RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	OR13C6P	Q8NH95	151 aa		4.14	□□□□□ -1.75
CKLF-208	ENST00000563092		A8MUU9	505 aa		4.13	□□□□□ -1.75
CKLF-208	ENST00000563092	TIMM17B	O60830	172 aa		4.13	□□□□□ -1.75
CKLF-208	ENST00000563092	DPM2	O94777	84 aa		4.13	□□□□□ -1.75
CKLF-208	ENST00000563092	HERVK_113	P61574	105 aa		4.13	□□□□□ -1.75
CKLF-208	ENST00000563092	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.13	□□□□□ -1.75
CKLF-208	ENST00000563092	MPLKIP	Q8TAP9	179 aa		4.13	□□□□□ -1.75
CKLF-208	ENST00000563092	TRBV20-1	A0A075B6N2	111 aa		4.12	□□□□□ -1.75
CKLF-208	ENST00000563092		A0A1B0GWB2	263 aa		4.12	□□□□□ -1.75
CKLF-208	ENST00000563092		E9PLD3	99 aa		4.12	□□□□□ -1.75
CKLF-208	ENST00000563092	HSBP1	O75506	76 aa		4.12	□□□□□ -1.75
CKLF-208	ENST00000563092	PCP2	Q8IVA1	136 aa		4.12	□□□□□ -1.75
CKLF-208	ENST00000563092	YPEL4	Q96NS1	127 aa		4.12	□□□□□ -1.75
CKLF-208	ENST00000563092	TRBV7-7	A0A0K0K1E9	115 aa		4.11	□□□□□ -1.75
CKLF-208	ENST00000563092		H0Y8G0	127 aa		4.11	□□□□□ -1.75
CKLF-208	ENST00000563092	IGKC	P01834	107 aa		4.11	□□□□□ -1.75
CKLF-208	ENST00000563092	LINC00518	Q8N0U6	118 aa		4.11	□□□□□ -1.75
CKLF-208	ENST00000563092	TRIAP1	O43715	76 aa		4.1	□□□□□ -1.75
CKLF-208	ENST00000563092	LEPROTL1	O95214	131 aa		4.1	□□□□□ -1.75
CKLF-208	ENST00000563092	PMCHL2	Q9BQD1	86 aa		4.1	□□□□□ -1.75
CKLF-208	ENST00000563092	IGFL1	Q6UW32	110 aa		4.09	□□□□□ -1.75
CKLF-208	ENST00000563092		Q96NJ1	140 aa		4.09	□□□□□ -1.75
CKLF-208	ENST00000563092		A4D1N5	150 aa		4.08	□□□□□ -1.76
CKLF-208	ENST00000563092	KRTAP16-1	A8MUX0	517 aa		4.08	□□□□□ -1.76
CKLF-208	ENST00000563092	LCE1A	Q5T7P2	110 aa		4.08	□□□□□ -1.76
CKLF-208	ENST00000563092		Q6JHZ5	121 aa		4.08	□□□□□ -1.76
CKLF-208	ENST00000563092	CLEC2B	Q92478	149 aa		4.08	□□□□□ -1.76
CKLF-208	ENST00000563092	NEB	P20929	6669 aa		4.08	□□□□□ -1.76
CKLF-208	ENST00000563092	HRES1	P13985	223 aa		4.07	□□□□□ -1.76
CKLF-208	ENST00000563092	SERF1A	O75920	110 aa		4.06	□□□□□ -1.76
CKLF-208	ENST00000563092	NHP2	Q9NX24	153 aa	Known RBP	4.06	□□□□□ -1.76
CKLF-208	ENST00000563092	HSPB8	Q9UJY1	196 aa		4.06	□□□□□ -1.76
CKLF-208	ENST00000563092		F8WEM9	126 aa		4.05	□□□□□ -1.76
CKLF-208	ENST00000563092	LST1	O00453	97 aa		4.04	□□□□□ -1.76
CKLF-208	ENST00000563092	OCIAD2	Q56VL3	154 aa		4.04	□□□□□ -1.76
CKLF-208	ENST00000563092	TRAV13-2	A0A0B4J235	113 aa		4.03	□□□□□ -1.76
CKLF-208	ENST00000563092	FAM236D	A0A1B0GTK5	79 aa		4.03	□□□□□ -1.76
CKLF-208	ENST00000563092	ZNF815P	A8K554	130 aa		4.03	□□□□□ -1.76
CKLF-208	ENST00000563092	FAM236C	P0DP71	79 aa		4.03	□□□□□ -1.76
CKLF-208	ENST00000563092	FABP4	P15090	132 aa		4.03	□□□□□ -1.76
CKLF-208	ENST00000563092	NOTCH2NL	Q7Z3S9	236 aa		4.03	□□□□□ -1.76
CKLF-208	ENST00000563092	KRTAP10-7	P60409	375 aa	Predicted RBP	4.02	□□□□□ -1.77
CKLF-208	ENST00000563092	LINC00575	Q6W349	94 aa		4.02	□□□□□ -1.77
CKLF-208	ENST00000563092	SMIM11B	Q8TCY0	68 aa		4.02	□□□□□ -1.77
CKLF-208	ENST00000563092	TTTY13	Q9BZ97	58 aa		4.02	□□□□□ -1.77
CKLF-208	ENST00000563092	RBM12B-AS1	Q9P1G2	102 aa		4.02	□□□□□ -1.77
CKLF-208	ENST00000563092		A6NDN8	102 aa		4.01	□□□□□ -1.77
CKLF-208	ENST00000563092	SNAPIN	O95295	136 aa		4.01	□□□□□ -1.77
CKLF-208	ENST00000563092	TRGC2	P03986	189 aa		4.01	□□□□□ -1.77
CKLF-208	ENST00000563092	IFITM1	P13164	125 aa		4.01	□□□□□ -1.77
CKLF-208	ENST00000563092	SYS1-DBNDD2	H3BUS1	97 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092	APOC3	P02656	99 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092	KRTAP20-1	Q3LI63	56 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092	LINC01545	Q5VT33	79 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092	KRTAP5-11	Q6L8G4	156 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092		Q6ZQY7	126 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092	SVBP	Q8N300	66 aa		4	□□□□□ -1.77
CKLF-208	ENST00000563092	MUC12	Q9UKN1	5478 aa		3.99	□□□□□ -1.77
CKLF-208	ENST00000563092		Q6ZVH6	145 aa		3.99	□□□□□ -1.77
CKLF-208	ENST00000563092	COPS9	Q8WXC6	57 aa		3.99	□□□□□ -1.77
CKLF-208	ENST00000563092	DSCR10	P59022	87 aa		3.98	□□□□□ -1.77
CKLF-208	ENST00000563092	SLC7A5P1	Q8MH63	180 aa		3.98	□□□□□ -1.77
CKLF-208	ENST00000563092	PPDPFL	Q8WWR9	84 aa		3.98	□□□□□ -1.77
CKLF-208	ENST00000563092	SS18L2	Q9UHA2	77 aa		3.98	□□□□□ -1.77
CKLF-208	ENST00000563092	hADV29S1	A0JD25	119 aa		3.97	□□□□□ -1.77
CKLF-208	ENST00000563092	MUSTN1	Q8IVN3	82 aa		3.97	□□□□□ -1.77
CKLF-208	ENST00000563092		Q8N9P0	234 aa	Predicted RBP	3.97	□□□□□ -1.77
CKLF-208	ENST00000563092		A8MWP4	228 aa		3.96	□□□□□ -1.78
CKLF-208	ENST00000563092	SCGB1D1	O95968	90 aa		3.96	□□□□□ -1.78
CKLF-208	ENST00000563092	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.96	□□□□□ -1.78
CKLF-208	ENST00000563092		H3BUT2	72 aa		3.95	□□□□□ -1.78
CKLF-208	ENST00000563092	PCP4	P48539	62 aa		3.95	□□□□□ -1.78
CKLF-208	ENST00000563092	VAMP3	Q15836	100 aa		3.95	□□□□□ -1.78
CKLF-208	ENST00000563092	SCGB1D4	Q6XE38	83 aa		3.95	□□□□□ -1.78
CKLF-208	ENST00000563092	TEN1	Q86WV5	123 aa		3.95	□□□□□ -1.78
CKLF-208	ENST00000563092	NDUFA5	Q16718	116 aa		3.94	□□□□□ -1.78
CKLF-208	ENST00000563092	PET117	Q6UWS5	81 aa		3.94	□□□□□ -1.78
CKLF-208	ENST00000563092	LINC00313	P59037	77 aa		3.93	□□□□□ -1.78
CKLF-208	ENST00000563092	MTURN	Q8N3F0	131 aa		3.93	□□□□□ -1.78
CKLF-208	ENST00000563092		A0A087WSZ3	146 aa		3.92	□□□□□ -1.78
CKLF-208	ENST00000563092	COLCA2	A8K830	154 aa		3.92	□□□□□ -1.78
CKLF-208	ENST00000563092	KRTAP5-9	P26371	169 aa		3.92	□□□□□ -1.78
CKLF-208	ENST00000563092	SNHG12	Q9BXW3	62 aa		3.92	□□□□□ -1.78
CKLF-208	ENST00000563092	C3orf79	P0CE67	100 aa		3.89	□□□□□ -1.79
CKLF-208	ENST00000563092	SIGMAR1	Q99720	223 aa		3.88	□□□□□ -1.79
CKLF-208	ENST00000563092	KRTAP2-2	Q9BYT5	123 aa		3.88	□□□□□ -1.79
CKLF-208	ENST00000563092		A0A1W2PNM2	257 aa		3.87	□□□□□ -1.79
CKLF-208	ENST00000563092	NDUFV3	P56181	108 aa	Known RBP	3.87	□□□□□ -1.79
CKLF-208	ENST00000563092	SPINK7	P58062	85 aa		3.87	□□□□□ -1.79
CKLF-208	ENST00000563092	BVES-AS1	Q5T3Y7	98 aa		3.87	□□□□□ -1.79
CKLF-208	ENST00000563092	KMT2D	O14686	5537 aa		3.87	□□□□□ -1.79
CKLF-208	ENST00000563092	MDN1	Q9NU22	5596 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST1H2BK	O60814	126 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	IGKV4-1	P06312	121 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST1H2BJ	P06899	126 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST1H2BO	P23527	126 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST1H2BB	P33778	126 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST1H2BD	P58876	126 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST1H2BC	P62807	126 aa		3.86	□□□□□ -1.79
CKLF-208	ENST00000563092	HIST2H2BE	Q16778	126 aa		3.86	□□□□□ -1.79

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