RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 IGLV8-61A0A075B6I0 122 aa7.91□□□□□ -1.14
SNX1-211ENST00000560829 KRTAP10-1P60331 282 aa7.91□□□□□ -1.14
SNX1-211ENST00000560829 LINC00336Q6ZUF6 198 aa7.91□□□□□ -1.14
SNX1-211ENST00000560829 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
SNX1-211ENST00000560829 UBL5Q9BZL1 73 aa7.91□□□□□ -1.14
SNX1-211ENST00000560829 A0A1B0GW54 56 aa7.9□□□□□ -1.14
SNX1-211ENST00000560829 C1orf137Q5JT78 98 aa7.9□□□□□ -1.14
SNX1-211ENST00000560829 F8WEM9 126 aa7.89□□□□□ -1.15
SNX1-211ENST00000560829 PCP4P48539 62 aa7.88□□□□□ -1.15
SNX1-211ENST00000560829 ATP5EP2Q5VTU8 51 aa7.88□□□□□ -1.15
SNX1-211ENST00000560829 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
SNX1-211ENST00000560829 ZNF861PO60384 105 aa7.87□□□□□ -1.15
SNX1-211ENST00000560829 LRP1BQ9NZR2 4599 aa7.87□□□□□ -1.15
SNX1-211ENST00000560829 A0A1W2PNM2 257 aa7.87□□□□□ -1.15
SNX1-211ENST00000560829 Q6ZVQ6 151 aa7.87□□□□□ -1.15
SNX1-211ENST00000560829 Q8NBF4 154 aa7.87□□□□□ -1.15
SNX1-211ENST00000560829 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
SNX1-211ENST00000560829 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
SNX1-211ENST00000560829 LINC00483Q53H64 154 aa7.85□□□□□ -1.15
SNX1-211ENST00000560829 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
SNX1-211ENST00000560829 IGLV7-43P04211 117 aa7.84□□□□□ -1.15
SNX1-211ENST00000560829 IGFL1Q6UW32 110 aa7.84□□□□□ -1.15
SNX1-211ENST00000560829 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
SNX1-211ENST00000560829 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
SNX1-211ENST00000560829 CRYGAP11844 174 aa7.82□□□□□ -1.16
SNX1-211ENST00000560829 A0A1B0GVY2 172 aa7.81□□□□□ -1.16
SNX1-211ENST00000560829 CXCL6P80162 114 aa7.81□□□□□ -1.16
SNX1-211ENST00000560829 PKHD1P08F94 4074 aa7.8□□□□□ -1.16
SNX1-211ENST00000560829 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
SNX1-211ENST00000560829 HAMPP81172 84 aa7.79□□□□□ -1.16
SNX1-211ENST00000560829 NREPQ16612 68 aa7.79□□□□□ -1.16
SNX1-211ENST00000560829 RPL37AP61513 92 aaKnown RBP7.78□□□□□ -1.16
SNX1-211ENST00000560829 A0A0G2JQZ4 141 aa7.77□□□□□ -1.17
SNX1-211ENST00000560829 FAM236AA0A1B0GUQ0 79 aa7.76□□□□□ -1.17
SNX1-211ENST00000560829 FAM236BA0A1B0GV22 79 aa7.76□□□□□ -1.17
SNX1-211ENST00000560829 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
SNX1-211ENST00000560829 A0A087WVE0 104 aa7.74□□□□□ -1.17
SNX1-211ENST00000560829 APOBP04114 4563 aaKnown RBP7.73□□□□□ -1.17
SNX1-211ENST00000560829 IGLV9-49A0A0B4J1Y8 123 aa7.72□□□□□ -1.17
SNX1-211ENST00000560829 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
SNX1-211ENST00000560829 A0A087WSZ3 146 aa7.72□□□□□ -1.17
SNX1-211ENST00000560829 BPY2O14599 106 aa7.72□□□□□ -1.17
SNX1-211ENST00000560829 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
SNX1-211ENST00000560829 ANAPC13Q9BS18 74 aa7.71□□□□□ -1.18
SNX1-211ENST00000560829 ANAPC11Q9NYG5 84 aa7.7□□□□□ -1.18
SNX1-211ENST00000560829 RYR3Q15413 4870 aa7.69□□□□□ -1.18
SNX1-211ENST00000560829 MOBPQ13875 183 aa7.69□□□□□ -1.18
SNX1-211ENST00000560829 ATOX1O00244 68 aa7.67□□□□□ -1.18
SNX1-211ENST00000560829 IGKV4-1P06312 121 aa7.66□□□□□ -1.18
SNX1-211ENST00000560829 DSCR10P59022 87 aa7.65□□□□□ -1.18
SNX1-211ENST00000560829 FAM229BQ4G0N7 80 aa7.65□□□□□ -1.18
SNX1-211ENST00000560829 SSBP3-AS1Q7Z2R9 100 aa7.64□□□□□ -1.19
SNX1-211ENST00000560829 Q8N9L7 120 aa7.64□□□□□ -1.19
SNX1-211ENST00000560829 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
SNX1-211ENST00000560829 KRTAP1-4P0C5Y4 121 aa7.63□□□□□ -1.19
SNX1-211ENST00000560829 FAT1Q14517 4588 aa7.61□□□□□ -1.19
SNX1-211ENST00000560829 CD164Q04900 197 aa7.61□□□□□ -1.19
SNX1-211ENST00000560829 SS18L2Q9UHA2 77 aa7.61□□□□□ -1.19
SNX1-211ENST00000560829 A0A087X002 238 aa7.6□□□□□ -1.19
SNX1-211ENST00000560829 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
SNX1-211ENST00000560829 K7EQZ3 153 aa7.6□□□□□ -1.19
SNX1-211ENST00000560829 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
SNX1-211ENST00000560829 J3KT08 172 aa7.58□□□□□ -1.2
SNX1-211ENST00000560829 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
SNX1-211ENST00000560829 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
SNX1-211ENST00000560829 SMR3BP02814 79 aaPredicted RBP7.58□□□□□ -1.2
SNX1-211ENST00000560829 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
SNX1-211ENST00000560829 SERP2Q8N6R1 65 aa7.58□□□□□ -1.2
SNX1-211ENST00000560829 Q96NJ1 140 aa7.58□□□□□ -1.2
SNX1-211ENST00000560829 COX7CP15954 63 aa7.57□□□□□ -1.2
SNX1-211ENST00000560829 A8MWP4 228 aa7.55□□□□□ -1.2
SNX1-211ENST00000560829 CCDC179H3BU77 68 aa7.55□□□□□ -1.2
SNX1-211ENST00000560829 UQCRQO14949 82 aa7.55□□□□□ -1.2
SNX1-211ENST00000560829 SMIM20Q8N5G0 67 aa7.55□□□□□ -1.2
SNX1-211ENST00000560829 PLA2G1BP04054 148 aaKnown RBP7.54□□□□□ -1.2
SNX1-211ENST00000560829 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
SNX1-211ENST00000560829 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
SNX1-211ENST00000560829 ASB16-AS1Q495Z4 193 aa7.52□□□□□ -1.21
SNX1-211ENST00000560829 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
SNX1-211ENST00000560829 Q5XG85 94 aa7.51□□□□□ -1.21
SNX1-211ENST00000560829 RYR1P21817 5038 aa7.5□□□□□ -1.21
SNX1-211ENST00000560829 HSPG2P98160 4391 aa7.49□□□□□ -1.21
SNX1-211ENST00000560829 NDUFB1O75438 58 aa7.49□□□□□ -1.21
SNX1-211ENST00000560829 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
SNX1-211ENST00000560829 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
SNX1-211ENST00000560829 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
SNX1-211ENST00000560829 KRTAP29-1A8MX34 341 aaPredicted RBP7.47□□□□□ -1.21
SNX1-211ENST00000560829 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
SNX1-211ENST00000560829 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
SNX1-211ENST00000560829 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
SNX1-211ENST00000560829 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
SNX1-211ENST00000560829 FAM229AH3BQW9 127 aa7.44□□□□□ -1.22
SNX1-211ENST00000560829 CASC2Q6XLA1 102 aa7.44□□□□□ -1.22
SNX1-211ENST00000560829 LIMD2Q9BT23 127 aa7.44□□□□□ -1.22
SNX1-211ENST00000560829 SPINK1P00995 79 aa7.43□□□□□ -1.22
SNX1-211ENST00000560829 WFDC13Q8IUB5 93 aa7.43□□□□□ -1.22
SNX1-211ENST00000560829 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
SNX1-211ENST00000560829 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
SNX1-211ENST00000560829 C8orf17Q9NRJ1 99 aa7.41□□□□□ -1.22
SNX1-211ENST00000560829 C1orf195Q5TG92 126 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms