCL2 159 aa9.5□□□□□ -0.89
HERC2-207ENST00000564734 HIGD2AQ9BW72 106 aa9.5□□□□□ -0.89
HERC2-207ENST00000564734 H0Y9J4 135 aa9.5□□□□□ -0.89
HERC2-207ENST00000564734 C9orf163Q8N9P6 203 aa9.49□□□□□ -0.89
HERC2-207ENST00000564734 FAM30AQ9NZY2 134 aa9.49□□□□□ -0.89
HERC2-207ENST00000564734 SPRR1BP22528 89 aa9.49□□□□□ -0.89
HERC2-207ENST00000564734 ATP5EP56381 51 aaPredicted RBP9.48□□□□□ -0.89
HERC2-207ENST00000564734 PKIGQ9Y2B9 76 aa9.46□□□□□ -0.9
HERC2-207ENST00000564734 UBE2AP49459 152 aa9.45□□□□□ -0.9
HERC2-207ENST00000564734 Q6ZRN7 208 aaPredicted RBP9.45□□□□□ -0.9
HERC2-207ENST00000564734 NBDYA0A0U1RRE5 68 aa9.45□□□□□ -0.9
HERC2-207ENST00000564734 A0A087WSZ3 146 aa9.44□□□□□ -0.9
HERC2-207ENST00000564734 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
HERC2-207ENST00000564734 DNAH7Q8WXX0 4024 aa9.43□□□□□ -0.9
HERC2-207ENST00000564734 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
HERC2-207ENST00000564734 PANO1I0J062 215 aa9.42□□□□□ -0.9
HERC2-207ENST00000564734 DEFB116Q30KQ4 102 aa9.42□□□□□ -0.9
HERC2-207ENST00000564734 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
HERC2-207ENST00000564734 LINC00336Q6ZUF6 198 aa9.41□□□□□ -0.9
HERC2-207ENST00000564734 KRTAP13-1Q8IUC0 172 aa9.4□□□□□ -0.9
HERC2-207ENST00000564734 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.91
HERC2-207ENST00000564734 FP248Q71RG6 208 aaPredicted RBP9.39□□□□□ -0.91
HERC2-207ENST00000564734 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
HERC2-207ENST00000564734 CSMD3Q7Z407 3707 aa9.39□□□□□ -0.91
HERC2-207ENST00000564734 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
HERC2-207ENST00000564734 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
HERC2-207ENST00000564734 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
HERC2-207ENST00000564734 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
HERC2-207ENST00000564734 RPL37AP61513 92 aaKnown RBP9.36□□□□□ -0.91
HERC2-207ENST00000564734 VPS13DQ5THJ4 4388 aa9.36□□□□□ -0.91
HERC2-207ENST00000564734 BRK1Q8WUW1 75 aa9.35□□□□□ -0.91
HERC2-207ENST00000564734 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
HERC2-207ENST00000564734 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
HERC2-207ENST00000564734 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
HERC2-207ENST00000564734 LY6G6CO95867 125 aa9.32□□□□□ -0.92
HERC2-207ENST00000564734 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
HERC2-207ENST00000564734 FAM229BQ4G0N7 80 aa9.32□□□□□ -0.92
HERC2-207ENST00000564734 PRR15Q8IV56 129 aa9.31□□□□□ -0.92
HERC2-207ENST00000564734 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
HERC2-207ENST00000564734 A8MWP4 228 aa9.29□□□□□ -0.92
HERC2-207ENST00000564734 A0A087WTM6 91 aa9.28□□□□□ -0.92
HERC2-207ENST00000564734 LINC00483Q53H64 154 aa9.26□□□□□ -0.93
HERC2-207ENST00000564734 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
HERC2-207ENST00000564734 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
HERC2-207ENST00000564734 hDV103S1A0JD37 113 aa9.25□□□□□ -0.93
HERC2-207ENST00000564734 Q96NJ1 140 aa9.23□□□□□ -0.93
HERC2-207ENST00000564734 PRO0628Q9UI54 55 aa9.23□□□□□ -0.93
HERC2-207ENST00000564734 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
HERC2-207ENST00000564734 DNAH17Q9UFH2 4485 aa9.22□□□□□ -0.93
HERC2-207ENST00000564734 MP68P56378 58 aa9.21□□□□□ -0.93
HERC2-207ENST00000564734 Q6ZR54 194 aa9.21□□□□□ -0.93
HERC2-207ENST00000564734 TRAV22A0A0B4J277 110 aa9.21□□□□□ -0.94
HERC2-207ENST00000564734 PRR4Q16378 134 aa9.21□□□□□ -0.94
HERC2-207ENST00000564734 MMP24-AS1A0A0U1RRL7 71 aa9.2□□□□□ -0.94
HERC2-207ENST00000564734 C1orf64Q8NEQ6 169 aa9.2□□□□□ -0.94
HERC2-207ENST00000564734 RTL8CO15255 209 aa9.2□□□□□ -0.94
HERC2-207ENST00000564734 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
HERC2-207ENST00000564734 NDUFB1O75438 58 aa9.19□□□□□ -0.94
HERC2-207ENST00000564734 SEC61GP60059 68 aa9.19□□□□□ -0.94
HERC2-207ENST00000564734 IGLV5-52A0A0A0MRZ9 124 aa9.19□□□□□ -0.94
HERC2-207ENST00000564734 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
HERC2-207ENST00000564734 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 H3BPC8 53 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 LINC00208Q96KT6 92 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 DNAH2Q9P225 4427 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 HECTD4Q9Y4D8 3996 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 H0Y9P7 68 aa9.18□□□□□ -0.94
HERC2-207ENST00000564734 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
HERC2-207ENST00000564734 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
HERC2-207ENST00000564734 MOBPQ13875 183 aa9.16□□□□□ -0.94
HERC2-207ENST00000564734 ZNF861PO60384 105 aa9.13□□□□□ -0.95
HERC2-207ENST00000564734 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
HERC2-207ENST00000564734 KMT2AQ03164 3969 aa9.12□□□□□ -0.95
HERC2-207ENST00000564734 SPANXA2-OT1Q8N9U9 137 aa9.11□□□□□ -0.95
HERC2-207ENST00000564734 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
HERC2-207ENST00000564734 Q1T7F1 81 aa9.09□□□□□ -0.95
HERC2-207ENST00000564734 C8orf17Q9NRJ1 99 aa9.09□□□□□ -0.95
HERC2-207ENST00000564734 C1orf195Q5TG92 126 aa9.08□□□□□ -0.96
HERC2-207ENST00000564734 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
HERC2-207ENST00000564734 PSPHP1O15172 72 aa9.08□□□□□ -0.96
HERC2-207ENST00000564734 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
HERC2-207ENST00000564734 A0A1B0GVX0 72 aa9.06□□□□□ -0.96
HERC2-207ENST00000564734 TP53AIP1Q9HCN2 124 aa9.05□□□□□ -0.96
HERC2-207ENST00000564734 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
HERC2-207ENST00000564734 V9GYY9 64 aa9.02□□□□□ -0.96
HERC2-207ENST00000564734 IGHV6-1A0A0B4J1U7 121 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms