RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
SMPD3-205ENST00000563455 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
SMPD3-205ENST00000563455 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
SMPD3-205ENST00000563455 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
SMPD3-205ENST00000563455 PRLHP81277 87 aa8.58□□□□□ -1.04
SMPD3-205ENST00000563455 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
SMPD3-205ENST00000563455 DEFB105AQ8NG35 78 aa8.58□□□□□ -1.04
SMPD3-205ENST00000563455 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
SMPD3-205ENST00000563455 UBL5Q9BZL1 73 aa8.57□□□□□ -1.04
SMPD3-205ENST00000563455 FUSP35637 526 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMPD3-205ENST00000563455 XGP55808 180 aa8.56□□□□□ -1.04
SMPD3-205ENST00000563455 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
SMPD3-205ENST00000563455 Q6JHZ5 121 aa8.56□□□□□ -1.04
SMPD3-205ENST00000563455 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
SMPD3-205ENST00000563455 ZNF861PO60384 105 aa8.55□□□□□ -1.04
SMPD3-205ENST00000563455 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
SMPD3-205ENST00000563455 RPL37AP61513 92 aaKnown RBP8.55□□□□□ -1.04
SMPD3-205ENST00000563455 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
SMPD3-205ENST00000563455 Q6Q795 121 aa8.54□□□□□ -1.04
SMPD3-205ENST00000563455 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
SMPD3-205ENST00000563455 Q5VSD8 79 aa8.53□□□□□ -1.04
SMPD3-205ENST00000563455 KRTAP11-1Q8IUC1 163 aa8.53□□□□□ -1.04
SMPD3-205ENST00000563455 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
SMPD3-205ENST00000563455 C1orf137Q5JT78 98 aa8.52□□□□□ -1.05
SMPD3-205ENST00000563455 CIRBP-AS1Q8TBR5 109 aa8.52□□□□□ -1.05
SMPD3-205ENST00000563455 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.05
SMPD3-205ENST00000563455 LINC00846Q9NV44 126 aa8.51□□□□□ -1.05
SMPD3-205ENST00000563455 TRBV7-7A0A0K0K1E9 115 aa8.5□□□□□ -1.05
SMPD3-205ENST00000563455 SMIM29Q86T20 159 aa8.5□□□□□ -1.05
SMPD3-205ENST00000563455 IGLV7-43P04211 117 aa8.49□□□□□ -1.05
SMPD3-205ENST00000563455 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
SMPD3-205ENST00000563455 A0A1B0GV72 72 aa8.48□□□□□ -1.05
SMPD3-205ENST00000563455 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
SMPD3-205ENST00000563455 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
SMPD3-205ENST00000563455 MT-ATP8P03928 68 aa8.47□□□□□ -1.05
SMPD3-205ENST00000563455 PLA2G1BP04054 148 aaKnown RBP8.47□□□□□ -1.05
SMPD3-205ENST00000563455 Q8NBF4 154 aa8.47□□□□□ -1.05
SMPD3-205ENST00000563455 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
SMPD3-205ENST00000563455 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.06
SMPD3-205ENST00000563455 CRYGAP11844 174 aa8.45□□□□□ -1.06
SMPD3-205ENST00000563455 CXCL6P80162 114 aa8.44□□□□□ -1.06
SMPD3-205ENST00000563455 NREPQ16612 68 aa8.43□□□□□ -1.06
SMPD3-205ENST00000563455 C3orf22Q8N5N4 141 aa8.43□□□□□ -1.06
SMPD3-205ENST00000563455 J3QL48 77 aa8.42□□□□□ -1.06
SMPD3-205ENST00000563455 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
SMPD3-205ENST00000563455 Q6ZVQ6 151 aa8.41□□□□□ -1.06
SMPD3-205ENST00000563455 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
SMPD3-205ENST00000563455 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
SMPD3-205ENST00000563455 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
SMPD3-205ENST00000563455 HAMPP81172 84 aa8.37□□□□□ -1.07
SMPD3-205ENST00000563455 SSBP3-AS1Q7Z2R9 100 aa8.37□□□□□ -1.07
SMPD3-205ENST00000563455 SRRM2Q9UQ35 2752 aaKnown RBP8.35□□□□□ -1.07
SMPD3-205ENST00000563455 SS18L2Q9UHA2 77 aa8.35□□□□□ -1.07
SMPD3-205ENST00000563455 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
SMPD3-205ENST00000563455 FAT1Q14517 4588 aa8.35□□□□□ -1.07
SMPD3-205ENST00000563455 HERC1Q15751 4861 aa8.34□□□□□ -1.07
SMPD3-205ENST00000563455 CD164Q04900 197 aa8.34□□□□□ -1.07
SMPD3-205ENST00000563455 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
SMPD3-205ENST00000563455 BPY2O14599 106 aa8.33□□□□□ -1.08
SMPD3-205ENST00000563455 C9orf153Q5TBE3 101 aa8.33□□□□□ -1.08
SMPD3-205ENST00000563455 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
SMPD3-205ENST00000563455 PCP4P48539 62 aa8.32□□□□□ -1.08
SMPD3-205ENST00000563455 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
SMPD3-205ENST00000563455 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
SMPD3-205ENST00000563455 J3KT08 172 aa8.3□□□□□ -1.08
SMPD3-205ENST00000563455 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
SMPD3-205ENST00000563455 OXTP01178 125 aa8.29□□□□□ -1.08
SMPD3-205ENST00000563455 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
SMPD3-205ENST00000563455 A0A087WSZ3 146 aa8.28□□□□□ -1.08
SMPD3-205ENST00000563455 ATOX1O00244 68 aa8.28□□□□□ -1.08
SMPD3-205ENST00000563455 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
SMPD3-205ENST00000563455 SMIM20Q8N5G0 67 aa8.27□□□□□ -1.09
SMPD3-205ENST00000563455 MOBPQ13875 183 aa8.26□□□□□ -1.09
SMPD3-205ENST00000563455 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
SMPD3-205ENST00000563455 FAM236AA0A1B0GUQ0 79 aa8.25□□□□□ -1.09
SMPD3-205ENST00000563455 FAM236BA0A1B0GV22 79 aa8.25□□□□□ -1.09
SMPD3-205ENST00000563455 ANAPC13Q9BS18 74 aa8.25□□□□□ -1.09
SMPD3-205ENST00000563455 UBR4Q5T4S7 5183 aa8.23□□□□□ -1.09
SMPD3-205ENST00000563455 Q5XG85 94 aa8.21□□□□□ -1.1
SMPD3-205ENST00000563455 NDUFB1O75438 58 aa8.2□□□□□ -1.1
SMPD3-205ENST00000563455 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
SMPD3-205ENST00000563455 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
SMPD3-205ENST00000563455 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
SMPD3-205ENST00000563455 IGKV4-1P06312 121 aa8.17□□□□□ -1.1
SMPD3-205ENST00000563455 KRTAP10-4P60372 401 aaPredicted RBP8.17□□□□□ -1.1
SMPD3-205ENST00000563455 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
SMPD3-205ENST00000563455 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
SMPD3-205ENST00000563455 LIMD2Q9BT23 127 aa8.17□□□□□ -1.1
SMPD3-205ENST00000563455 ANAPC11Q9NYG5 84 aa8.17□□□□□ -1.1
SMPD3-205ENST00000563455 A0A087WVE0 104 aa8.16□□□□□ -1.1
SMPD3-205ENST00000563455 A0A0G2JQZ4 141 aa8.16□□□□□ -1.1
SMPD3-205ENST00000563455 A8MWP4 228 aa8.16□□□□□ -1.1
SMPD3-205ENST00000563455 DSCR10P59022 87 aa8.16□□□□□ -1.1
SMPD3-205ENST00000563455 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.1
SMPD3-205ENST00000563455 SPINK1P00995 79 aa8.14□□□□□ -1.11
SMPD3-205ENST00000563455 SERP2Q8N6R1 65 aa8.14□□□□□ -1.11
SMPD3-205ENST00000563455 PRR15Q8IV56 129 aa8.13□□□□□ -1.11
SMPD3-205ENST00000563455 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
SMPD3-205ENST00000563455 A0A087X002 238 aa8.12□□□□□ -1.11
SMPD3-205ENST00000563455 UQCRQO14949 82 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms