RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
TPM1-209ENST00000558072 C21orf62-AS1Q17RA5 79 aa7.5□□□□□ -1.21
TPM1-209ENST00000558072 LINC00483Q53H64 154 aa7.5□□□□□ -1.21
TPM1-209ENST00000558072 GAGE2AQ6NT46 116 aa7.5□□□□□ -1.21
TPM1-209ENST00000558072 A0A1B0GV90 55 aa7.49□□□□□ -1.21
TPM1-209ENST00000558072 ANKRD29Q8N6D5 301 aa7.49□□□□□ -1.21
TPM1-209ENST00000558072 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
TPM1-209ENST00000558072 Q8N377 158 aa7.48□□□□□ -1.21
TPM1-209ENST00000558072 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
TPM1-209ENST00000558072 LINC01600Q96MT4 127 aa7.48□□□□□ -1.21
TPM1-209ENST00000558072 CRYGAP11844 174 aa7.46□□□□□ -1.22
TPM1-209ENST00000558072 NDUFV3P56181 108 aaKnown RBP7.46□□□□□ -1.22
TPM1-209ENST00000558072 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.22
TPM1-209ENST00000558072 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.22
TPM1-209ENST00000558072 PDE6GP18545 87 aa7.44□□□□□ -1.22
TPM1-209ENST00000558072 Q6JHZ5 121 aa7.44□□□□□ -1.22
TPM1-209ENST00000558072 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
TPM1-209ENST00000558072 RBM3P98179 157 aaKnown RBP7.42□□□□□ -1.22
TPM1-209ENST00000558072 DSCR8Q96T75 97 aa7.42□□□□□ -1.22
TPM1-209ENST00000558072 IGLV8-61A0A075B6I0 122 aa7.41□□□□□ -1.22
TPM1-209ENST00000558072 Q8NBF4 154 aa7.41□□□□□ -1.22
TPM1-209ENST00000558072 PRO0461Q9UI25 63 aa7.41□□□□□ -1.22
TPM1-209ENST00000558072 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
TPM1-209ENST00000558072 C9orf153Q5TBE3 101 aa7.4□□□□□ -1.22
TPM1-209ENST00000558072 SMIM29Q86T20 159 aa7.4□□□□□ -1.22
TPM1-209ENST00000558072 TEN1Q86WV5 123 aa7.39□□□□□ -1.23
TPM1-209ENST00000558072 IGLV9-49A0A0B4J1Y8 123 aa7.38□□□□□ -1.23
TPM1-209ENST00000558072 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
TPM1-209ENST00000558072 OXTP01178 125 aa7.37□□□□□ -1.23
TPM1-209ENST00000558072 TYMSOSQ8TAI1 123 aa7.37□□□□□ -1.23
TPM1-209ENST00000558072 OBSCN-AS1Q96MR7 158 aa7.37□□□□□ -1.23
TPM1-209ENST00000558072 ANAPC11Q9NYG5 84 aa7.37□□□□□ -1.23
TPM1-209ENST00000558072 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
TPM1-209ENST00000558072 A0A1B0GW54 56 aa7.36□□□□□ -1.23
TPM1-209ENST00000558072 SMCPP49901 116 aaPredicted RBP7.36□□□□□ -1.23
TPM1-209ENST00000558072 MOBPQ13875 183 aa7.36□□□□□ -1.23
TPM1-209ENST00000558072 C4orf48Q5BLP8 95 aa7.36□□□□□ -1.23
TPM1-209ENST00000558072 C3orf22Q8N5N4 141 aa7.36□□□□□ -1.23
TPM1-209ENST00000558072 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
TPM1-209ENST00000558072 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
TPM1-209ENST00000558072 CD164Q04900 197 aa7.34□□□□□ -1.23
TPM1-209ENST00000558072 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
TPM1-209ENST00000558072 A0A087X002 238 aa7.33□□□□□ -1.24
TPM1-209ENST00000558072 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
TPM1-209ENST00000558072 J3QR89 54 aa7.32□□□□□ -1.24
TPM1-209ENST00000558072 Q6Q795 121 aa7.32□□□□□ -1.24
TPM1-209ENST00000558072 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
TPM1-209ENST00000558072 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
TPM1-209ENST00000558072 PCLOQ9Y6V0 5065 aa7.31□□□□□ -1.24
TPM1-209ENST00000558072 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
TPM1-209ENST00000558072 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
TPM1-209ENST00000558072 C14orf132Q9NPU4 83 aa7.3□□□□□ -1.24
TPM1-209ENST00000558072 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
TPM1-209ENST00000558072 FLG2Q5D862 2391 aaPredicted RBP7.3□□□□□ -1.24
TPM1-209ENST00000558072 SPINK1P00995 79 aa7.29□□□□□ -1.24
TPM1-209ENST00000558072 CCKP06307 115 aa7.29□□□□□ -1.24
TPM1-209ENST00000558072 Q6ZQT0 140 aa7.29□□□□□ -1.24
TPM1-209ENST00000558072 A0A1B0GV72 72 aa7.28□□□□□ -1.24
TPM1-209ENST00000558072 KRTAP29-1A8MX34 341 aaPredicted RBP7.28□□□□□ -1.24
TPM1-209ENST00000558072 RPS29P62273 56 aaKnown RBP7.28□□□□□ -1.24
TPM1-209ENST00000558072 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
TPM1-209ENST00000558072 SS18L2Q9UHA2 77 aa7.28□□□□□ -1.24
TPM1-209ENST00000558072 ACYP1P07311 99 aa7.27□□□□□ -1.25
TPM1-209ENST00000558072 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
TPM1-209ENST00000558072 LIMD2Q9BT23 127 aa7.27□□□□□ -1.25
TPM1-209ENST00000558072 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
TPM1-209ENST00000558072 MYCBP2O75592 4640 aa7.26□□□□□ -1.25
TPM1-209ENST00000558072 TRBV7-7A0A0K0K1E9 115 aa7.24□□□□□ -1.25
TPM1-209ENST00000558072 FAM240AA0A1B0GVK7 77 aa7.23□□□□□ -1.25
TPM1-209ENST00000558072 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
TPM1-209ENST00000558072 MT1HL1P0DM35 61 aa7.23□□□□□ -1.25
TPM1-209ENST00000558072 Q5XG85 94 aa7.23□□□□□ -1.25
TPM1-209ENST00000558072 J3QL48 77 aa7.21□□□□□ -1.26
TPM1-209ENST00000558072 K7ERU9 68 aa7.21□□□□□ -1.26
TPM1-209ENST00000558072 HRCT1Q6UXD1 115 aa7.2□□□□□ -1.26
TPM1-209ENST00000558072 A0A087WSZ3 146 aa7.19□□□□□ -1.26
TPM1-209ENST00000558072 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
TPM1-209ENST00000558072 UBL5Q9BZL1 73 aa7.19□□□□□ -1.26
TPM1-209ENST00000558072 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
TPM1-209ENST00000558072 TNXBP22105 4242 aa7.18□□□□□ -1.26
TPM1-209ENST00000558072 NREPQ16612 68 aa7.17□□□□□ -1.26
TPM1-209ENST00000558072 J3KT08 172 aa7.15□□□□□ -1.26
TPM1-209ENST00000558072 LINC00846Q9NV44 126 aa7.11□□□□□ -1.27
TPM1-209ENST00000558072 Q6ZVQ6 151 aa7.1□□□□□ -1.27
TPM1-209ENST00000558072 FP248Q71RG6 208 aaPredicted RBP7.1□□□□□ -1.27
TPM1-209ENST00000558072 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
TPM1-209ENST00000558072 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
TPM1-209ENST00000558072 BPY2O14599 106 aa7.08□□□□□ -1.28
TPM1-209ENST00000558072 NDUFB1O75438 58 aa7.08□□□□□ -1.28
TPM1-209ENST00000558072 SIGMAR1Q99720 223 aa7.08□□□□□ -1.28
TPM1-209ENST00000558072 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
TPM1-209ENST00000558072 LINC00643Q86TS7 51 aa7.07□□□□□ -1.28
TPM1-209ENST00000558072 CXCL6P80162 114 aa7.06□□□□□ -1.28
TPM1-209ENST00000558072 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
TPM1-209ENST00000558072 IGKV4-1P06312 121 aa7.05□□□□□ -1.28
TPM1-209ENST00000558072 Q96NJ1 140 aa7.02□□□□□ -1.29
TPM1-209ENST00000558072 RETNLBQ9BQ08 111 aa7.02□□□□□ -1.29
TPM1-209ENST00000558072 A8MWP4 228 aa7.01□□□□□ -1.29
TPM1-209ENST00000558072 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
TPM1-209ENST00000558072 HERC1Q15751 4861 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms