RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
GTF3C1-204ENST00000564664 VAMP3Q15836 100 aa6.76□□□□□ -1.33
GTF3C1-204ENST00000564664 TRBV7-6A0A0J9YX20 115 aa6.75□□□□□ -1.33
GTF3C1-204ENST00000564664 COX7BP24311 80 aa6.75□□□□□ -1.33
GTF3C1-204ENST00000564664 ELOF1P60002 83 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-204ENST00000564664 FXYD2P54710 66 aa6.74□□□□□ -1.33
GTF3C1-204ENST00000564664 CD164Q04900 197 aa6.74□□□□□ -1.33
GTF3C1-204ENST00000564664 IFITM1P13164 125 aa6.73□□□□□ -1.33
GTF3C1-204ENST00000564664 C6orf99Q4VX62 202 aa6.73□□□□□ -1.33
GTF3C1-204ENST00000564664 Q6ZVH6 145 aa6.73□□□□□ -1.33
GTF3C1-204ENST00000564664 HIST1H4GQ99525 98 aa6.73□□□□□ -1.33
GTF3C1-204ENST00000564664 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
GTF3C1-204ENST00000564664 A0A1W2PPM0 123 aa6.72□□□□□ -1.33
GTF3C1-204ENST00000564664 K7EP34 96 aa6.72□□□□□ -1.33
GTF3C1-204ENST00000564664 FABP2P12104 132 aa6.72□□□□□ -1.33
GTF3C1-204ENST00000564664 TTTY13Q9BZ97 58 aa6.72□□□□□ -1.33
GTF3C1-204ENST00000564664 SCGB1D4Q6XE38 83 aa6.71□□□□□ -1.34
GTF3C1-204ENST00000564664 A4D1N5 150 aa6.7□□□□□ -1.34
GTF3C1-204ENST00000564664 H3BUT2 72 aa6.7□□□□□ -1.34
GTF3C1-204ENST00000564664 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
GTF3C1-204ENST00000564664 Q5XG85 94 aa6.7□□□□□ -1.34
GTF3C1-204ENST00000564664 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
GTF3C1-204ENST00000564664 LYRM7Q5U5X0 104 aa6.69□□□□□ -1.34
GTF3C1-204ENST00000564664 HRCT1Q6UXD1 115 aa6.68□□□□□ -1.34
GTF3C1-204ENST00000564664 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
GTF3C1-204ENST00000564664 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
GTF3C1-204ENST00000564664 H7C2G1 150 aa6.67□□□□□ -1.34
GTF3C1-204ENST00000564664 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
GTF3C1-204ENST00000564664 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
GTF3C1-204ENST00000564664 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
GTF3C1-204ENST00000564664 A0A0B4J2C4 111 aa6.66□□□□□ -1.34
GTF3C1-204ENST00000564664 F8W1H4 67 aa6.66□□□□□ -1.34
GTF3C1-204ENST00000564664 Q1RN00 199 aa6.66□□□□□ -1.34
GTF3C1-204ENST00000564664 SMIM29Q86T20 159 aa6.66□□□□□ -1.34
GTF3C1-204ENST00000564664 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.34
GTF3C1-204ENST00000564664 TRBV20-1A0A075B6N2 111 aa6.64□□□□□ -1.35
GTF3C1-204ENST00000564664 K7ERU9 68 aa6.64□□□□□ -1.35
GTF3C1-204ENST00000564664 RAB37Q96AX2 223 aa6.64□□□□□ -1.35
GTF3C1-204ENST00000564664 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
GTF3C1-204ENST00000564664 CFC1BP0CG36 223 aa6.62□□□□□ -1.35
GTF3C1-204ENST00000564664 CFC1P0CG37 223 aa6.62□□□□□ -1.35
GTF3C1-204ENST00000564664 OCIAD2Q56VL3 154 aa6.62□□□□□ -1.35
GTF3C1-204ENST00000564664 PCOTHQ58A44 107 aa6.62□□□□□ -1.35
GTF3C1-204ENST00000564664 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
GTF3C1-204ENST00000564664 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
GTF3C1-204ENST00000564664 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
GTF3C1-204ENST00000564664 IGLV8-61A0A075B6I0 122 aa6.6□□□□□ -1.35
GTF3C1-204ENST00000564664 K7ERJ3 54 aa6.6□□□□□ -1.35
GTF3C1-204ENST00000564664 TCL1BO95988 128 aa6.6□□□□□ -1.35
GTF3C1-204ENST00000564664 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
GTF3C1-204ENST00000564664 PRO0461Q9UI25 63 aa6.58□□□□□ -1.36
GTF3C1-204ENST00000564664 F8WEM9 126 aa6.57□□□□□ -1.36
GTF3C1-204ENST00000564664 J3QR89 54 aa6.57□□□□□ -1.36
GTF3C1-204ENST00000564664 H3BMG7 143 aa6.56□□□□□ -1.36
GTF3C1-204ENST00000564664 LINC00575Q6W349 94 aa6.56□□□□□ -1.36
GTF3C1-204ENST00000564664 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
GTF3C1-204ENST00000564664 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
GTF3C1-204ENST00000564664 Q6JHZ5 121 aa6.55□□□□□ -1.36
GTF3C1-204ENST00000564664 hADV29S1A0JD25 119 aa6.54□□□□□ -1.36
GTF3C1-204ENST00000564664 A0A0G2JQZ4 141 aa6.53□□□□□ -1.36
GTF3C1-204ENST00000564664 COX6CP09669 75 aa6.53□□□□□ -1.36
GTF3C1-204ENST00000564664 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
GTF3C1-204ENST00000564664 MT1HP80294 61 aa6.52□□□□□ -1.37
GTF3C1-204ENST00000564664 PPDPFLQ8WWR9 84 aa6.52□□□□□ -1.37
GTF3C1-204ENST00000564664 ATXN8Q156A1 80 aa6.51□□□□□ -1.37
GTF3C1-204ENST00000564664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.51□□□□□ -1.37
GTF3C1-204ENST00000564664 Q6ZQY7 126 aa6.51□□□□□ -1.37
GTF3C1-204ENST00000564664 SCGB1C2P0DMR2 95 aa6.5□□□□□ -1.37
GTF3C1-204ENST00000564664 CLEC2BQ92478 149 aa6.5□□□□□ -1.37
GTF3C1-204ENST00000564664 TRBV7-7A0A0K0K1E9 115 aa6.49□□□□□ -1.37
GTF3C1-204ENST00000564664 PSMB2P49721 201 aa6.49□□□□□ -1.37
GTF3C1-204ENST00000564664 TEN1Q86WV5 123 aa6.49□□□□□ -1.37
GTF3C1-204ENST00000564664 H3BT86 120 aa6.47□□□□□ -1.37
GTF3C1-204ENST00000564664 SNCGO76070 127 aa6.47□□□□□ -1.37
GTF3C1-204ENST00000564664 ETDBQ3ZM63 59 aa6.47□□□□□ -1.37
GTF3C1-204ENST00000564664 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
GTF3C1-204ENST00000564664 VPS25Q9BRG1 176 aa6.47□□□□□ -1.37
GTF3C1-204ENST00000564664 LST1O00453 97 aa6.46□□□□□ -1.38
GTF3C1-204ENST00000564664 TRIAP1O43715 76 aa6.46□□□□□ -1.38
GTF3C1-204ENST00000564664 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
GTF3C1-204ENST00000564664 FSIP2Q5CZC0 6907 aa6.44□□□□□ -1.38
GTF3C1-204ENST00000564664 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
GTF3C1-204ENST00000564664 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
GTF3C1-204ENST00000564664 ANKRD29Q8N6D5 301 aa6.44□□□□□ -1.38
GTF3C1-204ENST00000564664 TRACP01848 142 aa6.43□□□□□ -1.38
GTF3C1-204ENST00000564664 ATP11AUNQ6ZP68 121 aa6.43□□□□□ -1.38
GTF3C1-204ENST00000564664 Q75L30 129 aa6.43□□□□□ -1.38
GTF3C1-204ENST00000564664 H0YGX0 51 aa6.42□□□□□ -1.38
GTF3C1-204ENST00000564664 M0R2T5 61 aa6.42□□□□□ -1.38
GTF3C1-204ENST00000564664 GHRHP01286 108 aa6.42□□□□□ -1.38
GTF3C1-204ENST00000564664 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
GTF3C1-204ENST00000564664 Q6Q795 121 aa6.42□□□□□ -1.38
GTF3C1-204ENST00000564664 A0A1B0GX51 115 aa6.41□□□□□ -1.38
GTF3C1-204ENST00000564664 C9JAW5 83 aa6.41□□□□□ -1.38
GTF3C1-204ENST00000564664 SS18L2Q9UHA2 77 aa6.41□□□□□ -1.38
GTF3C1-204ENST00000564664 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.38
GTF3C1-204ENST00000564664 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
GTF3C1-204ENST00000564664 FAM240AA0A1B0GVK7 77 aa6.39□□□□□ -1.39
GTF3C1-204ENST00000564664 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
GTF3C1-204ENST00000564664 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms