RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 LELP1Q5T871 98 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 KCNQ1DNQ9H478 68 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 HILPDAQ9Y5L2 63 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 PCNX1Q96RV3 2341 aa0.14□□□□□ -2.39
GPHN-216ENST00000557678 LMTK2Q8IWU2 1503 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 DEPDC5O75140 1603 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 PARP4Q9UKK3 1724 aaKnown RBP0.13□□□□□ -2.39
GPHN-216ENST00000557678 SYNE1Q8NF91 8797 aaKnown RBP0.13□□□□□ -2.39
GPHN-216ENST00000557678 A0A087WWC5 75 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 SMIM31A0A1B0GVY4 71 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 LYNX1G3V0Z9 82 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 K7EMI3 77 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 DEFB114Q30KQ6 69 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 S100ZQ8WXG8 99 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 CD163L1Q9NR16 1453 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 PLXNC1O60486 1568 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 ADAMTS12P58397 1594 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 WIZO95785 1651 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 NBASA2RRP1 2371 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 NBEAQ8NFP9 2946 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 LRRK2Q5S007 2527 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 SPG11Q96JI7 2443 aa0.13□□□□□ -2.39
GPHN-216ENST00000557678 CEP290O15078 2479 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 FAT4Q6V0I7 4981 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 IAPPP10997 89 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 NCBP2-AS2Q69YL0 99 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 SMIM5Q71RC9 77 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 PKD1L2Q7Z442 2459 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 IQGAP3Q86VI3 1631 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 MTORP42345 2549 aa0.12□□□□□ -2.39
GPHN-216ENST00000557678 TACC2O95359 2948 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 PDZD2O15018 2839 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 SRRM2Q9UQ35 2752 aaKnown RBP0.11□□□□□ -2.39
GPHN-216ENST00000557678 DEFB130BP0DP73 79 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 DEFB130AP0DP74 79 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 CRIP1P50238 77 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 KMT2AQ03164 3969 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 STAB1Q9NY15 2570 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 MXRA5Q9NR99 2828 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
GPHN-216ENST00000557678 ZZEF1O43149 2961 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
GPHN-216ENST00000557678 NHSQ6T4R5 1651 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 FASNP49327 2511 aaKnown RBP0.11□□□□□ -2.39
GPHN-216ENST00000557678 TNXBP22105 4242 aa0.11□□□□□ -2.39
GPHN-216ENST00000557678 GCN1Q92616 2671 aaKnown RBP0.1□□□□□ -2.39
GPHN-216ENST00000557678 SPTBN4Q9H254 2564 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 TJP1Q07157 1748 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 RNF17Q9BXT8 1623 aaKnown RBP0.1□□□□□ -2.39
GPHN-216ENST00000557678 COL6A3P12111 3177 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 LINC01549A6NIU2 74 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 H0YAA0 97 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 H3BUA1 57 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 SPRR2BP35325 72 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 MINOS1Q5TGZ0 78 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 NMES1Q9C002 83 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 TIMM8BQ9Y5J9 83 aaPredicted RBP0.1□□□□□ -2.39
GPHN-216ENST00000557678 HUWE1Q7Z6Z7 4374 aaKnown RBP0.1□□□□□ -2.39
GPHN-216ENST00000557678 DIP2AQ14689 1571 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 BPTFQ12830 3046 aa0.1□□□□□ -2.39
GPHN-216ENST00000557678 EFCAB5A4FU69 1503 aa0.09□□□□□ -2.39
GPHN-216ENST00000557678 ASXL1Q8IXJ9 1541 aa0.09□□□□□ -2.39
GPHN-216ENST00000557678 C9orf92A6NGG3 77 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 PRLHP81277 87 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 CDC42BPGQ6DT37 1551 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 NRAPQ86VF7 1730 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 DMXL1Q9Y485 3027 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 KALRNO60229 2985 aa0.09□□□□□ -2.4
GPHN-216ENST00000557678 ZC3H13Q5T200 1668 aaKnown RBP0.08□□□□□ -2.4
GPHN-216ENST00000557678 KIAA0586Q9BVV6 1533 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 ITPR3Q14573 2671 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 DNMBPQ6XZF7 1577 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 PRKDCP78527 4128 aaKnown RBP0.08□□□□□ -2.4
GPHN-216ENST00000557678 H3BNG1 76 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 FCER1GP30273 86 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 WT1-ASQ06250 92 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 C6orf48Q9UBA6 75 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 ABCC6O95255 1503 aa0.08□□□□□ -2.4
GPHN-216ENST00000557678 MYCBP2O75592 4640 aa0.07□□□□□ -2.4
GPHN-216ENST00000557678 INO80Q9ULG1 1556 aaPredicted RBP0.07□□□□□ -2.4
GPHN-216ENST00000557678 RIF1Q5UIP0 2472 aaKnown RBP0.07□□□□□ -2.4
GPHN-216ENST00000557678 ANKHD1Q8IWZ3 2542 aaKnown RBP0.07□□□□□ -2.4
GPHN-216ENST00000557678 SFTA3P0C7M3 94 aa0.07□□□□□ -2.4
GPHN-216ENST00000557678 TMEM167BQ9NRX6 74 aa0.07□□□□□ -2.4
GPHN-216ENST00000557678 ABRACLQ9P1F3 81 aa0.07□□□□□ -2.4
GPHN-216ENST00000557678 TEP1Q99973 2627 aaKnown RBP0.07□□□□□ -2.4
GPHN-216ENST00000557678 ABCA9Q8IUA7 1624 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 HTTP42858 3142 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 H0YGX0 51 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 M0R1W7 72 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 DEFB106AQ8N104 65 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 NOP10Q9NPE3 64 aaKnown RBP0.06□□□□□ -2.4
GPHN-216ENST00000557678 S4R3F8 94 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 NBEAL2Q6ZNJ1 2754 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 BSNQ9UPA5 3926 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 SONP18583 2426 aaKnown RBP0.06□□□□□ -2.4
GPHN-216ENST00000557678 MGAM2Q2M2H8 2515 aa0.06□□□□□ -2.4
GPHN-216ENST00000557678 FAM186AA6NE01 2351 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms