RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 GVQW2A0A096LPI5 108 aaPredicted RBP2.02□□□□□ -2.09
SPG11-225ENST00000561391 IGKV3OR2-268A0A0C4DH90 116 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 C9JAW5 83 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 LST1O00453 97 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 SCGB1A1P11684 91 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 CXCL6P80162 114 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 ETDBQ3ZM63 59 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 C2orf82Q6UX34 121 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 MTURNQ8N3F0 131 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 MIR7-3HGQ8N6C7 128 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 RMI2Q96E14 147 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 TMEM126AQ9H061 195 aa2.02□□□□□ -2.09
SPG11-225ENST00000561391 FAM240AA0A1B0GVK7 77 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 FAM168BA1KXE4 195 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 PSCAO43653 123 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 DNAL4O96015 105 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 PFN2P35080 140 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 KRTAP10-8P60410 259 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 LINC01556Q5JQF7 62 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 Q8N814 137 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 UPK3BQ9BT76 320 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 KLK12Q9UKR0 248 aa2.01□□□□□ -2.09
SPG11-225ENST00000561391 TRBV7-6A0A0J9YX20 115 aa2□□□□□ -2.09
SPG11-225ENST00000561391 LRCOL1A6NCL2 159 aa2□□□□□ -2.09
SPG11-225ENST00000561391 BAALC-AS2P0C853 105 aa2□□□□□ -2.09
SPG11-225ENST00000561391 NPC2P61916 151 aa2□□□□□ -2.09
SPG11-225ENST00000561391 SPAG11BQ08648 103 aa2□□□□□ -2.09
SPG11-225ENST00000561391 KIAA0087Q14695 138 aa2□□□□□ -2.09
SPG11-225ENST00000561391 S100A7L2Q5SY68 101 aa2□□□□□ -2.09
SPG11-225ENST00000561391 SOSTDC1Q6X4U4 206 aa2□□□□□ -2.09
SPG11-225ENST00000561391 DAND5Q8N907 189 aa2□□□□□ -2.09
SPG11-225ENST00000561391 OR13C6PQ8NH95 151 aa2□□□□□ -2.09
SPG11-225ENST00000561391 UBE2WQ96B02 151 aa2□□□□□ -2.09
SPG11-225ENST00000561391 PKIGQ9Y2B9 76 aa2□□□□□ -2.09
SPG11-225ENST00000561391 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
SPG11-225ENST00000561391 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.99□□□□□ -2.09
SPG11-225ENST00000561391 IGKV2-28A0A075B6P5 120 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 JMJD7-PLA2G4BH0Y9G9 81 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 TMEM256-PLSCR3K7ERE1 68 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 IGKV2D-28P01615 120 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 PDE6GP18545 87 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 PRR4Q16378 134 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 ENHOQ6UWT2 76 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 SMIM11BQ8TCY0 68 aa1.99□□□□□ -2.09
SPG11-225ENST00000561391 SSPOA2VEC9 5147 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
SPG11-225ENST00000561391 NDUFC2-KCTD14E9PQ53 114 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 SYCNQ0VAF6 134 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 CLPSL2Q6UWE3 100 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 LINC00337Q8N6G1 96 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 CLEC2BQ92478 149 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 CAMK2N2Q96S95 79 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 IMUPQ9GZP8 106 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 ORMDL1Q9P0S3 153 aa1.98□□□□□ -2.09
SPG11-225ENST00000561391 IGLV8-61A0A075B6I0 122 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 IGKV2D-24A0A075B6R9 120 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 TEX49A0A1B0GTD5 131 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 M0R378 163 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 LECT2O14960 151 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 IGLV6-57P01721 117 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 TLX1NBP0CAT3 122 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 KRTAP26-1Q6PEX3 210 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 Q6Q795 121 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 LINC00643Q86TS7 51 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 WFDC10BQ8IUB3 73 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 LINC00167Q96N53 147 aa1.97□□□□□ -2.09
SPG11-225ENST00000561391 TRAV23DV6A0A075B6W5 121 aa1.96□□□□□ -2.1
SPG11-225ENST00000561391 hADV29S1A0JD25 119 aa1.96□□□□□ -2.1
SPG11-225ENST00000561391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.96□□□□□ -2.1
SPG11-225ENST00000561391 LINC00575Q6W349 94 aa1.96□□□□□ -2.1
SPG11-225ENST00000561391 DIRC1Q969H9 104 aa1.96□□□□□ -2.1
SPG11-225ENST00000561391 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
SPG11-225ENST00000561391 C6orf48Q9UBA6 75 aa1.96□□□□□ -2.1
SPG11-225ENST00000561391 LOC107984640A0A0U1RRK4 108 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 A0A1B0GV72 72 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 A0A1B0GW54 56 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 ZNF73O43830 326 aaPredicted RBP1.95□□□□□ -2.1
SPG11-225ENST00000561391 CCKP06307 115 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 COX7BP24311 80 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 RBM3P98179 157 aaKnown RBP1.95□□□□□ -2.1
SPG11-225ENST00000561391 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 C6orf99Q4VX62 202 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 C9orf116Q5BN46 136 aaPredicted RBP1.95□□□□□ -2.1
SPG11-225ENST00000561391 C9orf129Q5T035 196 aaKnown RBP1.95□□□□□ -2.1
SPG11-225ENST00000561391 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 NKAPP1Q8N9T2 125 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 DSCR8Q96T75 97 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 KCNQ1DNQ9H478 68 aa1.95□□□□□ -2.1
SPG11-225ENST00000561391 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
SPG11-225ENST00000561391 LOC110117498A0A087WWA1 95 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 TRBV7-7A0A0K0K1E9 115 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 TRBV10-3A0A0K0K1G6 114 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 NCR3O14931 201 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 ELOF1P60002 83 aaKnown RBP1.94□□□□□ -2.1
SPG11-225ENST00000561391 CNBPP62633 177 aaKnown RBP1.94□□□□□ -2.1
SPG11-225ENST00000561391 PRR3P79522 188 aaKnown RBP1.94□□□□□ -2.1
SPG11-225ENST00000561391 RPL18AQ02543 176 aaKnown RBP1.94□□□□□ -2.1
SPG11-225ENST00000561391 SDIM1Q6ZPB5 146 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms