RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 FLG2Q5D862 2391 aaPredicted RBP3.93□□□□□ -1.78
PRKCH-224ENST00000557473 TRGV4A0A0C4DH28 118 aa3.92□□□□□ -1.78
PRKCH-224ENST00000557473 FAM229BQ4G0N7 80 aa3.92□□□□□ -1.78
PRKCH-224ENST00000557473 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
PRKCH-224ENST00000557473 C14orf178Q8N769 122 aaPredicted RBP3.92□□□□□ -1.78
PRKCH-224ENST00000557473 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
PRKCH-224ENST00000557473 GFRA4Q9GZZ7 299 aa3.92□□□□□ -1.78
PRKCH-224ENST00000557473 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 LRCOL1A6NCL2 159 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 SDHAF1A6NFY7 115 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 GAS8-AS1O95177 125 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 TSHBP01222 138 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 IGHV3-33P01772 117 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 TSPEAR-AS2P59090 65 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 DEFB104AQ8WTQ1 72 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 TTTY13Q9BZ97 58 aa3.91□□□□□ -1.78
PRKCH-224ENST00000557473 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
PRKCH-224ENST00000557473 SMR3BP02814 79 aaPredicted RBP3.9□□□□□ -1.79
PRKCH-224ENST00000557473 LINC01556Q5JQF7 62 aa3.9□□□□□ -1.79
PRKCH-224ENST00000557473 Q8N814 137 aa3.9□□□□□ -1.79
PRKCH-224ENST00000557473 Q5VV11 94 aa3.89□□□□□ -1.79
PRKCH-224ENST00000557473 CASC2Q6XLA1 102 aa3.89□□□□□ -1.79
PRKCH-224ENST00000557473 Q6ZSA8 131 aa3.89□□□□□ -1.79
PRKCH-224ENST00000557473 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
PRKCH-224ENST00000557473 CNFNQ9BYD5 112 aa3.89□□□□□ -1.79
PRKCH-224ENST00000557473 KIF25-AS1Q9Y6Z4 181 aa3.89□□□□□ -1.79
PRKCH-224ENST00000557473 TRBV6-4A0A1B0GX49 114 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 LINC01546A6NGU7 62 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 D6R8Y8 96 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 PSCAO43653 123 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 DNAL4O96015 105 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 IGHV3-30-3P0DP02 117 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
PRKCH-224ENST00000557473 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
PRKCH-224ENST00000557473 C11orf86A6NJI1 115 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 HAMPP81172 84 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 PRR4Q16378 134 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 MIAQ16674 131 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 LELP1Q5T871 98 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
PRKCH-224ENST00000557473 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 A0A096LNJ9 63 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 TRBV6-8A0A0A6YYG3 113 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 TRAV12-1A0A0B4J245 112 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 TRBV7-4A0A0J9YYF1 115 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 K7ERS5 55 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 MT3P25713 68 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 SFTA2Q6UW10 78 aa3.86□□□□□ -1.79
PRKCH-224ENST00000557473 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
PRKCH-224ENST00000557473 A0A087WYN8 130 aa3.85□□□□□ -1.79
PRKCH-224ENST00000557473 M0QY20 66 aa3.85□□□□□ -1.79
PRKCH-224ENST00000557473 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
PRKCH-224ENST00000557473 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
PRKCH-224ENST00000557473 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
PRKCH-224ENST00000557473 Q1RN00 199 aa3.85□□□□□ -1.79
PRKCH-224ENST00000557473 LOC101927531A0A1B0GV80 90 aa3.84□□□□□ -1.79
PRKCH-224ENST00000557473 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
PRKCH-224ENST00000557473 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
PRKCH-224ENST00000557473 OCR1Q9BZK8 76 aa3.84□□□□□ -1.79
PRKCH-224ENST00000557473 CDC42SE2Q9NRR3 84 aa3.84□□□□□ -1.79
PRKCH-224ENST00000557473 TRAV23DV6A0A075B6W5 121 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 K7EMI3 77 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 ROMO1P60602 79 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 MOBPQ13875 183 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 MUSTN1Q8IVN3 82 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 TMEM254Q8TBM7 123 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
PRKCH-224ENST00000557473 A0A087WVE0 104 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 A6NED7 52 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 PPP1R17O96001 155 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
PRKCH-224ENST00000557473 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 SMIM2Q9BVW6 85 aa3.82□□□□□ -1.8
PRKCH-224ENST00000557473 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
PRKCH-224ENST00000557473 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.81□□□□□ -1.8
PRKCH-224ENST00000557473 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.81□□□□□ -1.8
PRKCH-224ENST00000557473 IGKV2-29A2NJV5 120 aaPredicted RBP3.81□□□□□ -1.8
PRKCH-224ENST00000557473 F8VRH5 84 aa3.81□□□□□ -1.8
PRKCH-224ENST00000557473 LECT2O14960 151 aa3.81□□□□□ -1.8
PRKCH-224ENST00000557473 CRPP02741 224 aa3.81□□□□□ -1.8
PRKCH-224ENST00000557473 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
PRKCH-224ENST00000557473 C8orf17Q9NRJ1 99 aa3.81□□□□□ -1.8
PRKCH-224ENST00000557473 SNURFQ9Y675 71 aa3.81□□□□□ -1.8
PRKCH-224ENST00000557473 PKHD1L1Q86WI1 4243 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 TRBV6-5A0A0K0K1A5 114 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 I3L3M4 83 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 ELOF1P60002 83 aaKnown RBP3.8□□□□□ -1.8
PRKCH-224ENST00000557473 RPL39P62891 51 aaKnown RBP3.8□□□□□ -1.8
PRKCH-224ENST00000557473 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 NTM-AS1Q6ZSK4 140 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 Q8NDZ9 215 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
PRKCH-224ENST00000557473 IGKV2D-24A0A075B6R9 120 aa3.79□□□□□ -1.8
PRKCH-224ENST00000557473 TRBV10-1A0A0K0K1A3 114 aa3.79□□□□□ -1.8
PRKCH-224ENST00000557473 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
PRKCH-224ENST00000557473 C14orf177Q52M58 125 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms