RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
PKNOX1-209ENST00000560448 hADV29S1A0JD25 119 aa8.4□□□□□ -1.06
PKNOX1-209ENST00000560448 KRTAP1-4P0C5Y4 121 aa8.4□□□□□ -1.06
PKNOX1-209ENST00000560448 COX7BP24311 80 aa8.4□□□□□ -1.06
PKNOX1-209ENST00000560448 ORMDL1Q9P0S3 153 aa8.4□□□□□ -1.06
PKNOX1-209ENST00000560448 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
PKNOX1-209ENST00000560448 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
PKNOX1-209ENST00000560448 SNCGO76070 127 aa8.38□□□□□ -1.07
PKNOX1-209ENST00000560448 FAM229BQ4G0N7 80 aa8.38□□□□□ -1.07
PKNOX1-209ENST00000560448 Q6ZRX8 168 aa8.38□□□□□ -1.07
PKNOX1-209ENST00000560448 OBSCN-AS1Q96MR7 158 aa8.38□□□□□ -1.07
PKNOX1-209ENST00000560448 VPS25Q9BRG1 176 aa8.37□□□□□ -1.07
PKNOX1-209ENST00000560448 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
PKNOX1-209ENST00000560448 B5MCH6 92 aa8.37□□□□□ -1.07
PKNOX1-209ENST00000560448 CRYGAP11844 174 aa8.36□□□□□ -1.07
PKNOX1-209ENST00000560448 TMEM256-PLSCR3K7ERE1 68 aa8.35□□□□□ -1.07
PKNOX1-209ENST00000560448 CDIP1Q9H305 208 aa8.35□□□□□ -1.07
PKNOX1-209ENST00000560448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
PKNOX1-209ENST00000560448 Q6ZQY7 126 aa8.33□□□□□ -1.08
PKNOX1-209ENST00000560448 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
PKNOX1-209ENST00000560448 H3BQ85 93 aa8.32□□□□□ -1.08
PKNOX1-209ENST00000560448 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
PKNOX1-209ENST00000560448 DHRS4-AS1Q9P1J3 65 aa8.32□□□□□ -1.08
PKNOX1-209ENST00000560448 TNXBP22105 4242 aa8.32□□□□□ -1.08
PKNOX1-209ENST00000560448 FAM240AA0A1B0GVK7 77 aa8.31□□□□□ -1.08
PKNOX1-209ENST00000560448 SPRR4Q96PI1 79 aa8.31□□□□□ -1.08
PKNOX1-209ENST00000560448 Q9BRP9 147 aa8.29□□□□□ -1.08
PKNOX1-209ENST00000560448 A0A087X002 238 aa8.29□□□□□ -1.08
PKNOX1-209ENST00000560448 JMJD7-PLA2G4BH0Y9G9 81 aa8.29□□□□□ -1.08
PKNOX1-209ENST00000560448 TYMSOSQ8TAI1 123 aa8.29□□□□□ -1.08
PKNOX1-209ENST00000560448 LINC00483Q53H64 154 aa8.28□□□□□ -1.08
PKNOX1-209ENST00000560448 C14orf132Q9NPU4 83 aa8.28□□□□□ -1.08
PKNOX1-209ENST00000560448 GHRHP01286 108 aa8.26□□□□□ -1.09
PKNOX1-209ENST00000560448 ACYP1P07311 99 aa8.26□□□□□ -1.09
PKNOX1-209ENST00000560448 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
PKNOX1-209ENST00000560448 LINC01547P58512 204 aaPredicted RBP8.24□□□□□ -1.09
PKNOX1-209ENST00000560448 SIGMAR1Q99720 223 aa8.24□□□□□ -1.09
PKNOX1-209ENST00000560448 ANAPC11Q9NYG5 84 aa8.23□□□□□ -1.09
PKNOX1-209ENST00000560448 CCKP06307 115 aa8.22□□□□□ -1.09
PKNOX1-209ENST00000560448 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
PKNOX1-209ENST00000560448 GAGE2AQ6NT46 116 aa8.22□□□□□ -1.09
PKNOX1-209ENST00000560448 LAMTOR3Q9UHA4 124 aa8.22□□□□□ -1.09
PKNOX1-209ENST00000560448 LOC110117498A0A087WWA1 95 aa8.21□□□□□ -1.09
PKNOX1-209ENST00000560448 A0A1B0GV72 72 aa8.21□□□□□ -1.09
PKNOX1-209ENST00000560448 SPRR1BP22528 89 aa8.21□□□□□ -1.09
PKNOX1-209ENST00000560448 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.09
PKNOX1-209ENST00000560448 RBM3P98179 157 aaKnown RBP8.21□□□□□ -1.09
PKNOX1-209ENST00000560448 Q8N377 158 aa8.21□□□□□ -1.09
PKNOX1-209ENST00000560448 IGLV5-48A0A075B6I7 105 aa8.2□□□□□ -1.1
PKNOX1-209ENST00000560448 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
PKNOX1-209ENST00000560448 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
PKNOX1-209ENST00000560448 Q6ZQT0 140 aa8.2□□□□□ -1.1
PKNOX1-209ENST00000560448 SSBP3-AS1Q7Z2R9 100 aa8.19□□□□□ -1.1
PKNOX1-209ENST00000560448 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
PKNOX1-209ENST00000560448 ST20-AS1Q8NBB2 130 aa8.19□□□□□ -1.1
PKNOX1-209ENST00000560448 TRBV7-4A0A0J9YYF1 115 aa8.18□□□□□ -1.1
PKNOX1-209ENST00000560448 PDE6GP18545 87 aa8.17□□□□□ -1.1
PKNOX1-209ENST00000560448 DEFB105AQ8NG35 78 aa8.17□□□□□ -1.1
PKNOX1-209ENST00000560448 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
PKNOX1-209ENST00000560448 DSCR8Q96T75 97 aa8.16□□□□□ -1.1
PKNOX1-209ENST00000560448 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
PKNOX1-209ENST00000560448 Q8NBF4 154 aa8.14□□□□□ -1.11
PKNOX1-209ENST00000560448 RPS29P62273 56 aaKnown RBP8.13□□□□□ -1.11
PKNOX1-209ENST00000560448 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
PKNOX1-209ENST00000560448 HMCN2Q8NDA2 5059 aa8.13□□□□□ -1.11
PKNOX1-209ENST00000560448 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
PKNOX1-209ENST00000560448 SPINK1P00995 79 aa8.12□□□□□ -1.11
PKNOX1-209ENST00000560448 MOBPQ13875 183 aa8.12□□□□□ -1.11
PKNOX1-209ENST00000560448 SMIM29Q86T20 159 aa8.12□□□□□ -1.11
PKNOX1-209ENST00000560448 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
PKNOX1-209ENST00000560448 C21orf62-AS1Q17RA5 79 aa8.11□□□□□ -1.11
PKNOX1-209ENST00000560448 C9orf153Q5TBE3 101 aa8.11□□□□□ -1.11
PKNOX1-209ENST00000560448 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.11
PKNOX1-209ENST00000560448 Q6Q795 121 aa8.09□□□□□ -1.11
PKNOX1-209ENST00000560448 Q6JHZ5 121 aa8.07□□□□□ -1.12
PKNOX1-209ENST00000560448 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
PKNOX1-209ENST00000560448 F8WEM9 126 aa8.05□□□□□ -1.12
PKNOX1-209ENST00000560448 CD164Q04900 197 aa8.05□□□□□ -1.12
PKNOX1-209ENST00000560448 PCP4P48539 62 aa8.04□□□□□ -1.12
PKNOX1-209ENST00000560448 IMUPQ9GZP8 106 aa8.04□□□□□ -1.12
PKNOX1-209ENST00000560448 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
PKNOX1-209ENST00000560448 UBL5Q9BZL1 73 aa8.03□□□□□ -1.12
PKNOX1-209ENST00000560448 PRR4Q16378 134 aa8.02□□□□□ -1.13
PKNOX1-209ENST00000560448 Q6ZVQ6 151 aa8.02□□□□□ -1.13
PKNOX1-209ENST00000560448 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
PKNOX1-209ENST00000560448 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
PKNOX1-209ENST00000560448 A0A1B0GW54 56 aa8.01□□□□□ -1.13
PKNOX1-209ENST00000560448 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
PKNOX1-209ENST00000560448 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
PKNOX1-209ENST00000560448 IGFL1Q6UW32 110 aa7.99□□□□□ -1.13
PKNOX1-209ENST00000560448 Q5XG85 94 aa7.97□□□□□ -1.13
PKNOX1-209ENST00000560448 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
PKNOX1-209ENST00000560448 A0A0G2JQZ4 141 aa7.95□□□□□ -1.14
PKNOX1-209ENST00000560448 TPRXLQ17RH7 258 aa7.95□□□□□ -1.14
PKNOX1-209ENST00000560448 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
PKNOX1-209ENST00000560448 CXCL6P80162 114 aa7.94□□□□□ -1.14
PKNOX1-209ENST00000560448 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
PKNOX1-209ENST00000560448 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
PKNOX1-209ENST00000560448 NREPQ16612 68 aa7.92□□□□□ -1.14
PKNOX1-209ENST00000560448 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms