RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NDUFV3P56181 108 aaKnown RBP6.02□□□□□ -1.45
UBFD1-202ENST00000563366 PRLHP81277 87 aa6.02□□□□□ -1.45
UBFD1-202ENST00000563366 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
UBFD1-202ENST00000563366 VPS25Q9BRG1 176 aa6.02□□□□□ -1.45
UBFD1-202ENST00000563366 HIGD2AQ9BW72 106 aa6.02□□□□□ -1.45
UBFD1-202ENST00000563366 C14orf132Q9NPU4 83 aa6.01□□□□□ -1.45
UBFD1-202ENST00000563366 LOC110117498A0A087WWA1 95 aa6□□□□□ -1.45
UBFD1-202ENST00000563366 ZNF706Q9Y5V0 76 aaPredicted RBP6□□□□□ -1.45
UBFD1-202ENST00000563366 F8WEM9 126 aa5.99□□□□□ -1.45
UBFD1-202ENST00000563366 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
UBFD1-202ENST00000563366 Q8N377 158 aa5.99□□□□□ -1.45
UBFD1-202ENST00000563366 DEFB105AQ8NG35 78 aa5.99□□□□□ -1.45
UBFD1-202ENST00000563366 SACSQ9NZJ4 4579 aa5.99□□□□□ -1.45
UBFD1-202ENST00000563366 CCKP06307 115 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 LINC01547P58512 204 aaPredicted RBP5.98□□□□□ -1.45
UBFD1-202ENST00000563366 GAGE2AQ6NT46 116 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 SCXQ7RTU7 201 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 KRTAP13-1Q8IUC0 172 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 CIRBP-AS1Q8TBR5 109 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 FAT2Q9NYQ8 4349 aa5.98□□□□□ -1.45
UBFD1-202ENST00000563366 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
UBFD1-202ENST00000563366 KRTAP10-1P60331 282 aa5.97□□□□□ -1.45
UBFD1-202ENST00000563366 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
UBFD1-202ENST00000563366 PKD1P98161 4303 aa5.97□□□□□ -1.45
UBFD1-202ENST00000563366 TRBV7-4A0A0J9YYF1 115 aa5.96□□□□□ -1.46
UBFD1-202ENST00000563366 A0A1B0GW54 56 aa5.96□□□□□ -1.46
UBFD1-202ENST00000563366 SPRR1BP22528 89 aa5.96□□□□□ -1.46
UBFD1-202ENST00000563366 Q6ZQT0 140 aa5.96□□□□□ -1.46
UBFD1-202ENST00000563366 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
UBFD1-202ENST00000563366 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
UBFD1-202ENST00000563366 A0A1B0GV72 72 aa5.95□□□□□ -1.46
UBFD1-202ENST00000563366 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
UBFD1-202ENST00000563366 ZNF861PO60384 105 aa5.95□□□□□ -1.46
UBFD1-202ENST00000563366 MPLKIPQ8TAP9 179 aa5.95□□□□□ -1.46
UBFD1-202ENST00000563366 IGLV7-43P04211 117 aa5.93□□□□□ -1.46
UBFD1-202ENST00000563366 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
UBFD1-202ENST00000563366 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
UBFD1-202ENST00000563366 Q6JHZ5 121 aa5.92□□□□□ -1.46
UBFD1-202ENST00000563366 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
UBFD1-202ENST00000563366 RYR2Q92736 4967 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 SMIM29Q86T20 159 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 C3orf22Q8N5N4 141 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 SPRR4Q96PI1 79 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 SIGMAR1Q99720 223 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 UBL5Q9BZL1 73 aa5.91□□□□□ -1.46
UBFD1-202ENST00000563366 RPL37AP61513 92 aaKnown RBP5.9□□□□□ -1.46
UBFD1-202ENST00000563366 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
UBFD1-202ENST00000563366 DNAH8Q96JB1 4490 aa5.9□□□□□ -1.47
UBFD1-202ENST00000563366 ATP5EP2Q5VTU8 51 aa5.89□□□□□ -1.47
UBFD1-202ENST00000563366 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
UBFD1-202ENST00000563366 XGP55808 180 aa5.88□□□□□ -1.47
UBFD1-202ENST00000563366 Q8NBF4 154 aa5.88□□□□□ -1.47
UBFD1-202ENST00000563366 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
UBFD1-202ENST00000563366 KMT2CQ8NEZ4 4911 aaKnown RBP5.86□□□□□ -1.47
UBFD1-202ENST00000563366 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
UBFD1-202ENST00000563366 CRYGAP11844 174 aa5.84□□□□□ -1.47
UBFD1-202ENST00000563366 HAMPP81172 84 aa5.84□□□□□ -1.47
UBFD1-202ENST00000563366 C9orf153Q5TBE3 101 aa5.84□□□□□ -1.47
UBFD1-202ENST00000563366 Q6Q795 121 aa5.84□□□□□ -1.47
UBFD1-202ENST00000563366 PKHD1P08F94 4074 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 TRBV7-7A0A0K0K1E9 115 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 A0A1W2PNM2 257 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 MT-ATP8P03928 68 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 NREPQ16612 68 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 FAM229BQ4G0N7 80 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 Q6ZVQ6 151 aa5.83□□□□□ -1.48
UBFD1-202ENST00000563366 IGLV9-49A0A0B4J1Y8 123 aa5.82□□□□□ -1.48
UBFD1-202ENST00000563366 SPINK6Q6UWN8 80 aa5.82□□□□□ -1.48
UBFD1-202ENST00000563366 CXCL6P80162 114 aa5.81□□□□□ -1.48
UBFD1-202ENST00000563366 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
UBFD1-202ENST00000563366 MOBPQ13875 183 aa5.8□□□□□ -1.48
UBFD1-202ENST00000563366 CDK2AP2O75956 126 aa5.79□□□□□ -1.48
UBFD1-202ENST00000563366 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
UBFD1-202ENST00000563366 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
UBFD1-202ENST00000563366 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
UBFD1-202ENST00000563366 A0A087WSZ3 146 aa5.77□□□□□ -1.49
UBFD1-202ENST00000563366 CD164Q04900 197 aa5.77□□□□□ -1.49
UBFD1-202ENST00000563366 KRTAP4-11Q9BYQ6 195 aa5.77□□□□□ -1.49
UBFD1-202ENST00000563366 IGKV3D-7A0A0C4DH55 119 aa5.76□□□□□ -1.49
UBFD1-202ENST00000563366 BPY2O14599 106 aa5.76□□□□□ -1.49
UBFD1-202ENST00000563366 DYNC1H1Q14204 4646 aaKnown RBP5.75□□□□□ -1.49
UBFD1-202ENST00000563366 SMR3BP02814 79 aaPredicted RBP5.75□□□□□ -1.49
UBFD1-202ENST00000563366 ANAPC11Q9NYG5 84 aa5.75□□□□□ -1.49
UBFD1-202ENST00000563366 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
UBFD1-202ENST00000563366 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
UBFD1-202ENST00000563366 J3KT08 172 aa5.73□□□□□ -1.49
UBFD1-202ENST00000563366 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
UBFD1-202ENST00000563366 RYR3Q15413 4870 aa5.72□□□□□ -1.49
UBFD1-202ENST00000563366 VPS13BQ7Z7G8 4022 aa5.72□□□□□ -1.49
UBFD1-202ENST00000563366 APOBP04114 4563 aaKnown RBP5.71□□□□□ -1.5
UBFD1-202ENST00000563366 A0A087X002 238 aa5.71□□□□□ -1.5
UBFD1-202ENST00000563366 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
UBFD1-202ENST00000563366 FAM236AA0A1B0GUQ0 79 aa5.7□□□□□ -1.5
UBFD1-202ENST00000563366 FAM236BA0A1B0GV22 79 aa5.7□□□□□ -1.5
UBFD1-202ENST00000563366 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
UBFD1-202ENST00000563366 TYMSOSQ8TAI1 123 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms