RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SCXQ7RTU7 201 aa9.56□□□□□ -0.88
COMMD4-210ENST00000564587 LINC00643Q86TS7 51 aa9.55□□□□□ -0.88
COMMD4-210ENST00000564587 FRAS1Q86XX4 4008 aa9.55□□□□□ -0.88
COMMD4-210ENST00000564587 SMIM29Q86T20 159 aa9.54□□□□□ -0.88
COMMD4-210ENST00000564587 XGP55808 180 aa9.53□□□□□ -0.88
COMMD4-210ENST00000564587 IGLV8-61A0A075B6I0 122 aa9.52□□□□□ -0.89
COMMD4-210ENST00000564587 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
COMMD4-210ENST00000564587 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
COMMD4-210ENST00000564587 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
COMMD4-210ENST00000564587 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
COMMD4-210ENST00000564587 LINC00846Q9NV44 126 aa9.51□□□□□ -0.89
COMMD4-210ENST00000564587 Q6JHZ5 121 aa9.5□□□□□ -0.89
COMMD4-210ENST00000564587 SPRR4Q96PI1 79 aa9.5□□□□□ -0.89
COMMD4-210ENST00000564587 KIAA1109Q2LD37 5005 aa9.48□□□□□ -0.89
COMMD4-210ENST00000564587 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
COMMD4-210ENST00000564587 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
COMMD4-210ENST00000564587 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
COMMD4-210ENST00000564587 IMUPQ9GZP8 106 aa9.47□□□□□ -0.89
COMMD4-210ENST00000564587 SCGB1A1P11684 91 aa9.46□□□□□ -0.9
COMMD4-210ENST00000564587 RPL37AP61513 92 aaKnown RBP9.46□□□□□ -0.9
COMMD4-210ENST00000564587 Q6Q795 121 aa9.46□□□□□ -0.9
COMMD4-210ENST00000564587 Q8NBF4 154 aa9.46□□□□□ -0.9
COMMD4-210ENST00000564587 DNAH11Q96DT5 4516 aa9.46□□□□□ -0.9
COMMD4-210ENST00000564587 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
COMMD4-210ENST00000564587 FAT2Q9NYQ8 4349 aa9.43□□□□□ -0.9
COMMD4-210ENST00000564587 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
COMMD4-210ENST00000564587 A0A1W2PNM2 257 aa9.42□□□□□ -0.9
COMMD4-210ENST00000564587 IGFL1Q6UW32 110 aa9.42□□□□□ -0.9
COMMD4-210ENST00000564587 CRYGAP11844 174 aa9.41□□□□□ -0.9
COMMD4-210ENST00000564587 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
COMMD4-210ENST00000564587 Q6ZVQ6 151 aa9.4□□□□□ -0.9
COMMD4-210ENST00000564587 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.91
COMMD4-210ENST00000564587 NREPQ16612 68 aa9.39□□□□□ -0.91
COMMD4-210ENST00000564587 PKD1P98161 4303 aa9.39□□□□□ -0.91
COMMD4-210ENST00000564587 HAMPP81172 84 aa9.37□□□□□ -0.91
COMMD4-210ENST00000564587 CXCL6P80162 114 aa9.36□□□□□ -0.91
COMMD4-210ENST00000564587 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
COMMD4-210ENST00000564587 IGKV3D-7A0A0C4DH55 119 aa9.34□□□□□ -0.91
COMMD4-210ENST00000564587 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
COMMD4-210ENST00000564587 FAM229BQ4G0N7 80 aa9.33□□□□□ -0.92
COMMD4-210ENST00000564587 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
COMMD4-210ENST00000564587 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
COMMD4-210ENST00000564587 BPY2O14599 106 aa9.29□□□□□ -0.92
COMMD4-210ENST00000564587 MOBPQ13875 183 aa9.29□□□□□ -0.92
COMMD4-210ENST00000564587 A0A087WSZ3 146 aa9.28□□□□□ -0.92
COMMD4-210ENST00000564587 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
COMMD4-210ENST00000564587 HIST1H4AP62805 103 aaKnown RBP9.26□□□□□ -0.93
COMMD4-210ENST00000564587 CD164Q04900 197 aa9.26□□□□□ -0.93
COMMD4-210ENST00000564587 ANAPC11Q9NYG5 84 aa9.26□□□□□ -0.93
COMMD4-210ENST00000564587 SS18L2Q9UHA2 77 aa9.26□□□□□ -0.93
COMMD4-210ENST00000564587 PCP4P48539 62 aa9.24□□□□□ -0.93
COMMD4-210ENST00000564587 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
COMMD4-210ENST00000564587 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
COMMD4-210ENST00000564587 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
COMMD4-210ENST00000564587 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
COMMD4-210ENST00000564587 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
COMMD4-210ENST00000564587 J3KT08 172 aa9.2□□□□□ -0.94
COMMD4-210ENST00000564587 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
COMMD4-210ENST00000564587 LRP1BQ9NZR2 4599 aa9.19□□□□□ -0.94
COMMD4-210ENST00000564587 PLA2G1BP04054 148 aaKnown RBP9.19□□□□□ -0.94
COMMD4-210ENST00000564587 HERC1Q15751 4861 aa9.19□□□□□ -0.94
COMMD4-210ENST00000564587 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
COMMD4-210ENST00000564587 SRRM2Q9UQ35 2752 aaKnown RBP9.18□□□□□ -0.94
COMMD4-210ENST00000564587 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
COMMD4-210ENST00000564587 ATOX1O00244 68 aa9.17□□□□□ -0.94
COMMD4-210ENST00000564587 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
COMMD4-210ENST00000564587 A0A087WVE0 104 aa9.16□□□□□ -0.94
COMMD4-210ENST00000564587 A0A087X002 238 aa9.16□□□□□ -0.94
COMMD4-210ENST00000564587 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
COMMD4-210ENST00000564587 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
COMMD4-210ENST00000564587 DSCR10P59022 87 aa9.14□□□□□ -0.95
COMMD4-210ENST00000564587 KRTAP10-4P60372 401 aaPredicted RBP9.14□□□□□ -0.95
COMMD4-210ENST00000564587 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
COMMD4-210ENST00000564587 HRCT1Q6UXD1 115 aa9.14□□□□□ -0.95
COMMD4-210ENST00000564587 PKHD1P08F94 4074 aa9.13□□□□□ -0.95
COMMD4-210ENST00000564587 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
COMMD4-210ENST00000564587 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
COMMD4-210ENST00000564587 Q5XG85 94 aa9.11□□□□□ -0.95
COMMD4-210ENST00000564587 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
COMMD4-210ENST00000564587 A8MWP4 228 aa9.1□□□□□ -0.95
COMMD4-210ENST00000564587 NDUFB1O75438 58 aa9.1□□□□□ -0.95
COMMD4-210ENST00000564587 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
COMMD4-210ENST00000564587 Q8N9L7 120 aa9.09□□□□□ -0.95
COMMD4-210ENST00000564587 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
COMMD4-210ENST00000564587 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
COMMD4-210ENST00000564587 K7EQZ3 153 aa9.07□□□□□ -0.96
COMMD4-210ENST00000564587 DEFB116Q30KQ4 102 aa9.07□□□□□ -0.96
COMMD4-210ENST00000564587 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
COMMD4-210ENST00000564587 Q96NJ1 140 aa9.07□□□□□ -0.96
COMMD4-210ENST00000564587 SPINK1P00995 79 aa9.06□□□□□ -0.96
COMMD4-210ENST00000564587 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
COMMD4-210ENST00000564587 APOBP04114 4563 aaKnown RBP9.05□□□□□ -0.96
COMMD4-210ENST00000564587 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
COMMD4-210ENST00000564587 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
COMMD4-210ENST00000564587 Q5VSD8 79 aa9.03□□□□□ -0.96
COMMD4-210ENST00000564587 SERP2Q8N6R1 65 aa9.03□□□□□ -0.96
COMMD4-210ENST00000564587 PRR26Q8N8Z3 221 aa9.03□□□□□ -0.96
COMMD4-210ENST00000564587 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.96
COMMD4-210ENST00000564587 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
COMMD4-210ENST00000564587 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms