RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ACACAQ13085 2346 aa2.06□□□□□ -2.08
HMGB3P26-201ENST00000560051 SPTBN1Q01082 2364 aaKnown RBP2.06□□□□□ -2.08
HMGB3P26-201ENST00000560051 DEFB103AP81534 67 aa2.05□□□□□ -2.08
HMGB3P26-201ENST00000560051 DEFB119Q8N690 84 aa2.05□□□□□ -2.08
HMGB3P26-201ENST00000560051 DEFB105AQ8NG35 78 aa2.05□□□□□ -2.08
HMGB3P26-201ENST00000560051 PRO0255Q9UI72 69 aa2.05□□□□□ -2.08
HMGB3P26-201ENST00000560051 APLNQ9ULZ1 77 aa2.05□□□□□ -2.08
HMGB3P26-201ENST00000560051 SPTBN2O15020 2390 aa2.04□□□□□ -2.08
HMGB3P26-201ENST00000560051 SPRR1BP22528 89 aa2.04□□□□□ -2.08
HMGB3P26-201ENST00000560051 HIVEP2P31629 2446 aa2.04□□□□□ -2.08
HMGB3P26-201ENST00000560051 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P26-201ENST00000560051 COX14Q96I36 57 aa2.04□□□□□ -2.08
HMGB3P26-201ENST00000560051 H0YGG7 62 aa2.03□□□□□ -2.08
HMGB3P26-201ENST00000560051 PRLHP81277 87 aa2.03□□□□□ -2.08
HMGB3P26-201ENST00000560051 LELP1Q5T871 98 aa2.03□□□□□ -2.08
HMGB3P26-201ENST00000560051 DEFB104AQ8WTQ1 72 aa2.03□□□□□ -2.08
HMGB3P26-201ENST00000560051 BAHCC1Q9P281 2608 aa2.03□□□□□ -2.09
HMGB3P26-201ENST00000560051 KRTAP10-1P60331 282 aa2.02□□□□□ -2.09
HMGB3P26-201ENST00000560051 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
HMGB3P26-201ENST00000560051 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
HMGB3P26-201ENST00000560051 H3BUX3 64 aa2.01□□□□□ -2.09
HMGB3P26-201ENST00000560051 ABCA2Q9BZC7 2435 aa2□□□□□ -2.09
HMGB3P26-201ENST00000560051 S4R3F8 94 aa2□□□□□ -2.09
HMGB3P26-201ENST00000560051 CEP250Q9BV73 2442 aa1.99□□□□□ -2.09
HMGB3P26-201ENST00000560051 DSPP15924 2871 aaKnown RBP1.97□□□□□ -2.09
HMGB3P26-201ENST00000560051 CREBBPQ92793 2442 aa1.97□□□□□ -2.09
HMGB3P26-201ENST00000560051 GVINP1Q7Z2Y8 2422 aa1.96□□□□□ -2.1
HMGB3P26-201ENST00000560051 MUC6Q6W4X9 2439 aa1.96□□□□□ -2.1
HMGB3P26-201ENST00000560051 ABCA12Q86UK0 2595 aa1.96□□□□□ -2.1
HMGB3P26-201ENST00000560051 STATHP02808 62 aa1.95□□□□□ -2.1
HMGB3P26-201ENST00000560051 REV3LO60673 3130 aa1.94□□□□□ -2.1
HMGB3P26-201ENST00000560051 A0A0C4DFX4 3053 aa1.93□□□□□ -2.1
HMGB3P26-201ENST00000560051 F8P00451 2351 aa1.93□□□□□ -2.1
HMGB3P26-201ENST00000560051 CEP290O15078 2479 aa1.93□□□□□ -2.1
HMGB3P26-201ENST00000560051 UBR5O95071 2799 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P26-201ENST00000560051 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
HMGB3P26-201ENST00000560051 Q9Y3F1 56 aa1.92□□□□□ -2.1
HMGB3P26-201ENST00000560051 MAP1BP46821 2468 aaKnown RBP1.92□□□□□ -2.1
HMGB3P26-201ENST00000560051 PKD1L2Q7Z442 2459 aa1.91□□□□□ -2.1
HMGB3P26-201ENST00000560051 SPINK1P00995 79 aa1.91□□□□□ -2.1
HMGB3P26-201ENST00000560051 APELAP0DMC3 54 aa1.91□□□□□ -2.1
HMGB3P26-201ENST00000560051 RHPN1-AS1Q9BWJ2 59 aa1.91□□□□□ -2.1
HMGB3P26-201ENST00000560051 M0QZ58 72 aa1.9□□□□□ -2.11
HMGB3P26-201ENST00000560051 CD52P31358 61 aa1.89□□□□□ -2.11
HMGB3P26-201ENST00000560051 NCOR1O75376 2440 aa1.88□□□□□ -2.11
HMGB3P26-201ENST00000560051 SPTBN4Q9H254 2564 aa1.88□□□□□ -2.11
HMGB3P26-201ENST00000560051 MGAQ8IWI9 3026 aa1.88□□□□□ -2.11
HMGB3P26-201ENST00000560051 TRANK1O15050 2925 aa1.86□□□□□ -2.11
HMGB3P26-201ENST00000560051 CHD7Q9P2D1 2997 aa1.85□□□□□ -2.11
HMGB3P26-201ENST00000560051 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
HMGB3P26-201ENST00000560051 CELSR2Q9HCU4 2923 aa1.85□□□□□ -2.11
HMGB3P26-201ENST00000560051 NBASA2RRP1 2371 aa1.84□□□□□ -2.11
HMGB3P26-201ENST00000560051 APC2O95996 2303 aa1.84□□□□□ -2.12
HMGB3P26-201ENST00000560051 NAV2Q8IVL1 2488 aa1.83□□□□□ -2.12
HMGB3P26-201ENST00000560051 SETD2Q9BYW2 2564 aaPredicted RBP1.83□□□□□ -2.12
HMGB3P26-201ENST00000560051 A0A0D9SG42 100 aa1.82□□□□□ -2.12
HMGB3P26-201ENST00000560051 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
HMGB3P26-201ENST00000560051 MEGF8Q7Z7M0 2845 aa1.81□□□□□ -2.12
HMGB3P26-201ENST00000560051 HTN1P15515 57 aa1.81□□□□□ -2.12
HMGB3P26-201ENST00000560051 KRTAP10-10P60014 251 aa1.81□□□□□ -2.12
HMGB3P26-201ENST00000560051 HECTD1Q9ULT8 2610 aa1.81□□□□□ -2.12
HMGB3P26-201ENST00000560051 DEFB1P60022 68 aa1.8□□□□□ -2.12
HMGB3P26-201ENST00000560051 CCDC168Q8NDH2 2452 aa1.8□□□□□ -2.12
HMGB3P26-201ENST00000560051 TENM2Q9NT68 2774 aa1.8□□□□□ -2.12
HMGB3P26-201ENST00000560051 ZNF292O60281 2723 aa1.79□□□□□ -2.12
HMGB3P26-201ENST00000560051 ASH1LQ9NR48 2969 aaKnown RBP1.79□□□□□ -2.12
HMGB3P26-201ENST00000560051 PRRC2CQ9Y520 2896 aaKnown RBP1.78□□□□□ -2.12
HMGB3P26-201ENST00000560051 TTC28Q96AY4 2481 aa1.78□□□□□ -2.12
HMGB3P26-201ENST00000560051 DMBT1Q9UGM3 2413 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P26-201ENST00000560051 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
HMGB3P26-201ENST00000560051 DEFB108BQ8NET1 73 aa1.78□□□□□ -2.12
HMGB3P26-201ENST00000560051 EP400Q96L91 3159 aa1.78□□□□□ -2.12
HMGB3P26-201ENST00000560051 COL6A5A8TX70 2615 aa1.77□□□□□ -2.13
HMGB3P26-201ENST00000560051 EP300Q09472 2414 aaPredicted RBP1.76□□□□□ -2.13
HMGB3P26-201ENST00000560051 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
HMGB3P26-201ENST00000560051 DEFB110Q30KQ9 67 aa1.76□□□□□ -2.13
HMGB3P26-201ENST00000560051 OTOGQ6ZRI0 2925 aa1.76□□□□□ -2.13
HMGB3P26-201ENST00000560051 FAM186AA6NE01 2351 aa1.76□□□□□ -2.13
HMGB3P26-201ENST00000560051 EPG5Q9HCE0 2579 aa1.75□□□□□ -2.13
HMGB3P26-201ENST00000560051 VWFP04275 2813 aa1.75□□□□□ -2.13
HMGB3P26-201ENST00000560051 RP1L1Q8IWN7 2480 aaPredicted RBP1.75□□□□□ -2.13
HMGB3P26-201ENST00000560051 WDR87Q6ZQQ6 2873 aa1.74□□□□□ -2.13
HMGB3P26-201ENST00000560051 J3QKU1 62 aa1.74□□□□□ -2.13
HMGB3P26-201ENST00000560051 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
HMGB3P26-201ENST00000560051 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
HMGB3P26-201ENST00000560051 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
HMGB3P26-201ENST00000560051 VPS13DQ5THJ4 4388 aa1.72□□□□□ -2.13
HMGB3P26-201ENST00000560051 KRTAP21-3Q3LHN1 58 aa1.72□□□□□ -2.13
HMGB3P26-201ENST00000560051 DEFB124Q8NES8 71 aa1.72□□□□□ -2.13
HMGB3P26-201ENST00000560051 POLQO75417 2590 aa1.72□□□□□ -2.13
HMGB3P26-201ENST00000560051 BDP1A6H8Y1 2624 aa1.71□□□□□ -2.13
HMGB3P26-201ENST00000560051 RIF1Q5UIP0 2472 aaKnown RBP1.71□□□□□ -2.14
HMGB3P26-201ENST00000560051 CHD6Q8TD26 2715 aa1.7□□□□□ -2.14
HMGB3P26-201ENST00000560051 PCNTO95613 3336 aa1.7□□□□□ -2.14
HMGB3P26-201ENST00000560051 NCOR2Q9Y618 2525 aa1.69□□□□□ -2.14
HMGB3P26-201ENST00000560051 H3BNG1 76 aa1.69□□□□□ -2.14
HMGB3P26-201ENST00000560051 U3KQA8 63 aa1.69□□□□□ -2.14
HMGB3P26-201ENST00000560051 LRRK2Q5S007 2527 aa1.69□□□□□ -2.14
HMGB3P26-201ENST00000560051 ATRQ13535 2644 aa1.69□□□□□ -2.14
HMGB3P26-201ENST00000560051 TNP1P09430 55 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms