RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 DEFB131BA0A096LNP1 70 aa10.41□□□□□ -0.74
TPM1-228ENST00000560975 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
TPM1-228ENST00000560975 CASC2Q6XLA1 102 aa10.4□□□□□ -0.74
TPM1-228ENST00000560975 HELZ2Q9BYK8 2649 aaKnown RBP10.4□□□□□ -0.75
TPM1-228ENST00000560975 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
TPM1-228ENST00000560975 SRRM2Q9UQ35 2752 aaKnown RBP10.39□□□□□ -0.75
TPM1-228ENST00000560975 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
TPM1-228ENST00000560975 UBE2AP49459 152 aa10.38□□□□□ -0.75
TPM1-228ENST00000560975 OTOGQ6ZRI0 2925 aa10.37□□□□□ -0.75
TPM1-228ENST00000560975 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
TPM1-228ENST00000560975 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
TPM1-228ENST00000560975 CNBPP62633 177 aaKnown RBP10.36□□□□□ -0.75
TPM1-228ENST00000560975 DNAH10OSP0CZ25 163 aa10.35□□□□□ -0.75
TPM1-228ENST00000560975 SPANXA2-OT1Q8N9U9 137 aa10.35□□□□□ -0.75
TPM1-228ENST00000560975 IGKV2-24A0A0C4DH68 120 aa10.35□□□□□ -0.75
TPM1-228ENST00000560975 INAFM1C9JVW0 142 aa10.34□□□□□ -0.75
TPM1-228ENST00000560975 FLNBO75369 2602 aaKnown RBP10.33□□□□□ -0.76
TPM1-228ENST00000560975 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
TPM1-228ENST00000560975 A0A096LNI7 61 aa10.32□□□□□ -0.76
TPM1-228ENST00000560975 A6NED7 52 aa10.32□□□□□ -0.76
TPM1-228ENST00000560975 ANK2Q01484 3957 aa10.32□□□□□ -0.76
TPM1-228ENST00000560975 CD164Q04900 197 aa10.31□□□□□ -0.76
TPM1-228ENST00000560975 LCA10Q71F78 164 aa10.31□□□□□ -0.76
TPM1-228ENST00000560975 COA5Q86WW8 74 aa10.31□□□□□ -0.76
TPM1-228ENST00000560975 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
TPM1-228ENST00000560975 NSD1Q96L73 2696 aaPredicted RBP10.3□□□□□ -0.76
TPM1-228ENST00000560975 H0Y9J4 135 aa10.29□□□□□ -0.76
TPM1-228ENST00000560975 KRTAP10-11P60412 298 aa10.29□□□□□ -0.76
TPM1-228ENST00000560975 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
TPM1-228ENST00000560975 PCOTHQ58A44 107 aa10.29□□□□□ -0.76
TPM1-228ENST00000560975 H3BPC8 53 aa10.28□□□□□ -0.76
TPM1-228ENST00000560975 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.77
TPM1-228ENST00000560975 A8MWP4 228 aa10.27□□□□□ -0.77
TPM1-228ENST00000560975 KTN1-AS1Q86SY8 53 aa10.26□□□□□ -0.77
TPM1-228ENST00000560975 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
TPM1-228ENST00000560975 LINC00472Q9H8W2 130 aa10.24□□□□□ -0.77
TPM1-228ENST00000560975 Q75L30 129 aa10.24□□□□□ -0.77
TPM1-228ENST00000560975 FBN1P35555 2871 aaKnown RBP10.23□□□□□ -0.77
TPM1-228ENST00000560975 MAST4O15021 2626 aa10.23□□□□□ -0.77
TPM1-228ENST00000560975 DNAH1Q9P2D7 4330 aa10.22□□□□□ -0.77
TPM1-228ENST00000560975 SPAG11AQ6PDA7 123 aa10.22□□□□□ -0.77
TPM1-228ENST00000560975 ATP11AUNQ6ZP68 121 aa10.21□□□□□ -0.77
TPM1-228ENST00000560975 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.78
TPM1-228ENST00000560975 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.78
TPM1-228ENST00000560975 IGLV7-46A0A075B6I9 117 aa10.2□□□□□ -0.78
TPM1-228ENST00000560975 MMP24-AS1A0A0U1RRL7 71 aa10.2□□□□□ -0.78
TPM1-228ENST00000560975 DNAH10Q8IVF4 4471 aa10.2□□□□□ -0.78
TPM1-228ENST00000560975 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
TPM1-228ENST00000560975 LOC101927531A0A1B0GV80 90 aa10.19□□□□□ -0.78
TPM1-228ENST00000560975 CSMD3Q7Z407 3707 aa10.19□□□□□ -0.78
TPM1-228ENST00000560975 NOTCH1P46531 2555 aa10.18□□□□□ -0.78
TPM1-228ENST00000560975 CHTF8P0CG12 524 aa10.17□□□□□ -0.78
TPM1-228ENST00000560975 A6NN06 94 aa10.15□□□□□ -0.78
TPM1-228ENST00000560975 CDC42SE1Q9NRR8 79 aa10.14□□□□□ -0.79
TPM1-228ENST00000560975 TENM2Q9NT68 2774 aa10.13□□□□□ -0.79
TPM1-228ENST00000560975 COL6A5A8TX70 2615 aa10.12□□□□□ -0.79
TPM1-228ENST00000560975 NDUFS5O43920 106 aa10.12□□□□□ -0.79
TPM1-228ENST00000560975 MOBPQ13875 183 aa10.1□□□□□ -0.79
TPM1-228ENST00000560975 STAB1Q9NY15 2570 aa10.1□□□□□ -0.79
TPM1-228ENST00000560975 SPINK7P58062 85 aa10.09□□□□□ -0.79
TPM1-228ENST00000560975 LINC01558Q9Y6Z2 57 aa10.09□□□□□ -0.79
TPM1-228ENST00000560975 SPRR1BP22528 89 aa10.08□□□□□ -0.8
TPM1-228ENST00000560975 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
TPM1-228ENST00000560975 IGLV9-49A0A0B4J1Y8 123 aa10.07□□□□□ -0.8
TPM1-228ENST00000560975 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
TPM1-228ENST00000560975 KRTAP1-5Q9BYS1 174 aa10.06□□□□□ -0.8
TPM1-228ENST00000560975 LYSTQ99698 3801 aa10.06□□□□□ -0.8
TPM1-228ENST00000560975 HRES1P13985 223 aa10.05□□□□□ -0.8
TPM1-228ENST00000560975 IGHV6-1A0A0B4J1U7 121 aa10.05□□□□□ -0.8
TPM1-228ENST00000560975 C8orf17Q9NRJ1 99 aa10.04□□□□□ -0.8
TPM1-228ENST00000560975 TP53AIP1Q9HCN2 124 aa10.03□□□□□ -0.8
TPM1-228ENST00000560975 PLAC8Q9NZF1 115 aa10.03□□□□□ -0.8
TPM1-228ENST00000560975 Q96NJ1 140 aa10.03□□□□□ -0.8
TPM1-228ENST00000560975 KMT2BQ9UMN6 2715 aaPredicted RBP10.03□□□□□ -0.8
TPM1-228ENST00000560975 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.8
TPM1-228ENST00000560975 J3QKU1 62 aa10□□□□□ -0.81
TPM1-228ENST00000560975 Q6ZR54 194 aa10□□□□□ -0.81
TPM1-228ENST00000560975 CMYA5Q8N3K9 4069 aa9.99□□□□□ -0.81
TPM1-228ENST00000560975 DNAH9Q9NYC9 4486 aa9.98□□□□□ -0.81
TPM1-228ENST00000560975 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
TPM1-228ENST00000560975 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
TPM1-228ENST00000560975 K7EIL1 84 aa9.96□□□□□ -0.81
TPM1-228ENST00000560975 A0A087X002 238 aa9.96□□□□□ -0.82
TPM1-228ENST00000560975 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.82
TPM1-228ENST00000560975 PANO1I0J062 215 aa9.94□□□□□ -0.82
TPM1-228ENST00000560975 A0A1B0GVX0 72 aa9.94□□□□□ -0.82
TPM1-228ENST00000560975 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
TPM1-228ENST00000560975 MRPL34Q9BQ48 92 aaKnown RBP9.93□□□□□ -0.82
TPM1-228ENST00000560975 HUWE1Q7Z6Z7 4374 aaKnown RBP9.92□□□□□ -0.82
TPM1-228ENST00000560975 UBE2DNLQ8IWF7 75 aa9.9□□□□□ -0.82
TPM1-228ENST00000560975 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
TPM1-228ENST00000560975 PRAC1Q96KF2 57 aa9.89□□□□□ -0.83
TPM1-228ENST00000560975 ANAPC11Q9NYG5 84 aa9.89□□□□□ -0.83
TPM1-228ENST00000560975 STAB2Q8WWQ8 2551 aa9.87□□□□□ -0.83
TPM1-228ENST00000560975 DNAH3Q8TD57 4116 aa9.87□□□□□ -0.83
TPM1-228ENST00000560975 Q5W150 140 aa9.86□□□□□ -0.83
TPM1-228ENST00000560975 C14orf177Q52M58 125 aa9.85□□□□□ -0.83
TPM1-228ENST00000560975 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
TPM1-228ENST00000560975 LINC00313P59037 77 aa9.85□□□□□ -0.83
TPM1-228ENST00000560975 MDFIQ99750 246 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms