RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 C1orf64Q8NEQ6 169 aa6.91□□□□□ -1.3
CARMIL3-202ENST00000559694 KRTAP21-3Q3LHN1 58 aa6.91□□□□□ -1.3
CARMIL3-202ENST00000559694 Q6ZRX8 168 aa6.9□□□□□ -1.3
CARMIL3-202ENST00000559694 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.31
CARMIL3-202ENST00000559694 A0A1B0GW54 56 aa6.89□□□□□ -1.31
CARMIL3-202ENST00000559694 A8MUN3 132 aa6.89□□□□□ -1.31
CARMIL3-202ENST00000559694 MOBPQ13875 183 aa6.89□□□□□ -1.31
CARMIL3-202ENST00000559694 Q5XG85 94 aa6.89□□□□□ -1.31
CARMIL3-202ENST00000559694 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
CARMIL3-202ENST00000559694 ST20-AS1Q8NBB2 130 aa6.88□□□□□ -1.31
CARMIL3-202ENST00000559694 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
CARMIL3-202ENST00000559694 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
CARMIL3-202ENST00000559694 IGLV1-50A0A075B6I6 118 aa6.86□□□□□ -1.31
CARMIL3-202ENST00000559694 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
CARMIL3-202ENST00000559694 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
CARMIL3-202ENST00000559694 K7EQZ3 153 aa6.86□□□□□ -1.31
CARMIL3-202ENST00000559694 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
CARMIL3-202ENST00000559694 TLX1NBP0CAT3 122 aa6.85□□□□□ -1.31
CARMIL3-202ENST00000559694 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
CARMIL3-202ENST00000559694 CELSR1Q9NYQ6 3014 aa6.85□□□□□ -1.31
CARMIL3-202ENST00000559694 OXTP01178 125 aa6.84□□□□□ -1.32
CARMIL3-202ENST00000559694 KCNQ1DNQ9H478 68 aa6.84□□□□□ -1.32
CARMIL3-202ENST00000559694 SPACA4Q8TDM5 124 aa6.83□□□□□ -1.32
CARMIL3-202ENST00000559694 TENM1Q9UKZ4 2725 aa6.83□□□□□ -1.32
CARMIL3-202ENST00000559694 SPAG11AQ6PDA7 123 aa6.83□□□□□ -1.32
CARMIL3-202ENST00000559694 TYMSOSQ8TAI1 123 aa6.83□□□□□ -1.32
CARMIL3-202ENST00000559694 ZFHX3Q15911 3703 aa6.82□□□□□ -1.32
CARMIL3-202ENST00000559694 TRAV22A0A0B4J277 110 aa6.82□□□□□ -1.32
CARMIL3-202ENST00000559694 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
CARMIL3-202ENST00000559694 Q8N377 158 aa6.8□□□□□ -1.32
CARMIL3-202ENST00000559694 PSORS1C2Q9UIG4 136 aa6.8□□□□□ -1.32
CARMIL3-202ENST00000559694 LCE6AA0A183 80 aa6.8□□□□□ -1.32
CARMIL3-202ENST00000559694 ZNF861PO60384 105 aa6.8□□□□□ -1.32
CARMIL3-202ENST00000559694 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
CARMIL3-202ENST00000559694 H3BPC8 53 aa6.79□□□□□ -1.32
CARMIL3-202ENST00000559694 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
CARMIL3-202ENST00000559694 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
CARMIL3-202ENST00000559694 FBN1P35555 2871 aaKnown RBP6.78□□□□□ -1.32
CARMIL3-202ENST00000559694 J3QL48 77 aa6.77□□□□□ -1.32
CARMIL3-202ENST00000559694 OCR1Q9BZK8 76 aa6.77□□□□□ -1.32
CARMIL3-202ENST00000559694 ANAPC11Q9NYG5 84 aa6.77□□□□□ -1.33
CARMIL3-202ENST00000559694 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
CARMIL3-202ENST00000559694 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
CARMIL3-202ENST00000559694 A0A1W2PNM2 257 aa6.74□□□□□ -1.33
CARMIL3-202ENST00000559694 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
CARMIL3-202ENST00000559694 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
CARMIL3-202ENST00000559694 COA5Q86WW8 74 aa6.73□□□□□ -1.33
CARMIL3-202ENST00000559694 CD164Q04900 197 aa6.73□□□□□ -1.33
CARMIL3-202ENST00000559694 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
CARMIL3-202ENST00000559694 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
CARMIL3-202ENST00000559694 RETNLBQ9BQ08 111 aa6.72□□□□□ -1.33
CARMIL3-202ENST00000559694 Q8NDZ9 215 aa6.72□□□□□ -1.33
CARMIL3-202ENST00000559694 IGFL1Q6UW32 110 aa6.71□□□□□ -1.33
CARMIL3-202ENST00000559694 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.34
CARMIL3-202ENST00000559694 PRR15Q8IV56 129 aa6.71□□□□□ -1.34
CARMIL3-202ENST00000559694 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
CARMIL3-202ENST00000559694 A8MWP4 228 aa6.7□□□□□ -1.34
CARMIL3-202ENST00000559694 CSMD1Q96PZ7 3565 aa6.7□□□□□ -1.34
CARMIL3-202ENST00000559694 VWFP04275 2813 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 IGLV5-48A0A075B6I7 105 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 SVEP1Q4LDE5 3571 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 K7ERS5 55 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 KRTAP10-2P60368 255 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 Q6ZR54 194 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 TENM3Q9P273 2699 aa6.69□□□□□ -1.34
CARMIL3-202ENST00000559694 Q1T7F1 81 aa6.68□□□□□ -1.34
CARMIL3-202ENST00000559694 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
CARMIL3-202ENST00000559694 A0A1B0GU69 56 aa6.68□□□□□ -1.34
CARMIL3-202ENST00000559694 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
CARMIL3-202ENST00000559694 DMBT1Q9UGM3 2413 aaPredicted RBP6.67□□□□□ -1.34
CARMIL3-202ENST00000559694 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
CARMIL3-202ENST00000559694 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
CARMIL3-202ENST00000559694 SPINK1P00995 79 aa6.67□□□□□ -1.34
CARMIL3-202ENST00000559694 ACYP2P14621 99 aa6.66□□□□□ -1.34
CARMIL3-202ENST00000559694 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.34
CARMIL3-202ENST00000559694 SPRR4Q96PI1 79 aa6.65□□□□□ -1.34
CARMIL3-202ENST00000559694 KRTAP10-1P60331 282 aa6.64□□□□□ -1.35
CARMIL3-202ENST00000559694 DSCR10P59022 87 aa6.64□□□□□ -1.35
CARMIL3-202ENST00000559694 PLAC8Q9NZF1 115 aa6.64□□□□□ -1.35
CARMIL3-202ENST00000559694 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
CARMIL3-202ENST00000559694 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
CARMIL3-202ENST00000559694 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
CARMIL3-202ENST00000559694 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
CARMIL3-202ENST00000559694 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
CARMIL3-202ENST00000559694 C7orf65Q6ZTY9 151 aa6.6□□□□□ -1.35
CARMIL3-202ENST00000559694 CUBNO60494 3623 aa6.59□□□□□ -1.35
CARMIL3-202ENST00000559694 TGP01266 2768 aa6.59□□□□□ -1.36
CARMIL3-202ENST00000559694 LINC00313P59037 77 aa6.58□□□□□ -1.36
CARMIL3-202ENST00000559694 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
CARMIL3-202ENST00000559694 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
CARMIL3-202ENST00000559694 PANO1I0J062 215 aa6.57□□□□□ -1.36
CARMIL3-202ENST00000559694 IGLV8-61A0A075B6I0 122 aa6.57□□□□□ -1.36
CARMIL3-202ENST00000559694 C8orf17Q9NRJ1 99 aa6.57□□□□□ -1.36
CARMIL3-202ENST00000559694 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
CARMIL3-202ENST00000559694 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
CARMIL3-202ENST00000559694 Q96NJ1 140 aa6.56□□□□□ -1.36
CARMIL3-202ENST00000559694 Q6ZRN7 208 aaPredicted RBP6.56□□□□□ -1.36
CARMIL3-202ENST00000559694 LCA10Q71F78 164 aa6.54□□□□□ -1.36
CARMIL3-202ENST00000559694 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms