RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
TRPM1-211ENST00000560658 TENM3Q9P273 2699 aa11.1□□□□□ -0.63
TRPM1-211ENST00000560658 PRLHP81277 87 aa11.09□□□□□ -0.63
TRPM1-211ENST00000560658 ZCCHC13Q8WW36 166 aaKnown RBP11.09□□□□□ -0.63
TRPM1-211ENST00000560658 MEGF8Q7Z7M0 2845 aa11.09□□□□□ -0.63
TRPM1-211ENST00000560658 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-211ENST00000560658 C9orf163Q8N9P6 203 aa11.08□□□□□ -0.64
TRPM1-211ENST00000560658 NDUFB1O75438 58 aa11.07□□□□□ -0.64
TRPM1-211ENST00000560658 B9D2Q9BPU9 175 aa11.06□□□□□ -0.64
TRPM1-211ENST00000560658 FP248Q71RG6 208 aaPredicted RBP11.06□□□□□ -0.64
TRPM1-211ENST00000560658 A0A087WSZ3 146 aa11.05□□□□□ -0.64
TRPM1-211ENST00000560658 MGAM2Q2M2H8 2515 aa11.05□□□□□ -0.64
TRPM1-211ENST00000560658 H3BPC8 53 aa11.04□□□□□ -0.64
TRPM1-211ENST00000560658 MP68P56378 58 aa11.02□□□□□ -0.64
TRPM1-211ENST00000560658 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
TRPM1-211ENST00000560658 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
TRPM1-211ENST00000560658 NUPR2A6NF83 97 aa11□□□□□ -0.65
TRPM1-211ENST00000560658 HUWE1Q7Z6Z7 4374 aaKnown RBP11□□□□□ -0.65
TRPM1-211ENST00000560658 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
TRPM1-211ENST00000560658 NBDYA0A0U1RRE5 68 aa10.98□□□□□ -0.65
TRPM1-211ENST00000560658 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
TRPM1-211ENST00000560658 RPL37AP61513 92 aaKnown RBP10.98□□□□□ -0.65
TRPM1-211ENST00000560658 A8MWP4 228 aa10.98□□□□□ -0.65
TRPM1-211ENST00000560658 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
TRPM1-211ENST00000560658 PRR15Q8IV56 129 aa10.98□□□□□ -0.65
TRPM1-211ENST00000560658 hDV103S1A0JD37 113 aa10.96□□□□□ -0.65
TRPM1-211ENST00000560658 LINC00472Q9H8W2 130 aa10.95□□□□□ -0.66
TRPM1-211ENST00000560658 CHTF8P0CG12 524 aa10.95□□□□□ -0.66
TRPM1-211ENST00000560658 KRTAP13-1Q8IUC0 172 aa10.95□□□□□ -0.66
TRPM1-211ENST00000560658 PRO0628Q9UI54 55 aa10.95□□□□□ -0.66
TRPM1-211ENST00000560658 CASC2Q6XLA1 102 aa10.93□□□□□ -0.66
TRPM1-211ENST00000560658 WFDC13Q8IUB5 93 aa10.92□□□□□ -0.66
TRPM1-211ENST00000560658 TGP01266 2768 aa10.92□□□□□ -0.66
TRPM1-211ENST00000560658 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
TRPM1-211ENST00000560658 A0A0G2JQZ4 141 aa10.91□□□□□ -0.66
TRPM1-211ENST00000560658 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
TRPM1-211ENST00000560658 ZNF706Q9Y5V0 76 aaPredicted RBP10.91□□□□□ -0.66
TRPM1-211ENST00000560658 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
TRPM1-211ENST00000560658 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
TRPM1-211ENST00000560658 DEFB116Q30KQ4 102 aa10.88□□□□□ -0.67
TRPM1-211ENST00000560658 FAM229BQ4G0N7 80 aa10.87□□□□□ -0.67
TRPM1-211ENST00000560658 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
TRPM1-211ENST00000560658 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
TRPM1-211ENST00000560658 LINC00336Q6ZUF6 198 aa10.87□□□□□ -0.67
TRPM1-211ENST00000560658 C1orf64Q8NEQ6 169 aa10.87□□□□□ -0.67
TRPM1-211ENST00000560658 Q1T7F1 81 aa10.85□□□□□ -0.67
TRPM1-211ENST00000560658 H0Y9P7 68 aa10.84□□□□□ -0.67
TRPM1-211ENST00000560658 DYNC2H1Q8NCM8 4307 aaKnown RBP10.84□□□□□ -0.67
TRPM1-211ENST00000560658 LINC00208Q96KT6 92 aa10.83□□□□□ -0.68
TRPM1-211ENST00000560658 V9GYY9 64 aa10.83□□□□□ -0.68
TRPM1-211ENST00000560658 TP53AIP1Q9HCN2 124 aa10.82□□□□□ -0.68
TRPM1-211ENST00000560658 MOBPQ13875 183 aa10.81□□□□□ -0.68
TRPM1-211ENST00000560658 MPLKIPQ8TAP9 179 aa10.81□□□□□ -0.68
TRPM1-211ENST00000560658 MMP24-AS1A0A0U1RRL7 71 aa10.8□□□□□ -0.68
TRPM1-211ENST00000560658 NOTCH1P46531 2555 aa10.78□□□□□ -0.68
TRPM1-211ENST00000560658 A0A087WTM6 91 aa10.77□□□□□ -0.68
TRPM1-211ENST00000560658 ASB16-AS1Q495Z4 193 aa10.77□□□□□ -0.68
TRPM1-211ENST00000560658 PANO1I0J062 215 aa10.76□□□□□ -0.69
TRPM1-211ENST00000560658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.74□□□□□ -0.69
TRPM1-211ENST00000560658 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
TRPM1-211ENST00000560658 Q96NJ1 140 aa10.73□□□□□ -0.69
TRPM1-211ENST00000560658 PLAC8Q9NZF1 115 aa10.73□□□□□ -0.69
TRPM1-211ENST00000560658 DNAH9Q9NYC9 4486 aa10.72□□□□□ -0.69
TRPM1-211ENST00000560658 IGLV9-49A0A0B4J1Y8 123 aa10.71□□□□□ -0.69
TRPM1-211ENST00000560658 RTL8CO15255 209 aa10.7□□□□□ -0.7
TRPM1-211ENST00000560658 BRK1Q8WUW1 75 aa10.7□□□□□ -0.7
TRPM1-211ENST00000560658 ZNF861PO60384 105 aa10.69□□□□□ -0.7
TRPM1-211ENST00000560658 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
TRPM1-211ENST00000560658 C1orf195Q5TG92 126 aa10.69□□□□□ -0.7
TRPM1-211ENST00000560658 WWC2-AS2Q96NR7 200 aa10.69□□□□□ -0.7
TRPM1-211ENST00000560658 C8orf17Q9NRJ1 99 aa10.69□□□□□ -0.7
TRPM1-211ENST00000560658 DNAH10Q8IVF4 4471 aa10.67□□□□□ -0.7
TRPM1-211ENST00000560658 A0A1B0GVX0 72 aa10.67□□□□□ -0.7
TRPM1-211ENST00000560658 IGLV7-46A0A075B6I9 117 aa10.66□□□□□ -0.7
TRPM1-211ENST00000560658 Q6ZR54 194 aa10.66□□□□□ -0.7
TRPM1-211ENST00000560658 PSORS1C2Q9UIG4 136 aa10.66□□□□□ -0.7
TRPM1-211ENST00000560658 PRR4Q16378 134 aa10.65□□□□□ -0.7
TRPM1-211ENST00000560658 LIMD2Q9BT23 127 aa10.63□□□□□ -0.71
TRPM1-211ENST00000560658 PRKDCP78527 4128 aaKnown RBP10.62□□□□□ -0.71
TRPM1-211ENST00000560658 CD164Q04900 197 aa10.62□□□□□ -0.71
TRPM1-211ENST00000560658 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
TRPM1-211ENST00000560658 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
TRPM1-211ENST00000560658 IGHV6-1A0A0B4J1U7 121 aa10.56□□□□□ -0.72
TRPM1-211ENST00000560658 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
TRPM1-211ENST00000560658 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
TRPM1-211ENST00000560658 VPS13DQ5THJ4 4388 aa10.54□□□□□ -0.72
TRPM1-211ENST00000560658 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
TRPM1-211ENST00000560658 Q8N9P0 234 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-211ENST00000560658 COA5Q86WW8 74 aa10.52□□□□□ -0.73
TRPM1-211ENST00000560658 C8orf87E5RJ46 101 aa10.51□□□□□ -0.73
TRPM1-211ENST00000560658 NDUFS5O43920 106 aa10.51□□□□□ -0.73
TRPM1-211ENST00000560658 PLECQ15149 4684 aaKnown RBP10.51□□□□□ -0.73
TRPM1-211ENST00000560658 LOC101927531A0A1B0GV80 90 aa10.51□□□□□ -0.73
TRPM1-211ENST00000560658 PSPHP1O15172 72 aa10.51□□□□□ -0.73
TRPM1-211ENST00000560658 COL7A1Q02388 2944 aa10.49□□□□□ -0.73
TRPM1-211ENST00000560658 A8MUN3 132 aa10.47□□□□□ -0.73
TRPM1-211ENST00000560658 Q5VV11 94 aa10.46□□□□□ -0.74
TRPM1-211ENST00000560658 LYSTQ99698 3801 aa10.45□□□□□ -0.74
TRPM1-211ENST00000560658 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
TRPM1-211ENST00000560658 KMT2CQ8NEZ4 4911 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms