RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 POLQO75417 2590 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 NBEAQ8NFP9 2946 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 FAM186AA6NE01 2351 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 FREM2Q5SZK8 3169 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 LRRK2Q5S007 2527 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 NCOR2Q9Y618 2525 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 SMIM27A0A1W2PRY6 76 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 PLGLAQ15195 96 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 FAM103A1Q9BTL3 118 aaKnown RBP1.13□□□□□ -2.23
TDP1-217ENST00000557782 PLAC8Q9NZF1 115 aa1.13□□□□□ -2.23
TDP1-217ENST00000557782 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 CFAP46Q8IYW2 2715 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 ATRQ13535 2644 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 FBN2P35556 2912 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 DEFB108AA8MXU0 73 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 SPINK4O60575 86 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 MRPL33O75394 65 aaKnown RBP1.12□□□□□ -2.23
TDP1-217ENST00000557782 COX6A2Q02221 97 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 RPL39P5Q59GN2 51 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 BVES-AS1Q5T3Y7 98 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 KRTAP5-4Q6L8H1 288 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 TMEM167BQ9NRX6 74 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 UBE2D4Q9Y2X8 147 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 WDFY4Q6ZS81 3184 aa1.12□□□□□ -2.23
TDP1-217ENST00000557782 PRRC2CQ9Y520 2896 aaKnown RBP1.11□□□□□ -2.23
TDP1-217ENST00000557782 PIEZO2Q9H5I5 2752 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 A0A1B0GU69 56 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 SPINK7P58062 85 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 LEAP2Q969E1 77 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 CNFNQ9BYD5 112 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 DCHS1Q96JQ0 3298 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 ZFYVE26Q68DK2 2539 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 ZZEF1O43149 2961 aa1.11□□□□□ -2.23
TDP1-217ENST00000557782 HRNRQ86YZ3 2850 aaPredicted RBP1.1□□□□□ -2.23
TDP1-217ENST00000557782 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 RIF1Q5UIP0 2472 aaKnown RBP1.1□□□□□ -2.23
TDP1-217ENST00000557782 TRBV7-4A0A0J9YYF1 115 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 COX8AP10176 69 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 WT1-ASQ06250 92 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 TMEM167AQ8TBQ9 72 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 GAFA1Q96PS6 74 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 GVINP1Q7Z2Y8 2422 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 TEX15Q9BXT5 2789 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 COL6A5A8TX70 2615 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 WDFY3Q8IZQ1 3526 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 DMXL2Q8TDJ6 3036 aa1.1□□□□□ -2.23
TDP1-217ENST00000557782 URB1O60287 2271 aaKnown RBP1.09□□□□□ -2.23
TDP1-217ENST00000557782 IGSF10Q6WRI0 2623 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 CELSR3Q9NYQ7 3312 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 MYO15AQ9UKN7 3530 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 OTOGLQ3ZCN5 2332 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 MTORP42345 2549 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 TLN1Q9Y490 2541 aaKnown RBP1.09□□□□□ -2.23
TDP1-217ENST00000557782 A0A1B0GUT8 65 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 LINC01546A6NGU7 62 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 H3BUT2 72 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 HILPDAQ9Y5L2 63 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 SPTBN2O15020 2390 aa1.09□□□□□ -2.23
TDP1-217ENST00000557782 PKDREJQ9NTG1 2253 aa1.09□□□□□ -2.24
TDP1-217ENST00000557782 SPENQ96T58 3664 aaKnown RBP1.09□□□□□ -2.24
TDP1-217ENST00000557782 STAB1Q9NY15 2570 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 UBR5O95071 2799 aaPredicted RBP1.08□□□□□ -2.24
TDP1-217ENST00000557782 AKAP13Q12802 2813 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 TACC2O95359 2948 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 FLNCQ14315 2725 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 ANKHD1Q8IWZ3 2542 aaKnown RBP1.08□□□□□ -2.24
TDP1-217ENST00000557782 APC2O95996 2303 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 K7EIM0 57 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 IFI27P40305 119 aaPredicted RBP1.08□□□□□ -2.24
TDP1-217ENST00000557782 CRIP1P50238 77 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 TP53AIP1Q9HCN2 124 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 TIMM8BQ9Y5J9 83 aaPredicted RBP1.08□□□□□ -2.24
TDP1-217ENST00000557782 DMXL1Q9Y485 3027 aa1.08□□□□□ -2.24
TDP1-217ENST00000557782 LRBAP50851 2863 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 LOC400499M0QZD8 3231 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 I3L2K1 104 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 K7EMI3 77 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 APELAP0DMC3 54 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 FCER1GP30273 86 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 DEFB108BQ8NET1 73 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 KRTAP4-4Q9BYR3 166 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 BOD1L1Q8NFC6 3051 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 ASPMQ8IZT6 3477 aa1.07□□□□□ -2.24
TDP1-217ENST00000557782 CEP295Q9C0D2 2601 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 NDUFA3O95167 84 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 SMIM13P0DJ93 91 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 COX6B1P14854 86 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
TDP1-217ENST00000557782 SMIM2Q9BVW6 85 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 KAAG1Q9UBP8 84 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 PRO0255Q9UI72 69 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 WNK2Q9Y3S1 2297 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 MGAQ8IWI9 3026 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 SPTBN1Q01082 2364 aaKnown RBP1.06□□□□□ -2.24
TDP1-217ENST00000557782 ATMQ13315 3056 aa1.06□□□□□ -2.24
TDP1-217ENST00000557782 NBEAL1Q6ZS30 2694 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 DMDP11532 3685 aa1.05□□□□□ -2.24
TDP1-217ENST00000557782 PLNP26678 52 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms