RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
GABRB3-213ENST00000557765 Q8N1X5 172 aa6.36□□□□□ -1.39
GABRB3-213ENST00000557765 DNAH5Q8TE73 4624 aa6.36□□□□□ -1.39
GABRB3-213ENST00000557765 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
GABRB3-213ENST00000557765 K7ERU9 68 aa6.35□□□□□ -1.39
GABRB3-213ENST00000557765 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
GABRB3-213ENST00000557765 Q6Q795 121 aa6.35□□□□□ -1.39
GABRB3-213ENST00000557765 CRYGAP11844 174 aa6.34□□□□□ -1.39
GABRB3-213ENST00000557765 CD164Q04900 197 aa6.34□□□□□ -1.39
GABRB3-213ENST00000557765 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
GABRB3-213ENST00000557765 Q8NBF4 154 aa6.34□□□□□ -1.39
GABRB3-213ENST00000557765 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
GABRB3-213ENST00000557765 PKHD1P08F94 4074 aa6.34□□□□□ -1.4
GABRB3-213ENST00000557765 SMIM29Q86T20 159 aa6.33□□□□□ -1.4
GABRB3-213ENST00000557765 ST20-AS1Q8NBB2 130 aa6.33□□□□□ -1.4
GABRB3-213ENST00000557765 DEFB105AQ8NG35 78 aa6.33□□□□□ -1.4
GABRB3-213ENST00000557765 RYR3Q15413 4870 aa6.33□□□□□ -1.4
GABRB3-213ENST00000557765 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
GABRB3-213ENST00000557765 Q5VSD8 79 aa6.31□□□□□ -1.4
GABRB3-213ENST00000557765 LRP1BQ9NZR2 4599 aa6.3□□□□□ -1.4
GABRB3-213ENST00000557765 SMR3BP02814 79 aaPredicted RBP6.3□□□□□ -1.4
GABRB3-213ENST00000557765 CCKP06307 115 aa6.3□□□□□ -1.4
GABRB3-213ENST00000557765 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
GABRB3-213ENST00000557765 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
GABRB3-213ENST00000557765 Q6ZQT0 140 aa6.29□□□□□ -1.4
GABRB3-213ENST00000557765 MTURNQ8N3F0 131 aa6.29□□□□□ -1.4
GABRB3-213ENST00000557765 HAMPP81172 84 aa6.28□□□□□ -1.4
GABRB3-213ENST00000557765 SS18L2Q9UHA2 77 aa6.28□□□□□ -1.4
GABRB3-213ENST00000557765 DYNC1H1Q14204 4646 aaKnown RBP6.28□□□□□ -1.4
GABRB3-213ENST00000557765 KRTAP1-4P0C5Y4 121 aa6.27□□□□□ -1.41
GABRB3-213ENST00000557765 Q5XG85 94 aa6.26□□□□□ -1.41
GABRB3-213ENST00000557765 C14orf132Q9NPU4 83 aa6.26□□□□□ -1.41
GABRB3-213ENST00000557765 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
GABRB3-213ENST00000557765 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
GABRB3-213ENST00000557765 SPINK1P00995 79 aa6.24□□□□□ -1.41
GABRB3-213ENST00000557765 OXTP01178 125 aa6.24□□□□□ -1.41
GABRB3-213ENST00000557765 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
GABRB3-213ENST00000557765 UBL5Q9BZL1 73 aa6.24□□□□□ -1.41
GABRB3-213ENST00000557765 C4orf48Q5BLP8 95 aa6.23□□□□□ -1.41
GABRB3-213ENST00000557765 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
GABRB3-213ENST00000557765 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
GABRB3-213ENST00000557765 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
GABRB3-213ENST00000557765 MOBPQ13875 183 aa6.22□□□□□ -1.41
GABRB3-213ENST00000557765 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
GABRB3-213ENST00000557765 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
GABRB3-213ENST00000557765 APOBP04114 4563 aaKnown RBP6.21□□□□□ -1.42
GABRB3-213ENST00000557765 ATP5EP2Q5VTU8 51 aa6.21□□□□□ -1.42
GABRB3-213ENST00000557765 J3KT08 172 aa6.19□□□□□ -1.42
GABRB3-213ENST00000557765 A0A087X002 238 aa6.18□□□□□ -1.42
GABRB3-213ENST00000557765 A0A1W2PNM2 257 aa6.18□□□□□ -1.42
GABRB3-213ENST00000557765 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
GABRB3-213ENST00000557765 NREPQ16612 68 aa6.17□□□□□ -1.42
GABRB3-213ENST00000557765 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
GABRB3-213ENST00000557765 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
GABRB3-213ENST00000557765 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
GABRB3-213ENST00000557765 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
GABRB3-213ENST00000557765 VPS25Q9BRG1 176 aa6.16□□□□□ -1.42
GABRB3-213ENST00000557765 CXCL6P80162 114 aa6.15□□□□□ -1.42
GABRB3-213ENST00000557765 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
GABRB3-213ENST00000557765 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
GABRB3-213ENST00000557765 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
GABRB3-213ENST00000557765 A0A087WSZ3 146 aa6.13□□□□□ -1.43
GABRB3-213ENST00000557765 PRR26Q8N8Z3 221 aa6.13□□□□□ -1.43
GABRB3-213ENST00000557765 LINC00846Q9NV44 126 aa6.13□□□□□ -1.43
GABRB3-213ENST00000557765 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
GABRB3-213ENST00000557765 Q6ZVQ6 151 aa6.12□□□□□ -1.43
GABRB3-213ENST00000557765 SIGMAR1Q99720 223 aa6.12□□□□□ -1.43
GABRB3-213ENST00000557765 A0A1B0GV72 72 aa6.11□□□□□ -1.43
GABRB3-213ENST00000557765 RYR1P21817 5038 aa6.11□□□□□ -1.43
GABRB3-213ENST00000557765 HSPG2P98160 4391 aa6.11□□□□□ -1.43
GABRB3-213ENST00000557765 BPY2O14599 106 aa6.09□□□□□ -1.43
GABRB3-213ENST00000557765 NDUFB1O75438 58 aa6.09□□□□□ -1.43
GABRB3-213ENST00000557765 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
GABRB3-213ENST00000557765 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
GABRB3-213ENST00000557765 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
GABRB3-213ENST00000557765 FP248Q71RG6 208 aaPredicted RBP6.07□□□□□ -1.44
GABRB3-213ENST00000557765 FAT1Q14517 4588 aa6.06□□□□□ -1.44
GABRB3-213ENST00000557765 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
GABRB3-213ENST00000557765 A8MWP4 228 aa6.04□□□□□ -1.44
GABRB3-213ENST00000557765 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
GABRB3-213ENST00000557765 LCE2BO14633 110 aa6.02□□□□□ -1.45
GABRB3-213ENST00000557765 HRCT1Q6UXD1 115 aa6.02□□□□□ -1.45
GABRB3-213ENST00000557765 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
GABRB3-213ENST00000557765 C1orf195Q5TG92 126 aa6.01□□□□□ -1.45
GABRB3-213ENST00000557765 Q96NJ1 140 aa6.01□□□□□ -1.45
GABRB3-213ENST00000557765 BIRC6Q9NR09 4857 aa6.01□□□□□ -1.45
GABRB3-213ENST00000557765 IGKV4-1P06312 121 aa6□□□□□ -1.45
GABRB3-213ENST00000557765 PRR15Q8IV56 129 aa6□□□□□ -1.45
GABRB3-213ENST00000557765 A0A0G2JQZ4 141 aa5.99□□□□□ -1.45
GABRB3-213ENST00000557765 J3QL48 77 aa5.99□□□□□ -1.45
GABRB3-213ENST00000557765 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
GABRB3-213ENST00000557765 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
GABRB3-213ENST00000557765 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
GABRB3-213ENST00000557765 DSCR10P59022 87 aa5.97□□□□□ -1.45
GABRB3-213ENST00000557765 SCGB1A1P11684 91 aa5.96□□□□□ -1.46
GABRB3-213ENST00000557765 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
GABRB3-213ENST00000557765 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
GABRB3-213ENST00000557765 HIST1H4AP62805 103 aaKnown RBP5.94□□□□□ -1.46
GABRB3-213ENST00000557765 IGKV3D-7A0A0C4DH55 119 aa5.93□□□□□ -1.46
GABRB3-213ENST00000557765 HERC2O95714 4834 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms