RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 PCP4L1A6NKN8 68 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 LST1O00453 97 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 TAX1BP3O14907 124 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 DNAL4O96015 105 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 PRR26Q8N8Z3 221 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
LRRC28-215ENST00000559774 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
LRRC28-215ENST00000559774 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 ATXN8Q156A1 80 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 Q8N377 158 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 TYMSOSQ8TAI1 123 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 CLEC2BQ92478 149 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 ANAPC11Q9NYG5 84 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
LRRC28-215ENST00000559774 H3BUT2 72 aa5.12□□□□□ -1.59
LRRC28-215ENST00000559774 TMEM256-PLSCR3K7ERE1 68 aa5.12□□□□□ -1.59
LRRC28-215ENST00000559774 KRTAP13-2Q52LG2 175 aa5.12□□□□□ -1.59
LRRC28-215ENST00000559774 DEFB105AQ8NG35 78 aa5.12□□□□□ -1.59
LRRC28-215ENST00000559774 ORMDL1Q9P0S3 153 aa5.12□□□□□ -1.59
LRRC28-215ENST00000559774 A0A1W2PPM0 123 aa5.11□□□□□ -1.59
LRRC28-215ENST00000559774 FABP2P12104 132 aa5.11□□□□□ -1.59
LRRC28-215ENST00000559774 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
LRRC28-215ENST00000559774 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
LRRC28-215ENST00000559774 IGLV8-61A0A075B6I0 122 aa5.1□□□□□ -1.59
LRRC28-215ENST00000559774 Q8NBF4 154 aa5.1□□□□□ -1.59
LRRC28-215ENST00000559774 IGLV9-49A0A0B4J1Y8 123 aa5.09□□□□□ -1.59
LRRC28-215ENST00000559774 F8WEM9 126 aa5.09□□□□□ -1.59
LRRC28-215ENST00000559774 TCL1BO95988 128 aa5.09□□□□□ -1.59
LRRC28-215ENST00000559774 Q6JHZ5 121 aa5.09□□□□□ -1.59
LRRC28-215ENST00000559774 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
LRRC28-215ENST00000559774 NAA38Q9BRA0 125 aaKnown RBP5.09□□□□□ -1.59
LRRC28-215ENST00000559774 UBE2V1Q13404 147 aa5.08□□□□□ -1.6
LRRC28-215ENST00000559774 SPINK1P00995 79 aa5.07□□□□□ -1.6
LRRC28-215ENST00000559774 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
LRRC28-215ENST00000559774 RPS29P62273 56 aaKnown RBP5.07□□□□□ -1.6
LRRC28-215ENST00000559774 CD164Q04900 197 aa5.07□□□□□ -1.6
LRRC28-215ENST00000559774 MOBPQ13875 183 aa5.07□□□□□ -1.6
LRRC28-215ENST00000559774 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
LRRC28-215ENST00000559774 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
LRRC28-215ENST00000559774 TNXBP22105 4242 aa5.07□□□□□ -1.6
LRRC28-215ENST00000559774 DMBT1Q9UGM3 2413 aaPredicted RBP5.06□□□□□ -1.6
LRRC28-215ENST00000559774 BAALC-AS2P0C853 105 aa5.06□□□□□ -1.6
LRRC28-215ENST00000559774 SPCS1Q9Y6A9 102 aa5.05□□□□□ -1.6
LRRC28-215ENST00000559774 H3BMG7 143 aa5.04□□□□□ -1.6
LRRC28-215ENST00000559774 H3BT86 120 aa5.04□□□□□ -1.6
LRRC28-215ENST00000559774 GTF2H5Q6ZYL4 71 aa5.04□□□□□ -1.6
LRRC28-215ENST00000559774 C9JAW5 83 aa5.03□□□□□ -1.6
LRRC28-215ENST00000559774 JMJD7-PLA2G4BH0Y9G9 81 aa5.03□□□□□ -1.6
LRRC28-215ENST00000559774 C21orf62-AS1Q17RA5 79 aa5.03□□□□□ -1.6
LRRC28-215ENST00000559774 Q6Q795 121 aa5.03□□□□□ -1.6
LRRC28-215ENST00000559774 ANKRD29Q8N6D5 301 aa5.03□□□□□ -1.6
LRRC28-215ENST00000559774 K7EP34 96 aa5.02□□□□□ -1.61
LRRC28-215ENST00000559774 Q5XG85 94 aa5.02□□□□□ -1.61
LRRC28-215ENST00000559774 RBM3P98179 157 aaKnown RBP5.01□□□□□ -1.61
LRRC28-215ENST00000559774 IGFL1Q6UW32 110 aa5.01□□□□□ -1.61
LRRC28-215ENST00000559774 LIMD2Q9BT23 127 aa5.01□□□□□ -1.61
LRRC28-215ENST00000559774 PDE6GP18545 87 aa5□□□□□ -1.61
LRRC28-215ENST00000559774 TEN1Q86WV5 123 aa5□□□□□ -1.61
LRRC28-215ENST00000559774 TRBV7-4A0A0J9YYF1 115 aa4.99□□□□□ -1.61
LRRC28-215ENST00000559774 OBSCN-AS1Q96MR7 158 aa4.99□□□□□ -1.61
LRRC28-215ENST00000559774 DSCR8Q96T75 97 aa4.99□□□□□ -1.61
LRRC28-215ENST00000559774 A0A1B0GW54 56 aa4.98□□□□□ -1.61
LRRC28-215ENST00000559774 F8W1H4 67 aa4.98□□□□□ -1.61
LRRC28-215ENST00000559774 HERC1Q15751 4861 aa4.97□□□□□ -1.61
LRRC28-215ENST00000559774 LOC110117498A0A087WWA1 95 aa4.97□□□□□ -1.61
LRRC28-215ENST00000559774 TRBV7-7A0A0K0K1E9 115 aa4.97□□□□□ -1.61
LRRC28-215ENST00000559774 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
LRRC28-215ENST00000559774 PRO0461Q9UI25 63 aa4.97□□□□□ -1.61
LRRC28-215ENST00000559774 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
LRRC28-215ENST00000559774 SS18L2Q9UHA2 77 aa4.96□□□□□ -1.62
LRRC28-215ENST00000559774 CCKP06307 115 aa4.95□□□□□ -1.62
LRRC28-215ENST00000559774 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
LRRC28-215ENST00000559774 A0A0G2JQZ4 141 aa4.94□□□□□ -1.62
LRRC28-215ENST00000559774 A0A1W2PNM2 257 aa4.94□□□□□ -1.62
LRRC28-215ENST00000559774 Q6ZQT0 140 aa4.94□□□□□ -1.62
LRRC28-215ENST00000559774 MTURNQ8N3F0 131 aa4.92□□□□□ -1.62
LRRC28-215ENST00000559774 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
LRRC28-215ENST00000559774 A0A087WSZ3 146 aa4.91□□□□□ -1.62
LRRC28-215ENST00000559774 A0A1B0GV72 72 aa4.91□□□□□ -1.62
LRRC28-215ENST00000559774 PRR4Q16378 134 aa4.9□□□□□ -1.63
LRRC28-215ENST00000559774 C1orf195Q5TG92 126 aa4.9□□□□□ -1.63
LRRC28-215ENST00000559774 IGLV7-46A0A075B6I9 117 aa4.89□□□□□ -1.63
LRRC28-215ENST00000559774 A0A1B0GV90 55 aa4.89□□□□□ -1.63
LRRC28-215ENST00000559774 XP32Q5T750 250 aa4.89□□□□□ -1.63
LRRC28-215ENST00000559774 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
LRRC28-215ENST00000559774 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
LRRC28-215ENST00000559774 VPS25Q9BRG1 176 aa4.88□□□□□ -1.63
LRRC28-215ENST00000559774 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
LRRC28-215ENST00000559774 ETDBQ3ZM63 59 aa4.87□□□□□ -1.63
LRRC28-215ENST00000559774 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
LRRC28-215ENST00000559774 J3KT08 172 aa4.85□□□□□ -1.63
LRRC28-215ENST00000559774 Q96NJ1 140 aa4.85□□□□□ -1.63
LRRC28-215ENST00000559774 NREPQ16612 68 aa4.83□□□□□ -1.64
LRRC28-215ENST00000559774 KRTAP13-3Q3SY46 172 aa4.83□□□□□ -1.64
LRRC28-215ENST00000559774 ACYP1P07311 99 aa4.82□□□□□ -1.64
LRRC28-215ENST00000559774 IGKV4-1P06312 121 aa4.81□□□□□ -1.64
LRRC28-215ENST00000559774 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
LRRC28-215ENST00000559774 UBL5Q9BZL1 73 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms