RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 CASC10Q5T4H9 136 aa8.27□□□□□ -1.09
CCDC187-201ENST00000563590 NDUFS5O43920 106 aa8.26□□□□□ -1.09
CCDC187-201ENST00000563590 UBE2AP49459 152 aa8.25□□□□□ -1.09
CCDC187-201ENST00000563590 DSCR10P59022 87 aa8.25□□□□□ -1.09
CCDC187-201ENST00000563590 PRLHP81277 87 aa8.25□□□□□ -1.09
CCDC187-201ENST00000563590 Q1T7F1 81 aa8.24□□□□□ -1.09
CCDC187-201ENST00000563590 C15orf56Q8N910 161 aa8.24□□□□□ -1.09
CCDC187-201ENST00000563590 MDFIQ99750 246 aa8.24□□□□□ -1.09
CCDC187-201ENST00000563590 Q6ZRX8 168 aa8.24□□□□□ -1.09
CCDC187-201ENST00000563590 LINC00476Q8WZB0 136 aa8.24□□□□□ -1.09
CCDC187-201ENST00000563590 CASC2Q6XLA1 102 aa8.22□□□□□ -1.09
CCDC187-201ENST00000563590 Q9BRP9 147 aa8.21□□□□□ -1.09
CCDC187-201ENST00000563590 SPAG11AQ6PDA7 123 aa8.21□□□□□ -1.1
CCDC187-201ENST00000563590 IGLV5-48A0A075B6I7 105 aa8.19□□□□□ -1.1
CCDC187-201ENST00000563590 KCNQ1DNQ9H478 68 aa8.19□□□□□ -1.1
CCDC187-201ENST00000563590 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
CCDC187-201ENST00000563590 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
CCDC187-201ENST00000563590 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
CCDC187-201ENST00000563590 CD164Q04900 197 aa8.16□□□□□ -1.1
CCDC187-201ENST00000563590 Q5VV11 94 aa8.16□□□□□ -1.1
CCDC187-201ENST00000563590 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
CCDC187-201ENST00000563590 REG3GQ6UW15 175 aa8.15□□□□□ -1.11
CCDC187-201ENST00000563590 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
CCDC187-201ENST00000563590 IGFL1Q6UW32 110 aa8.14□□□□□ -1.11
CCDC187-201ENST00000563590 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
CCDC187-201ENST00000563590 RBM12B-AS1Q9P1G2 102 aa8.12□□□□□ -1.11
CCDC187-201ENST00000563590 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CCDC187-201ENST00000563590 COA5Q86WW8 74 aa8.12□□□□□ -1.11
CCDC187-201ENST00000563590 K7EIL1 84 aa8.11□□□□□ -1.11
CCDC187-201ENST00000563590 COL7A1Q02388 2944 aa8.11□□□□□ -1.11
CCDC187-201ENST00000563590 Q8N9P0 234 aaPredicted RBP8.11□□□□□ -1.11
CCDC187-201ENST00000563590 KTN1-AS1Q86SY8 53 aa8.11□□□□□ -1.11
CCDC187-201ENST00000563590 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
CCDC187-201ENST00000563590 CYP4F30PQ9H0H9 118 aa8.1□□□□□ -1.11
CCDC187-201ENST00000563590 TGP01266 2768 aa8.1□□□□□ -1.11
CCDC187-201ENST00000563590 LCE6AA0A183 80 aa8.09□□□□□ -1.11
CCDC187-201ENST00000563590 TNP2Q05952 138 aa8.08□□□□□ -1.12
CCDC187-201ENST00000563590 CDK2AP2O75956 126 aa8.07□□□□□ -1.12
CCDC187-201ENST00000563590 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
CCDC187-201ENST00000563590 SPRR4Q96PI1 79 aa8.07□□□□□ -1.12
CCDC187-201ENST00000563590 A0A1B0GW54 56 aa8.05□□□□□ -1.12
CCDC187-201ENST00000563590 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
CCDC187-201ENST00000563590 DNAH10OSP0CZ25 163 aa8.04□□□□□ -1.12
CCDC187-201ENST00000563590 LCA10Q71F78 164 aa8.04□□□□□ -1.12
CCDC187-201ENST00000563590 IGHV6-1A0A0B4J1U7 121 aa8.03□□□□□ -1.12
CCDC187-201ENST00000563590 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
CCDC187-201ENST00000563590 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
CCDC187-201ENST00000563590 ATP11AUNQ6ZP68 121 aa8.02□□□□□ -1.13
CCDC187-201ENST00000563590 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
CCDC187-201ENST00000563590 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
CCDC187-201ENST00000563590 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
CCDC187-201ENST00000563590 SPRR1AP35321 89 aa8□□□□□ -1.13
CCDC187-201ENST00000563590 H3BNG1 76 aa8□□□□□ -1.13
CCDC187-201ENST00000563590 CNBPP62633 177 aaKnown RBP7.99□□□□□ -1.13
CCDC187-201ENST00000563590 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
CCDC187-201ENST00000563590 A8MWP4 228 aa7.98□□□□□ -1.13
CCDC187-201ENST00000563590 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
CCDC187-201ENST00000563590 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
CCDC187-201ENST00000563590 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
CCDC187-201ENST00000563590 SPINK7P58062 85 aa7.95□□□□□ -1.14
CCDC187-201ENST00000563590 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
CCDC187-201ENST00000563590 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
CCDC187-201ENST00000563590 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
CCDC187-201ENST00000563590 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
CCDC187-201ENST00000563590 C7orf65Q6ZTY9 151 aa7.94□□□□□ -1.14
CCDC187-201ENST00000563590 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
CCDC187-201ENST00000563590 Q75L30 129 aa7.93□□□□□ -1.14
CCDC187-201ENST00000563590 H3BPC8 53 aa7.92□□□□□ -1.14
CCDC187-201ENST00000563590 MOBPQ13875 183 aa7.92□□□□□ -1.14
CCDC187-201ENST00000563590 KRTAP1-5Q9BYS1 174 aa7.91□□□□□ -1.14
CCDC187-201ENST00000563590 LY6G6CO95867 125 aa7.91□□□□□ -1.14
CCDC187-201ENST00000563590 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.15
CCDC187-201ENST00000563590 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
CCDC187-201ENST00000563590 MMP24-AS1A0A0U1RRL7 71 aa7.85□□□□□ -1.15
CCDC187-201ENST00000563590 A6NN06 94 aa7.85□□□□□ -1.15
CCDC187-201ENST00000563590 C9orf163Q8N9P6 203 aa7.85□□□□□ -1.15
CCDC187-201ENST00000563590 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
CCDC187-201ENST00000563590 HRES1P13985 223 aa7.83□□□□□ -1.16
CCDC187-201ENST00000563590 LINC00472Q9H8W2 130 aa7.83□□□□□ -1.16
CCDC187-201ENST00000563590 LINC00313P59037 77 aa7.83□□□□□ -1.16
CCDC187-201ENST00000563590 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
CCDC187-201ENST00000563590 C8orf17Q9NRJ1 99 aa7.82□□□□□ -1.16
CCDC187-201ENST00000563590 ANK2Q01484 3957 aa7.82□□□□□ -1.16
CCDC187-201ENST00000563590 CIRBP-AS1Q8TBR5 109 aa7.81□□□□□ -1.16
CCDC187-201ENST00000563590 FBN3Q75N90 2809 aa7.81□□□□□ -1.16
CCDC187-201ENST00000563590 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CCDC187-201ENST00000563590 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
CCDC187-201ENST00000563590 KRTAP11-1Q8IUC1 163 aa7.8□□□□□ -1.16
CCDC187-201ENST00000563590 NUPR2A6NF83 97 aa7.79□□□□□ -1.16
CCDC187-201ENST00000563590 A0A1B0GU69 56 aa7.78□□□□□ -1.16
CCDC187-201ENST00000563590 PANO1I0J062 215 aa7.78□□□□□ -1.16
CCDC187-201ENST00000563590 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
CCDC187-201ENST00000563590 MRPL34Q9BQ48 92 aaKnown RBP7.76□□□□□ -1.17
CCDC187-201ENST00000563590 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
CCDC187-201ENST00000563590 C8orf87E5RJ46 101 aa7.75□□□□□ -1.17
CCDC187-201ENST00000563590 SPINK1P00995 79 aa7.75□□□□□ -1.17
CCDC187-201ENST00000563590 NBDYA0A0U1RRE5 68 aa7.73□□□□□ -1.17
CCDC187-201ENST00000563590 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
CCDC187-201ENST00000563590 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
CCDC187-201ENST00000563590 A0A087X002 238 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms