RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 Q6JHZ5 121 aa10.95□□□□□ -0.66
HERC2-204ENST00000563945 ANKRD39Q53RE8 183 aa10.92□□□□□ -0.66
HERC2-204ENST00000563945 OBSCN-AS1Q96MR7 158 aa10.92□□□□□ -0.66
HERC2-204ENST00000563945 FLGP20930 4061 aaPredicted RBP10.91□□□□□ -0.66
HERC2-204ENST00000563945 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.66
HERC2-204ENST00000563945 CLEC2BQ92478 149 aa10.9□□□□□ -0.66
HERC2-204ENST00000563945 hADV29S1A0JD25 119 aa10.88□□□□□ -0.67
HERC2-204ENST00000563945 LINC00575Q6W349 94 aa10.88□□□□□ -0.67
HERC2-204ENST00000563945 Q6ZQY7 126 aa10.88□□□□□ -0.67
HERC2-204ENST00000563945 Q75L30 129 aa10.88□□□□□ -0.67
HERC2-204ENST00000563945 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
HERC2-204ENST00000563945 OCIAD2Q56VL3 154 aa10.87□□□□□ -0.67
HERC2-204ENST00000563945 IGFL1Q6UW32 110 aa10.86□□□□□ -0.67
HERC2-204ENST00000563945 LST1O00453 97 aa10.83□□□□□ -0.68
HERC2-204ENST00000563945 Q96NJ1 140 aa10.83□□□□□ -0.68
HERC2-204ENST00000563945 SNHG12Q9BXW3 62 aa10.82□□□□□ -0.68
HERC2-204ENST00000563945 CFC1P0CG37 223 aa10.81□□□□□ -0.68
HERC2-204ENST00000563945 SNRPEP62304 92 aaKnown RBP10.8□□□□□ -0.68
HERC2-204ENST00000563945 COA6Q5JTJ3 125 aaKnown RBP10.8□□□□□ -0.68
HERC2-204ENST00000563945 TRBV20-1A0A075B6N2 111 aa10.79□□□□□ -0.68
HERC2-204ENST00000563945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.78□□□□□ -0.68
HERC2-204ENST00000563945 SCGB1D1O95968 90 aa10.77□□□□□ -0.69
HERC2-204ENST00000563945 PPDPFLQ8WWR9 84 aa10.77□□□□□ -0.69
HERC2-204ENST00000563945 SS18L2Q9UHA2 77 aa10.75□□□□□ -0.69
HERC2-204ENST00000563945 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
HERC2-204ENST00000563945 KRTAP9-7A8MTY7 169 aa10.72□□□□□ -0.69
HERC2-204ENST00000563945 H3BUT2 72 aa10.72□□□□□ -0.69
HERC2-204ENST00000563945 HSBP1L1C9JCN9 74 aa10.71□□□□□ -0.69
HERC2-204ENST00000563945 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.7□□□□□ -0.7
HERC2-204ENST00000563945 SNCGO76070 127 aa10.69□□□□□ -0.7
HERC2-204ENST00000563945 C20orf166-AS1Q96NR2 134 aa10.68□□□□□ -0.7
HERC2-204ENST00000563945 C12orf57Q99622 126 aa10.68□□□□□ -0.7
HERC2-204ENST00000563945 A8MUU9 505 aa10.66□□□□□ -0.7
HERC2-204ENST00000563945 KRTAP9-8Q9BYQ0 159 aa10.66□□□□□ -0.7
HERC2-204ENST00000563945 TEN1Q86WV5 123 aa10.64□□□□□ -0.71
HERC2-204ENST00000563945 FAM236DA0A1B0GTK5 79 aa10.63□□□□□ -0.71
HERC2-204ENST00000563945 FAM236CP0DP71 79 aa10.63□□□□□ -0.71
HERC2-204ENST00000563945 HIST1H4GQ99525 98 aa10.63□□□□□ -0.71
HERC2-204ENST00000563945 USH2AO75445 5202 aa10.61□□□□□ -0.71
HERC2-204ENST00000563945 A0A087WSZ3 146 aa10.59□□□□□ -0.71
HERC2-204ENST00000563945 S100A2P29034 98 aa10.59□□□□□ -0.71
HERC2-204ENST00000563945 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
HERC2-204ENST00000563945 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
HERC2-204ENST00000563945 DSCR10P59022 87 aa10.57□□□□□ -0.72
HERC2-204ENST00000563945 H0YGX0 51 aa10.55□□□□□ -0.72
HERC2-204ENST00000563945 GHRHP01286 108 aa10.55□□□□□ -0.72
HERC2-204ENST00000563945 SIGMAR1Q99720 223 aa10.55□□□□□ -0.72
HERC2-204ENST00000563945 RAB37Q96AX2 223 aa10.54□□□□□ -0.72
HERC2-204ENST00000563945 H3BMG7 143 aa10.53□□□□□ -0.72
HERC2-204ENST00000563945 RBM12B-AS1Q9P1G2 102 aa10.53□□□□□ -0.72
HERC2-204ENST00000563945 LINC00313P59037 77 aa10.52□□□□□ -0.73
HERC2-204ENST00000563945 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.73
HERC2-204ENST00000563945 FABP2P12104 132 aa10.51□□□□□ -0.73
HERC2-204ENST00000563945 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
HERC2-204ENST00000563945 MT2AP02795 61 aa10.49□□□□□ -0.73
HERC2-204ENST00000563945 IGKV4-1P06312 121 aa10.45□□□□□ -0.74
HERC2-204ENST00000563945 COX8AP10176 69 aa10.45□□□□□ -0.74
HERC2-204ENST00000563945 KRTAP10-10P60014 251 aa10.45□□□□□ -0.74
HERC2-204ENST00000563945 FAM218AQ96MZ4 157 aa10.44□□□□□ -0.74
HERC2-204ENST00000563945 FCGBPQ9Y6R7 5405 aaPredicted RBP10.42□□□□□ -0.74
HERC2-204ENST00000563945 A0A1B0GX51 115 aa10.42□□□□□ -0.74
HERC2-204ENST00000563945 KRTAP16-1A8MUX0 517 aa10.42□□□□□ -0.74
HERC2-204ENST00000563945 S100A6P06703 90 aa10.42□□□□□ -0.74
HERC2-204ENST00000563945 A0A1W2PNM2 257 aa10.41□□□□□ -0.74
HERC2-204ENST00000563945 KRTAP19-1Q8IUB9 90 aa10.41□□□□□ -0.74
HERC2-204ENST00000563945 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
HERC2-204ENST00000563945 DLEU1O43261 78 aa10.4□□□□□ -0.74
HERC2-204ENST00000563945 MT1FP04733 61 aa10.4□□□□□ -0.74
HERC2-204ENST00000563945 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
HERC2-204ENST00000563945 LCE2BO14633 110 aa10.37□□□□□ -0.75
HERC2-204ENST00000563945 HRES1P13985 223 aa10.37□□□□□ -0.75
HERC2-204ENST00000563945 MTURNQ8N3F0 131 aa10.37□□□□□ -0.75
HERC2-204ENST00000563945 TRBV7-4A0A0J9YYF1 115 aa10.36□□□□□ -0.75
HERC2-204ENST00000563945 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
HERC2-204ENST00000563945 LINC00846Q9NV44 126 aa10.36□□□□□ -0.75
HERC2-204ENST00000563945 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
HERC2-204ENST00000563945 KRTAP9-3Q9BYQ3 159 aa10.34□□□□□ -0.75
HERC2-204ENST00000563945 HIGD1BQ9P298 99 aa10.34□□□□□ -0.75
HERC2-204ENST00000563945 IGHV6-1A0A0B4J1U7 121 aa10.33□□□□□ -0.76
HERC2-204ENST00000563945 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
HERC2-204ENST00000563945 PRO1854Q9UHT4 67 aa10.33□□□□□ -0.76
HERC2-204ENST00000563945 DNAL4O96015 105 aa10.32□□□□□ -0.76
HERC2-204ENST00000563945 NOTCH2NLQ7Z3S9 236 aa10.32□□□□□ -0.76
HERC2-204ENST00000563945 A0A1B0GV72 72 aa10.31□□□□□ -0.76
HERC2-204ENST00000563945 TMEM238LA0A1B0GVL6 79 aa10.31□□□□□ -0.76
HERC2-204ENST00000563945 A6NJY4 79 aa10.31□□□□□ -0.76
HERC2-204ENST00000563945 H3BQ85 93 aa10.31□□□□□ -0.76
HERC2-204ENST00000563945 TRACP01848 142 aa10.29□□□□□ -0.76
HERC2-204ENST00000563945 ORMDL1Q9P0S3 153 aa10.29□□□□□ -0.76
HERC2-204ENST00000563945 CEND1Q8N111 149 aa10.27□□□□□ -0.77
HERC2-204ENST00000563945 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.77
HERC2-204ENST00000563945 CCKP06307 115 aa10.26□□□□□ -0.77
HERC2-204ENST00000563945 PAM16Q9Y3D7 125 aa10.26□□□□□ -0.77
HERC2-204ENST00000563945 TMEM256-PLSCR3K7ERE1 68 aa10.25□□□□□ -0.77
HERC2-204ENST00000563945 TRIAP1O43715 76 aa10.25□□□□□ -0.77
HERC2-204ENST00000563945 SPATA45Q537H7 98 aa10.25□□□□□ -0.77
HERC2-204ENST00000563945 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
HERC2-204ENST00000563945 S100A1P23297 94 aa10.23□□□□□ -0.77
HERC2-204ENST00000563945 PSMB2P49721 201 aa10.22□□□□□ -0.77
HERC2-204ENST00000563945 C2orf91Q6ZV80 131 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms