RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
TPM1-211ENST00000558314 LCE2DQ5TA82 110 aaPredicted RBP8.36□□□□□ -1.07
TPM1-211ENST00000558314 TCL1BO95988 128 aa8.35□□□□□ -1.07
TPM1-211ENST00000558314 MT1HP80294 61 aa8.35□□□□□ -1.07
TPM1-211ENST00000558314 VAMP3Q15836 100 aa8.35□□□□□ -1.07
TPM1-211ENST00000558314 KRTAP19-2Q3LHN2 52 aa8.35□□□□□ -1.07
TPM1-211ENST00000558314 Q5XG85 94 aa8.34□□□□□ -1.07
TPM1-211ENST00000558314 PYY3Q5JQD4 70 aa8.32□□□□□ -1.08
TPM1-211ENST00000558314 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
TPM1-211ENST00000558314 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
TPM1-211ENST00000558314 M0R2T5 61 aa8.31□□□□□ -1.08
TPM1-211ENST00000558314 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
TPM1-211ENST00000558314 C14orf144Q96I85 54 aa8.31□□□□□ -1.08
TPM1-211ENST00000558314 FSIP2Q5CZC0 6907 aa8.3□□□□□ -1.08
TPM1-211ENST00000558314 Q6ZQY7 126 aa8.3□□□□□ -1.08
TPM1-211ENST00000558314 HIGD1BQ9P298 99 aa8.3□□□□□ -1.08
TPM1-211ENST00000558314 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
TPM1-211ENST00000558314 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
TPM1-211ENST00000558314 LINC00575Q6W349 94 aa8.29□□□□□ -1.08
TPM1-211ENST00000558314 C12orf57Q99622 126 aa8.28□□□□□ -1.08
TPM1-211ENST00000558314 CRCT1Q9UGL9 99 aa8.28□□□□□ -1.08
TPM1-211ENST00000558314 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
TPM1-211ENST00000558314 A6NJY4 79 aa8.24□□□□□ -1.09
TPM1-211ENST00000558314 Q6JHZ5 121 aa8.24□□□□□ -1.09
TPM1-211ENST00000558314 IGFL1Q6UW32 110 aa8.24□□□□□ -1.09
TPM1-211ENST00000558314 CLEC2BQ92478 149 aa8.24□□□□□ -1.09
TPM1-211ENST00000558314 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
TPM1-211ENST00000558314 OCIAD2Q56VL3 154 aa8.23□□□□□ -1.09
TPM1-211ENST00000558314 SNHG12Q9BXW3 62 aa8.23□□□□□ -1.09
TPM1-211ENST00000558314 UQCR10Q9UDW1 63 aa8.23□□□□□ -1.09
TPM1-211ENST00000558314 SMIM6P0DI80 62 aa8.22□□□□□ -1.09
TPM1-211ENST00000558314 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
TPM1-211ENST00000558314 Q6Q795 121 aa8.22□□□□□ -1.09
TPM1-211ENST00000558314 OBSCN-AS1Q96MR7 158 aa8.22□□□□□ -1.09
TPM1-211ENST00000558314 H3BUT2 72 aa8.21□□□□□ -1.1
TPM1-211ENST00000558314 C2orf91Q6ZV80 131 aa8.21□□□□□ -1.1
TPM1-211ENST00000558314 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
TPM1-211ENST00000558314 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
TPM1-211ENST00000558314 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
TPM1-211ENST00000558314 HSD52Q0P140 79 aa8.18□□□□□ -1.1
TPM1-211ENST00000558314 BVES-AS1Q5T3Y7 98 aa8.18□□□□□ -1.1
TPM1-211ENST00000558314 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
TPM1-211ENST00000558314 CEND1Q8N111 149 aa8.18□□□□□ -1.1
TPM1-211ENST00000558314 A0A0B4J2C4 111 aa8.17□□□□□ -1.1
TPM1-211ENST00000558314 LST1O00453 97 aa8.16□□□□□ -1.1
TPM1-211ENST00000558314 CFC1P0CG37 223 aa8.14□□□□□ -1.11
TPM1-211ENST00000558314 Q96NJ1 140 aa8.14□□□□□ -1.11
TPM1-211ENST00000558314 SNCGO76070 127 aa8.13□□□□□ -1.11
TPM1-211ENST00000558314 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
TPM1-211ENST00000558314 PRO1854Q9UHT4 67 aa8.12□□□□□ -1.11
TPM1-211ENST00000558314 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
TPM1-211ENST00000558314 FXYD2P54710 66 aa8.1□□□□□ -1.11
TPM1-211ENST00000558314 Q75L30 129 aa8.1□□□□□ -1.11
TPM1-211ENST00000558314 LOC105371267A0A1B0GV96 52 aa8.09□□□□□ -1.11
TPM1-211ENST00000558314 SS18L2Q9UHA2 77 aa8.09□□□□□ -1.11
TPM1-211ENST00000558314 H0YGX0 51 aa8.08□□□□□ -1.12
TPM1-211ENST00000558314 M0R143 59 aa8.07□□□□□ -1.12
TPM1-211ENST00000558314 A0A087WSZ3 146 aa8.06□□□□□ -1.12
TPM1-211ENST00000558314 FABP2P12104 132 aa8.06□□□□□ -1.12
TPM1-211ENST00000558314 NDUFV3P56181 108 aaKnown RBP8.06□□□□□ -1.12
TPM1-211ENST00000558314 FAM218AQ96MZ4 157 aa8.06□□□□□ -1.12
TPM1-211ENST00000558314 FLGP20930 4061 aaPredicted RBP8.05□□□□□ -1.12
TPM1-211ENST00000558314 GHRHP01286 108 aa8.04□□□□□ -1.12
TPM1-211ENST00000558314 COX6CP09669 75 aa8.04□□□□□ -1.12
TPM1-211ENST00000558314 TEN1Q86WV5 123 aa8.04□□□□□ -1.12
TPM1-211ENST00000558314 H3BMG7 143 aa8.03□□□□□ -1.12
TPM1-211ENST00000558314 A0A1B0GV72 72 aa8.02□□□□□ -1.13
TPM1-211ENST00000558314 A0A1B0GX51 115 aa8.02□□□□□ -1.13
TPM1-211ENST00000558314 PSMB2P49721 201 aa8.02□□□□□ -1.13
TPM1-211ENST00000558314 DSCR10P59022 87 aa8.02□□□□□ -1.13
TPM1-211ENST00000558314 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
TPM1-211ENST00000558314 K7ERJ3 54 aa8□□□□□ -1.13
TPM1-211ENST00000558314 TRBV20-1A0A075B6N2 111 aa7.99□□□□□ -1.13
TPM1-211ENST00000558314 C20orf166-AS1Q96NR2 134 aa7.99□□□□□ -1.13
TPM1-211ENST00000558314 TRIAP1O43715 76 aa7.98□□□□□ -1.13
TPM1-211ENST00000558314 A8MUU9 505 aa7.97□□□□□ -1.13
TPM1-211ENST00000558314 DNAL4O96015 105 aa7.96□□□□□ -1.14
TPM1-211ENST00000558314 H3BQ85 93 aa7.95□□□□□ -1.14
TPM1-211ENST00000558314 A0A1W2PNM2 257 aa7.94□□□□□ -1.14
TPM1-211ENST00000558314 SCGB1C2P0DMR2 95 aa7.94□□□□□ -1.14
TPM1-211ENST00000558314 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
TPM1-211ENST00000558314 IGKV4-1P06312 121 aa7.93□□□□□ -1.14
TPM1-211ENST00000558314 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
TPM1-211ENST00000558314 ANKRD29Q8N6D5 301 aa7.93□□□□□ -1.14
TPM1-211ENST00000558314 LINC00313P59037 77 aa7.92□□□□□ -1.14
TPM1-211ENST00000558314 DEFB116Q30KQ4 102 aa7.91□□□□□ -1.14
TPM1-211ENST00000558314 LYRM7Q5U5X0 104 aa7.91□□□□□ -1.14
TPM1-211ENST00000558314 BATFQ16520 125 aa7.89□□□□□ -1.15
TPM1-211ENST00000558314 ORMDL1Q9P0S3 153 aa7.89□□□□□ -1.15
TPM1-211ENST00000558314 TRACP01848 142 aa7.87□□□□□ -1.15
TPM1-211ENST00000558314 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
TPM1-211ENST00000558314 TMEM256-PLSCR3K7ERE1 68 aa7.86□□□□□ -1.15
TPM1-211ENST00000558314 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
TPM1-211ENST00000558314 VPS25Q9BRG1 176 aa7.86□□□□□ -1.15
TPM1-211ENST00000558314 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
TPM1-211ENST00000558314 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
TPM1-211ENST00000558314 CCKP06307 115 aa7.85□□□□□ -1.15
TPM1-211ENST00000558314 ATXN8Q156A1 80 aa7.84□□□□□ -1.15
TPM1-211ENST00000558314 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
TPM1-211ENST00000558314 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms