RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
SNX1-203ENST00000558040 F8WEM9 126 aa10.12□□□□□ -0.79
SNX1-203ENST00000558040 RYR1P21817 5038 aa10.11□□□□□ -0.79
SNX1-203ENST00000558040 VPS13BQ7Z7G8 4022 aa10.11□□□□□ -0.79
SNX1-203ENST00000558040 HSPG2P98160 4391 aa10.1□□□□□ -0.79
SNX1-203ENST00000558040 SMIM29Q86T20 159 aa10.1□□□□□ -0.79
SNX1-203ENST00000558040 C3orf22Q8N5N4 141 aa10.1□□□□□ -0.79
SNX1-203ENST00000558040 JMJD7-PLA2G4BH0Y9G9 81 aa10.09□□□□□ -0.79
SNX1-203ENST00000558040 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
SNX1-203ENST00000558040 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
SNX1-203ENST00000558040 TEN1Q86WV5 123 aa10.07□□□□□ -0.8
SNX1-203ENST00000558040 ANAPC11Q9NYG5 84 aa10.07□□□□□ -0.8
SNX1-203ENST00000558040 KIAA1109Q2LD37 5005 aa10.05□□□□□ -0.8
SNX1-203ENST00000558040 RBM3P98179 157 aaKnown RBP10.05□□□□□ -0.8
SNX1-203ENST00000558040 ETDBQ3ZM63 59 aa10.05□□□□□ -0.8
SNX1-203ENST00000558040 KRTAP17-1Q9BYP8 105 aa10.05□□□□□ -0.8
SNX1-203ENST00000558040 IGLV9-49A0A0B4J1Y8 123 aa10.04□□□□□ -0.8
SNX1-203ENST00000558040 A0A1B0GV72 72 aa10.04□□□□□ -0.8
SNX1-203ENST00000558040 CRYGAP11844 174 aa10.04□□□□□ -0.8
SNX1-203ENST00000558040 C9orf153Q5TBE3 101 aa10.04□□□□□ -0.8
SNX1-203ENST00000558040 OBSCN-AS1Q96MR7 158 aa10.04□□□□□ -0.8
SNX1-203ENST00000558040 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
SNX1-203ENST00000558040 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
SNX1-203ENST00000558040 Q8NBF4 154 aa10.02□□□□□ -0.81
SNX1-203ENST00000558040 FAT1Q14517 4588 aa10.02□□□□□ -0.81
SNX1-203ENST00000558040 MOBPQ13875 183 aa10.01□□□□□ -0.81
SNX1-203ENST00000558040 Q6JHZ5 121 aa10.01□□□□□ -0.81
SNX1-203ENST00000558040 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
SNX1-203ENST00000558040 A0A087X002 238 aa10□□□□□ -0.81
SNX1-203ENST00000558040 PDE6GP18545 87 aa9.99□□□□□ -0.81
SNX1-203ENST00000558040 C14orf132Q9NPU4 83 aa9.99□□□□□ -0.81
SNX1-203ENST00000558040 TRBV7-4A0A0J9YYF1 115 aa9.98□□□□□ -0.81
SNX1-203ENST00000558040 C21orf62-AS1Q17RA5 79 aa9.98□□□□□ -0.81
SNX1-203ENST00000558040 LOC110117498A0A087WWA1 95 aa9.97□□□□□ -0.81
SNX1-203ENST00000558040 SSBP3-AS1Q7Z2R9 100 aa9.97□□□□□ -0.81
SNX1-203ENST00000558040 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
SNX1-203ENST00000558040 KRTAP13-2Q52LG2 175 aa9.96□□□□□ -0.82
SNX1-203ENST00000558040 IGFL1Q6UW32 110 aa9.96□□□□□ -0.82
SNX1-203ENST00000558040 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
SNX1-203ENST00000558040 TYMSOSQ8TAI1 123 aa9.95□□□□□ -0.82
SNX1-203ENST00000558040 Q6ZQT0 140 aa9.93□□□□□ -0.82
SNX1-203ENST00000558040 PKHD1L1Q86WI1 4243 aa9.92□□□□□ -0.82
SNX1-203ENST00000558040 CCKP06307 115 aa9.91□□□□□ -0.82
SNX1-203ENST00000558040 VPS25Q9BRG1 176 aa9.9□□□□□ -0.82
SNX1-203ENST00000558040 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.82
SNX1-203ENST00000558040 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
SNX1-203ENST00000558040 J3QR89 54 aa9.88□□□□□ -0.83
SNX1-203ENST00000558040 Q6Q795 121 aa9.88□□□□□ -0.83
SNX1-203ENST00000558040 A0A1W2PNM2 257 aa9.87□□□□□ -0.83
SNX1-203ENST00000558040 CD164Q04900 197 aa9.87□□□□□ -0.83
SNX1-203ENST00000558040 A0A1B0GW54 56 aa9.86□□□□□ -0.83
SNX1-203ENST00000558040 OXTP01178 125 aa9.86□□□□□ -0.83
SNX1-203ENST00000558040 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
SNX1-203ENST00000558040 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
SNX1-203ENST00000558040 HRCT1Q6UXD1 115 aa9.83□□□□□ -0.84
SNX1-203ENST00000558040 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
SNX1-203ENST00000558040 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
SNX1-203ENST00000558040 FAM240AA0A1B0GVK7 77 aa9.81□□□□□ -0.84
SNX1-203ENST00000558040 ACYP1P07311 99 aa9.81□□□□□ -0.84
SNX1-203ENST00000558040 KRTAP10-8P60410 259 aa9.81□□□□□ -0.84
SNX1-203ENST00000558040 K7ERU9 68 aa9.8□□□□□ -0.84
SNX1-203ENST00000558040 HERC2O95714 4834 aa9.8□□□□□ -0.84
SNX1-203ENST00000558040 SPINK1P00995 79 aa9.79□□□□□ -0.84
SNX1-203ENST00000558040 A0A087WSZ3 146 aa9.78□□□□□ -0.84
SNX1-203ENST00000558040 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.85
SNX1-203ENST00000558040 LIMD2Q9BT23 127 aa9.77□□□□□ -0.85
SNX1-203ENST00000558040 SS18L2Q9UHA2 77 aa9.77□□□□□ -0.85
SNX1-203ENST00000558040 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
SNX1-203ENST00000558040 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
SNX1-203ENST00000558040 MT1HL1P0DM35 61 aa9.74□□□□□ -0.85
SNX1-203ENST00000558040 Q5XG85 94 aa9.73□□□□□ -0.85
SNX1-203ENST00000558040 UBL5Q9BZL1 73 aa9.73□□□□□ -0.85
SNX1-203ENST00000558040 LINC00846Q9NV44 126 aa9.73□□□□□ -0.85
SNX1-203ENST00000558040 NREPQ16612 68 aa9.71□□□□□ -0.86
SNX1-203ENST00000558040 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
SNX1-203ENST00000558040 Q6ZVQ6 151 aa9.68□□□□□ -0.86
SNX1-203ENST00000558040 J3QL48 77 aa9.67□□□□□ -0.86
SNX1-203ENST00000558040 FAT3Q8TDW7 4589 aa9.64□□□□□ -0.87
SNX1-203ENST00000558040 LRP1Q07954 4544 aaKnown RBP9.63□□□□□ -0.87
SNX1-203ENST00000558040 LINC00472Q9H8W2 130 aa9.62□□□□□ -0.87
SNX1-203ENST00000558040 ABCA13Q86UQ4 5058 aa9.61□□□□□ -0.87
SNX1-203ENST00000558040 J3KT08 172 aa9.6□□□□□ -0.87
SNX1-203ENST00000558040 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
SNX1-203ENST00000558040 Q96NJ1 140 aa9.6□□□□□ -0.87
SNX1-203ENST00000558040 TNXBP22105 4242 aa9.6□□□□□ -0.87
SNX1-203ENST00000558040 BPY2O14599 106 aa9.59□□□□□ -0.87
SNX1-203ENST00000558040 C1orf195Q5TG92 126 aa9.59□□□□□ -0.87
SNX1-203ENST00000558040 ATP5EP2Q5VTU8 51 aa9.59□□□□□ -0.87
SNX1-203ENST00000558040 SIGMAR1Q99720 223 aa9.59□□□□□ -0.87
SNX1-203ENST00000558040 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
SNX1-203ENST00000558040 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
SNX1-203ENST00000558040 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
SNX1-203ENST00000558040 DEFB116Q30KQ4 102 aa9.57□□□□□ -0.88
SNX1-203ENST00000558040 CXCL6P80162 114 aa9.55□□□□□ -0.88
SNX1-203ENST00000558040 RETNLBQ9BQ08 111 aa9.52□□□□□ -0.89
SNX1-203ENST00000558040 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
SNX1-203ENST00000558040 NDUFB1O75438 58 aa9.51□□□□□ -0.89
SNX1-203ENST00000558040 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
SNX1-203ENST00000558040 A8MWP4 228 aa9.5□□□□□ -0.89
SNX1-203ENST00000558040 FP248Q71RG6 208 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms