RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 LOC105371267A0A1B0GV96 52 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 ZNF861PO60384 105 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 OXTP01178 125 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 IFITM1P13164 125 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 CXCL6P80162 114 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 SCGB1D4Q6XE38 83 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 LINC00518Q8N0U6 118 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 LINC00337Q8N6G1 96 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 C14orf144Q96I85 54 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 LINC01600Q96MT4 127 aa2.66□□□□□ -1.98
SMG1-206ENST00000562668 A4D1N5 150 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 HSBP1L1C9JCN9 74 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 DDTP30046 118 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 PRLHP81277 87 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 SMCR5Q8TEV8 140 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 VAMP8Q9BV40 100 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 HIGD1BQ9P298 99 aa2.65□□□□□ -1.99
SMG1-206ENST00000562668 DIRC1Q969H9 104 aa2.64□□□□□ -1.99
SMG1-206ENST00000562668 Q9BRP9 147 aa2.64□□□□□ -1.99
SMG1-206ENST00000562668 MIEN1Q9BRT3 115 aa2.64□□□□□ -1.99
SMG1-206ENST00000562668 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
SMG1-206ENST00000562668 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
SMG1-206ENST00000562668 ZNF73O43830 326 aaPredicted RBP2.63□□□□□ -1.99
SMG1-206ENST00000562668 ERC2-IT1O76042 136 aa2.63□□□□□ -1.99
SMG1-206ENST00000562668 RPL28P46779 137 aaKnown RBP2.63□□□□□ -1.99
SMG1-206ENST00000562668 KRTAP13-2Q52LG2 175 aa2.63□□□□□ -1.99
SMG1-206ENST00000562668 SLC25A34Q6PIV7 304 aa2.63□□□□□ -1.99
SMG1-206ENST00000562668 Q6ZRX8 168 aa2.63□□□□□ -1.99
SMG1-206ENST00000562668 FAM19A1Q7Z5A9 133 aa2.63□□□□□ -1.99
SMG1-206ENST00000562668 TAL2Q16559 108 aa2.62□□□□□ -1.99
SMG1-206ENST00000562668 S100A7L2Q5SY68 101 aa2.62□□□□□ -1.99
SMG1-206ENST00000562668 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
SMG1-206ENST00000562668 LPAP08519 4548 aa2.62□□□□□ -1.99
SMG1-206ENST00000562668 ETDCA0A1B0GVM5 59 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 SMIM6P0DI80 62 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 UBE2AP49459 152 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 FXYD2P54710 66 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 ELOF1P60002 83 aaKnown RBP2.61□□□□□ -1.99
SMG1-206ENST00000562668 C6orf99Q4VX62 202 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 LINC00483Q53H64 154 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 CEND1Q8N111 149 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 SMIM11BQ8TCY0 68 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 COPS9Q8WXC6 57 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 HIST1H4GQ99525 98 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
SMG1-206ENST00000562668 DMBT1Q9UGM3 2413 aaPredicted RBP2.61□□□□□ -1.99
SMG1-206ENST00000562668 TRAV13-2A0A0B4J235 113 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 A0A0B4J2C4 111 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 TRBV7-6A0A0J9YX20 115 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 A0A1B0GWB2 263 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 A6NDN8 102 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 SPRR1BP22528 89 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 FAM229BQ4G0N7 80 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 ST20-AS1Q8NBB2 130 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 OR13C6PQ8NH95 151 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 C12orf57Q99622 126 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 HIGD2AQ9BW72 106 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 PRO1933Q9H354 126 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 UQCR10Q9UDW1 63 aa2.6□□□□□ -1.99
SMG1-206ENST00000562668 LRP2P98164 4655 aa2.59□□□□□ -1.99
SMG1-206ENST00000562668 COX7BP24311 80 aa2.59□□□□□ -1.99
SMG1-206ENST00000562668 HSD52Q0P140 79 aa2.59□□□□□ -1.99
SMG1-206ENST00000562668 C3orf22Q8N5N4 141 aa2.59□□□□□ -1.99
SMG1-206ENST00000562668 RNF213Q63HN8 5207 aa2.59□□□□□ -2
SMG1-206ENST00000562668 IGLV8-61A0A075B6I0 122 aa2.58□□□□□ -2
SMG1-206ENST00000562668 IGLV5-48A0A075B6I7 105 aa2.58□□□□□ -2
SMG1-206ENST00000562668 CRYGAP11844 174 aa2.58□□□□□ -2
SMG1-206ENST00000562668 RPL13AP40429 203 aaKnown RBP2.58□□□□□ -2
SMG1-206ENST00000562668 S100A12P80511 92 aa2.58□□□□□ -2
SMG1-206ENST00000562668 BVES-AS1Q5T3Y7 98 aa2.58□□□□□ -2
SMG1-206ENST00000562668 CBY1Q9Y3M2 126 aa2.58□□□□□ -2
SMG1-206ENST00000562668 K7ERJ3 54 aa2.57□□□□□ -2
SMG1-206ENST00000562668 LINC00575Q6W349 94 aa2.57□□□□□ -2
SMG1-206ENST00000562668 PRO1854Q9UHT4 67 aa2.57□□□□□ -2
SMG1-206ENST00000562668 ZNF706Q9Y5V0 76 aaPredicted RBP2.57□□□□□ -2
SMG1-206ENST00000562668 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
SMG1-206ENST00000562668 CTAG1AP78358 180 aa2.56□□□□□ -2
SMG1-206ENST00000562668 RAB37Q96AX2 223 aa2.56□□□□□ -2
SMG1-206ENST00000562668 NHP2Q9NX24 153 aaKnown RBP2.56□□□□□ -2
SMG1-206ENST00000562668 TSPAN13O95857 204 aa2.55□□□□□ -2
SMG1-206ENST00000562668 TEX49A0A1B0GTD5 131 aa2.54□□□□□ -2
SMG1-206ENST00000562668 hADV29S1A0JD25 119 aa2.54□□□□□ -2
SMG1-206ENST00000562668 H7C2G1 150 aa2.54□□□□□ -2
SMG1-206ENST00000562668 Q6ZQY7 126 aa2.54□□□□□ -2
SMG1-206ENST00000562668 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
SMG1-206ENST00000562668 Q8N9L7 120 aa2.54□□□□□ -2
SMG1-206ENST00000562668 LINC00304Q8N9R0 145 aa2.54□□□□□ -2
SMG1-206ENST00000562668 A0A1B0GX51 115 aa2.53□□□□□ -2
SMG1-206ENST00000562668 TSTD3H0UI37 97 aa2.53□□□□□ -2
SMG1-206ENST00000562668 H0YGX0 51 aa2.53□□□□□ -2
SMG1-206ENST00000562668 KRTAP10-10P60014 251 aa2.53□□□□□ -2
SMG1-206ENST00000562668 MOBPQ13875 183 aa2.53□□□□□ -2
SMG1-206ENST00000562668 VAMP3Q15836 100 aa2.53□□□□□ -2
SMG1-206ENST00000562668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.53□□□□□ -2
SMG1-206ENST00000562668 CLEC2BQ92478 149 aa2.53□□□□□ -2
SMG1-206ENST00000562668 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
SMG1-206ENST00000562668 M0R143 59 aa2.52□□□□□ -2.01
SMG1-206ENST00000562668 PRR4Q16378 134 aa2.52□□□□□ -2.01
SMG1-206ENST00000562668 DEFB105AQ8NG35 78 aa2.52□□□□□ -2.01
SMG1-206ENST00000562668 LST1O00453 97 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms