RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 ZNF56Q15929 161 aa3.71□□□□□ -1.82
USP8-210ENST00000560379 SPATA45Q537H7 98 aa3.71□□□□□ -1.82
USP8-210ENST00000560379 C20orf166-AS1Q96NR2 134 aa3.71□□□□□ -1.82
USP8-210ENST00000560379 V9GYV3 84 aa3.71□□□□□ -1.82
USP8-210ENST00000560379 DNAH10Q8IVF4 4471 aa3.71□□□□□ -1.82
USP8-210ENST00000560379 FAT2Q9NYQ8 4349 aa3.71□□□□□ -1.82
USP8-210ENST00000560379 TRBV7-3A0A075B6L6 115 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 A0A1B0GU33 70 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 A0A1B0GUT8 65 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 HIGD1CA8MV81 97 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 LELP1Q5T871 98 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 LYPD5Q6UWN5 251 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 ST20-AS1Q8NBB2 130 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 C18orf32Q8TCD1 76 aa3.7□□□□□ -1.82
USP8-210ENST00000560379 NBDYA0A0U1RRE5 68 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 MUC21A0A140T8X8 626 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 SMIM27A0A1W2PRY6 76 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 C16orf90A8MZG2 172 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 H3BUT2 72 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 LINC00315P59091 139 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 UBE2D3P61077 147 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 UBE2D2P62837 147 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 LINC01556Q5JQF7 62 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 CASC2Q6XLA1 102 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 LINC01600Q96MT4 127 aa3.69□□□□□ -1.82
USP8-210ENST00000560379 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
USP8-210ENST00000560379 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
USP8-210ENST00000560379 M0QY20 66 aa3.68□□□□□ -1.82
USP8-210ENST00000560379 NDUFC1O43677 76 aa3.68□□□□□ -1.82
USP8-210ENST00000560379 MGPP08493 103 aa3.68□□□□□ -1.82
USP8-210ENST00000560379 C9orf116Q5BN46 136 aaPredicted RBP3.68□□□□□ -1.82
USP8-210ENST00000560379 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
USP8-210ENST00000560379 NXT2Q9NPJ8 142 aaKnown RBP3.68□□□□□ -1.82
USP8-210ENST00000560379 PKHD1P08F94 4074 aa3.68□□□□□ -1.82
USP8-210ENST00000560379 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
USP8-210ENST00000560379 IGLV2-18A0A075B6J9 118 aa3.67□□□□□ -1.82
USP8-210ENST00000560379 PPP1R17O96001 155 aa3.67□□□□□ -1.82
USP8-210ENST00000560379 BAALC-AS2P0C853 105 aa3.67□□□□□ -1.82
USP8-210ENST00000560379 WFDC10BQ8IUB3 73 aa3.67□□□□□ -1.82
USP8-210ENST00000560379 TRBV25-1A0A075B6N4 114 aa3.66□□□□□ -1.82
USP8-210ENST00000560379 IGHV3-64A0A075B6Q5 118 aa3.66□□□□□ -1.82
USP8-210ENST00000560379 TRBV6-8A0A0A6YYG3 113 aa3.66□□□□□ -1.82
USP8-210ENST00000560379 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
USP8-210ENST00000560379 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
USP8-210ENST00000560379 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 C7orf77A4D0Y5 90 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 ELOBQ15370 118 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 PMCHL1Q16048 86 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 HIGD1BQ9P298 99 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.83
USP8-210ENST00000560379 PKD1P98161 4303 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 TRBV10-3A0A0K0K1G6 114 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 SDHAF1A6NFY7 115 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 HCG22E2RYF7 251 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 M0R2N4 97 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 RTL8CO15255 209 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 P0C880 135 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
USP8-210ENST00000560379 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
USP8-210ENST00000560379 I3L3M4 83 aa3.63□□□□□ -1.83
USP8-210ENST00000560379 RPL39LQ96EH5 51 aaKnown RBP3.63□□□□□ -1.83
USP8-210ENST00000560379 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 H7BZZ5 65 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 BCE1O60756 84 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 ERC2-IT1O76042 136 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 POLR2KP53803 58 aaKnown RBP3.62□□□□□ -1.83
USP8-210ENST00000560379 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 SMIM2Q9BVW6 85 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 PRR34Q9NV39 138 aa3.62□□□□□ -1.83
USP8-210ENST00000560379 DYNC1H1Q14204 4646 aaKnown RBP3.61□□□□□ -1.83
USP8-210ENST00000560379 D6R8Y8 96 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 K7EMI3 77 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 IGHV3-30P01768 117 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 IGHV3-33P01772 117 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 IGHV3-30-5P0DP03 117 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
USP8-210ENST00000560379 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
USP8-210ENST00000560379 PSCAO43653 123 aa3.6□□□□□ -1.83
USP8-210ENST00000560379 ANGP03950 147 aaKnown RBP3.6□□□□□ -1.83
USP8-210ENST00000560379 FCER1GP30273 86 aa3.6□□□□□ -1.83
USP8-210ENST00000560379 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
USP8-210ENST00000560379 A0A087WTM6 91 aa3.59□□□□□ -1.83
USP8-210ENST00000560379 ACYP1P07311 99 aa3.59□□□□□ -1.83
USP8-210ENST00000560379 KLKP1Q107X0 134 aa3.59□□□□□ -1.83
USP8-210ENST00000560379 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.59□□□□□ -1.83
USP8-210ENST00000560379 TIMM21Q9BVV7 248 aa3.59□□□□□ -1.83
USP8-210ENST00000560379 LRP1BQ9NZR2 4599 aa3.59□□□□□ -1.84
USP8-210ENST00000560379 KIAA1109Q2LD37 5005 aa3.58□□□□□ -1.84
USP8-210ENST00000560379 IGKV2D-24A0A075B6R9 120 aa3.58□□□□□ -1.84
USP8-210ENST00000560379 LINC01549A6NIU2 74 aa3.58□□□□□ -1.84
USP8-210ENST00000560379 KRTAP26-1Q6PEX3 210 aa3.58□□□□□ -1.84
USP8-210ENST00000560379 ENHOQ6UWT2 76 aa3.58□□□□□ -1.84
USP8-210ENST00000560379 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
USP8-210ENST00000560379 UBE2D4Q9Y2X8 147 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms