RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ORMDL3Q8N138 153 aa1.53□□□□□ -2.16
HERC1-211ENST00000560983 MIR7-3HGQ8N6C7 128 aa1.53□□□□□ -2.16
HERC1-211ENST00000560983 Q8N8P6 123 aa1.53□□□□□ -2.16
HERC1-211ENST00000560983 TOMM6Q96B49 74 aa1.53□□□□□ -2.16
HERC1-211ENST00000560983 PRELID3AQ96N28 172 aa1.53□□□□□ -2.16
HERC1-211ENST00000560983 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
HERC1-211ENST00000560983 TAL2Q16559 108 aa1.52□□□□□ -2.17
HERC1-211ENST00000560983 ERASQ7Z444 233 aa1.52□□□□□ -2.17
HERC1-211ENST00000560983 OSTCQ9NRP0 149 aa1.52□□□□□ -2.17
HERC1-211ENST00000560983 NAT8BQ9UHF3 227 aa1.52□□□□□ -2.17
HERC1-211ENST00000560983 TRBV7-7A0A0K0K1E9 115 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 A0A1B0GW15 77 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 A0A1B0GXF2 115 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 SMIM27A0A1W2PRY6 76 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 F8W036 122 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 IGLC3P0DOY3 106 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 ZNF22P17026 224 aaPredicted RBP1.51□□□□□ -2.17
HERC1-211ENST00000560983 SPINK7P58062 85 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 ZNF345Q14585 488 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 SFTA2Q6UW10 78 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
HERC1-211ENST00000560983 IGLV5-48A0A075B6I7 105 aa1.5□□□□□ -2.17
HERC1-211ENST00000560983 K7EMI3 77 aa1.5□□□□□ -2.17
HERC1-211ENST00000560983 LINC00299Q6ZSB3 139 aa1.5□□□□□ -2.17
HERC1-211ENST00000560983 ZCCHC13Q8WW36 166 aaKnown RBP1.5□□□□□ -2.17
HERC1-211ENST00000560983 MAP1LC3AQ9H492 121 aa1.5□□□□□ -2.17
HERC1-211ENST00000560983 BATF3Q9NR55 127 aa1.5□□□□□ -2.17
HERC1-211ENST00000560983 LST1O00453 97 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 ARPC5O15511 151 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 ATP6V1G1O75348 118 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 SERF1AO75920 110 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 H1FX-AS1Q4G0G2 97 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 S100A7L2Q5SY68 101 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 MRPL54Q6P161 138 aaKnown RBP1.49□□□□□ -2.17
HERC1-211ENST00000560983 FA2HQ7L5A8 372 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 SPANXB1Q9NS25 103 aaPredicted RBP1.49□□□□□ -2.17
HERC1-211ENST00000560983 LAMTOR2Q9Y2Q5 125 aa1.49□□□□□ -2.17
HERC1-211ENST00000560983 A0A1B0GWB2 263 aa1.48□□□□□ -2.17
HERC1-211ENST00000560983 TMEM250H0YL14 139 aa1.48□□□□□ -2.17
HERC1-211ENST00000560983 G0S2P27469 103 aa1.48□□□□□ -2.17
HERC1-211ENST00000560983 HINT1P49773 126 aaPredicted RBP1.48□□□□□ -2.17
HERC1-211ENST00000560983 RBM3P98179 157 aaKnown RBP1.48□□□□□ -2.17
HERC1-211ENST00000560983 SOSTDC1Q6X4U4 206 aa1.48□□□□□ -2.17
HERC1-211ENST00000560983 WFDC13Q8IUB5 93 aa1.48□□□□□ -2.17
HERC1-211ENST00000560983 FAM236AA0A1B0GUQ0 79 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 FAM236BA0A1B0GV22 79 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 C11orf86A6NJI1 115 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 TEX46H3BTG2 121 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 NDUFC2O95298 119 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 S100A8P05109 93 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 ELOF1P60002 83 aaKnown RBP1.47□□□□□ -2.17
HERC1-211ENST00000560983 MEIG1Q5JSS6 88 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 NXT2Q9NPJ8 142 aaKnown RBP1.47□□□□□ -2.17
HERC1-211ENST00000560983 PRO2289Q9P1D8 64 aa1.47□□□□□ -2.17
HERC1-211ENST00000560983 LINC01546A6NGU7 62 aa1.46□□□□□ -2.18
HERC1-211ENST00000560983 LINC00313P59037 77 aa1.46□□□□□ -2.18
HERC1-211ENST00000560983 SMIM7Q9BQ49 75 aa1.46□□□□□ -2.18
HERC1-211ENST00000560983 TMEM223A0PJW6 202 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 COLCA2A8K830 154 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 SMLR1H3BR10 107 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 COX7BP24311 80 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 CEBPGP53567 150 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 HERV-K104P63124 156 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 TMEM170BQ5T4T1 132 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 CLEC2BQ92478 149 aa1.45□□□□□ -2.18
HERC1-211ENST00000560983 LINC01549A6NIU2 74 aa1.44□□□□□ -2.18
HERC1-211ENST00000560983 KLKP1Q107X0 134 aa1.44□□□□□ -2.18
HERC1-211ENST00000560983 Q6JHZ5 121 aa1.44□□□□□ -2.18
HERC1-211ENST00000560983 ATP5L2Q7Z4Y8 100 aa1.44□□□□□ -2.18
HERC1-211ENST00000560983 MAP1LC3CQ9BXW4 147 aa1.44□□□□□ -2.18
HERC1-211ENST00000560983 KANTRA0A1W2PQU2 76 aa1.43□□□□□ -2.18
HERC1-211ENST00000560983 RHEBQ15382 184 aa1.43□□□□□ -2.18
HERC1-211ENST00000560983 OCIAD2Q56VL3 154 aa1.43□□□□□ -2.18
HERC1-211ENST00000560983 CBY1Q9Y3M2 126 aa1.43□□□□□ -2.18
HERC1-211ENST00000560983 A0A096LNJ9 63 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 TRBV7-6A0A0J9YX20 115 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 MYMXA0A1B0GTQ4 84 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 ZNF815PA8K554 130 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 HBDP02042 147 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 SRP19P09132 144 aaKnown RBP1.42□□□□□ -2.18
HERC1-211ENST00000560983 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 C5orf47Q569G3 176 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 KRTAP19-3Q7Z4W3 81 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 BAGE3Q86Y29 109 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 S100ZQ8WXG8 99 aa1.42□□□□□ -2.18
HERC1-211ENST00000560983 A0A0J9YXY3 114 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 TSPEAR-AS2P59090 65 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 NPC2P61916 151 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 ADIRFQ15847 76 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 LINC00518Q8N0U6 118 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 OR13C6PQ8NH95 151 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 MIEN1Q9BRT3 115 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 CYSTM1Q9H1C7 97 aa1.41□□□□□ -2.18
HERC1-211ENST00000560983 TRAV13-2A0A0B4J235 113 aa1.4□□□□□ -2.19
HERC1-211ENST00000560983 C9JQL5 133 aa1.4□□□□□ -2.19
HERC1-211ENST00000560983 F8WEM9 126 aa1.4□□□□□ -2.19
HERC1-211ENST00000560983 COMMD7Q86VX2 200 aa1.4□□□□□ -2.19
HERC1-211ENST00000560983 SS18L2Q9UHA2 77 aa1.4□□□□□ -2.19
HERC1-211ENST00000560983 SPANXDQ9BXN6 97 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms