RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
LDLR-207ENST00000558013 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
LDLR-207ENST00000558013 C16orf90A8MZG2 172 aa8.08□□□□□ -1.12
LDLR-207ENST00000558013 UBE2DNLQ8IWF7 75 aa8.06□□□□□ -1.12
LDLR-207ENST00000558013 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
LDLR-207ENST00000558013 A0A087WSZ3 146 aa8.05□□□□□ -1.12
LDLR-207ENST00000558013 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
LDLR-207ENST00000558013 PANO1I0J062 215 aa8.05□□□□□ -1.12
LDLR-207ENST00000558013 FAM229BQ4G0N7 80 aa8.04□□□□□ -1.12
LDLR-207ENST00000558013 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
LDLR-207ENST00000558013 NDUFC1O43677 76 aa8.03□□□□□ -1.12
LDLR-207ENST00000558013 APLNQ9ULZ1 77 aa8.03□□□□□ -1.12
LDLR-207ENST00000558013 WFDC13Q8IUB5 93 aa8.02□□□□□ -1.13
LDLR-207ENST00000558013 A0A1B0GW54 56 aa8.01□□□□□ -1.13
LDLR-207ENST00000558013 UBE2AP49459 152 aa8□□□□□ -1.13
LDLR-207ENST00000558013 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
LDLR-207ENST00000558013 TGP01266 2768 aa8□□□□□ -1.13
LDLR-207ENST00000558013 HCG22E2RYF7 251 aa7.98□□□□□ -1.13
LDLR-207ENST00000558013 PRR4Q16378 134 aa7.97□□□□□ -1.13
LDLR-207ENST00000558013 DYNC2H1Q8NCM8 4307 aaKnown RBP7.97□□□□□ -1.13
LDLR-207ENST00000558013 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
LDLR-207ENST00000558013 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.13
LDLR-207ENST00000558013 SMIM26A0A096LP01 95 aa7.96□□□□□ -1.14
LDLR-207ENST00000558013 MDFIQ99750 246 aa7.96□□□□□ -1.14
LDLR-207ENST00000558013 FRAS1Q86XX4 4008 aa7.96□□□□□ -1.14
LDLR-207ENST00000558013 KMT2AQ03164 3969 aa7.95□□□□□ -1.14
LDLR-207ENST00000558013 PRKDCP78527 4128 aaKnown RBP7.95□□□□□ -1.14
LDLR-207ENST00000558013 LCE6AA0A183 80 aa7.95□□□□□ -1.14
LDLR-207ENST00000558013 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
LDLR-207ENST00000558013 C9orf163Q8N9P6 203 aa7.95□□□□□ -1.14
LDLR-207ENST00000558013 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
LDLR-207ENST00000558013 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
LDLR-207ENST00000558013 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
LDLR-207ENST00000558013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
LDLR-207ENST00000558013 NBDYA0A0U1RRE5 68 aa7.92□□□□□ -1.14
LDLR-207ENST00000558013 ZCCHC13Q8WW36 166 aaKnown RBP7.92□□□□□ -1.14
LDLR-207ENST00000558013 HECTD4Q9Y4D8 3996 aa7.92□□□□□ -1.14
LDLR-207ENST00000558013 ATP5EP56381 51 aaPredicted RBP7.91□□□□□ -1.14
LDLR-207ENST00000558013 Q6ZRN7 208 aaPredicted RBP7.91□□□□□ -1.14
LDLR-207ENST00000558013 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
LDLR-207ENST00000558013 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
LDLR-207ENST00000558013 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
LDLR-207ENST00000558013 IGLV9-49A0A0B4J1Y8 123 aa7.88□□□□□ -1.15
LDLR-207ENST00000558013 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
LDLR-207ENST00000558013 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
LDLR-207ENST00000558013 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
LDLR-207ENST00000558013 SPRR1BP22528 89 aa7.87□□□□□ -1.15
LDLR-207ENST00000558013 B9D2Q9BPU9 175 aa7.87□□□□□ -1.15
LDLR-207ENST00000558013 ANAPC11Q9NYG5 84 aa7.87□□□□□ -1.15
LDLR-207ENST00000558013 VPS13DQ5THJ4 4388 aa7.86□□□□□ -1.15
LDLR-207ENST00000558013 H0Y9J4 135 aa7.86□□□□□ -1.15
LDLR-207ENST00000558013 LINC00208Q96KT6 92 aa7.86□□□□□ -1.15
LDLR-207ENST00000558013 KRTAP13-1Q8IUC0 172 aa7.86□□□□□ -1.15
LDLR-207ENST00000558013 CASC2Q6XLA1 102 aa7.85□□□□□ -1.15
LDLR-207ENST00000558013 PRR15Q8IV56 129 aa7.85□□□□□ -1.15
LDLR-207ENST00000558013 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
LDLR-207ENST00000558013 DNAH8Q96JB1 4490 aa7.85□□□□□ -1.15
LDLR-207ENST00000558013 A8MWP4 228 aa7.83□□□□□ -1.16
LDLR-207ENST00000558013 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
LDLR-207ENST00000558013 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
LDLR-207ENST00000558013 DNAH17Q9UFH2 4485 aa7.81□□□□□ -1.16
LDLR-207ENST00000558013 H0Y9P7 68 aa7.8□□□□□ -1.16
LDLR-207ENST00000558013 MP68P56378 58 aa7.8□□□□□ -1.16
LDLR-207ENST00000558013 BRK1Q8WUW1 75 aa7.79□□□□□ -1.16
LDLR-207ENST00000558013 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
LDLR-207ENST00000558013 A0A087WTM6 91 aa7.79□□□□□ -1.16
LDLR-207ENST00000558013 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
LDLR-207ENST00000558013 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
LDLR-207ENST00000558013 MOBPQ13875 183 aa7.78□□□□□ -1.16
LDLR-207ENST00000558013 DNAH6Q9C0G6 4158 aa7.78□□□□□ -1.16
LDLR-207ENST00000558013 Q96NJ1 140 aa7.78□□□□□ -1.16
LDLR-207ENST00000558013 PSORS1C2Q9UIG4 136 aa7.78□□□□□ -1.16
LDLR-207ENST00000558013 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
LDLR-207ENST00000558013 RTL8CO15255 209 aa7.75□□□□□ -1.17
LDLR-207ENST00000558013 PSPHP1O15172 72 aa7.74□□□□□ -1.17
LDLR-207ENST00000558013 A0A087X002 238 aa7.73□□□□□ -1.17
LDLR-207ENST00000558013 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
LDLR-207ENST00000558013 WWC2-AS2Q96NR7 200 aa7.73□□□□□ -1.17
LDLR-207ENST00000558013 CYP4F30PQ9H0H9 118 aa7.73□□□□□ -1.17
LDLR-207ENST00000558013 IGHV6-1A0A0B4J1U7 121 aa7.72□□□□□ -1.17
LDLR-207ENST00000558013 IGLV5-52A0A0A0MRZ9 124 aa7.71□□□□□ -1.18
LDLR-207ENST00000558013 NDUFB1O75438 58 aa7.71□□□□□ -1.18
LDLR-207ENST00000558013 PCOTHQ58A44 107 aa7.7□□□□□ -1.18
LDLR-207ENST00000558013 LINC00483Q53H64 154 aa7.69□□□□□ -1.18
LDLR-207ENST00000558013 DNAH11Q96DT5 4516 aa7.69□□□□□ -1.18
LDLR-207ENST00000558013 SEC61GP60059 68 aa7.67□□□□□ -1.18
LDLR-207ENST00000558013 NDUFS5O43920 106 aa7.67□□□□□ -1.18
LDLR-207ENST00000558013 Q1T7F1 81 aa7.67□□□□□ -1.18
LDLR-207ENST00000558013 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
LDLR-207ENST00000558013 Q6ZR54 194 aa7.67□□□□□ -1.18
LDLR-207ENST00000558013 C8orf17Q9NRJ1 99 aa7.67□□□□□ -1.18
LDLR-207ENST00000558013 ZNF861PO60384 105 aa7.66□□□□□ -1.18
LDLR-207ENST00000558013 SPINK6Q6UWN8 80 aa7.66□□□□□ -1.18
LDLR-207ENST00000558013 V9GYY9 64 aa7.66□□□□□ -1.18
LDLR-207ENST00000558013 ALMS1Q8TCU4 4167 aa7.66□□□□□ -1.18
LDLR-207ENST00000558013 PLAC8Q9NZF1 115 aa7.65□□□□□ -1.18
LDLR-207ENST00000558013 A8MUN3 132 aa7.65□□□□□ -1.18
LDLR-207ENST00000558013 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
LDLR-207ENST00000558013 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
LDLR-207ENST00000558013 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms