RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 SNCGO76070 127 aa4.57□□□□□ -1.68
PSEN1-222ENST00000557356 SPRR1BP22528 89 aa4.57□□□□□ -1.68
PSEN1-222ENST00000557356 C3orf22Q8N5N4 141 aa4.57□□□□□ -1.68
PSEN1-222ENST00000557356 LAMTOR3Q9UHA4 124 aa4.57□□□□□ -1.68
PSEN1-222ENST00000557356 IGLV9-49A0A0B4J1Y8 123 aa4.56□□□□□ -1.68
PSEN1-222ENST00000557356 A0A0B4J2C4 111 aa4.56□□□□□ -1.68
PSEN1-222ENST00000557356 TEX49A0A1B0GTD5 131 aa4.56□□□□□ -1.68
PSEN1-222ENST00000557356 RPS29P62273 56 aaKnown RBP4.56□□□□□ -1.68
PSEN1-222ENST00000557356 Q8NBF4 154 aa4.56□□□□□ -1.68
PSEN1-222ENST00000557356 NAA38Q9BRA0 125 aaKnown RBP4.56□□□□□ -1.68
PSEN1-222ENST00000557356 H3BMG7 143 aa4.55□□□□□ -1.68
PSEN1-222ENST00000557356 SCGB1A1P11684 91 aa4.55□□□□□ -1.68
PSEN1-222ENST00000557356 MOBPQ13875 183 aa4.55□□□□□ -1.68
PSEN1-222ENST00000557356 SMIM11BQ8TCY0 68 aa4.55□□□□□ -1.68
PSEN1-222ENST00000557356 PRO1854Q9UHT4 67 aa4.55□□□□□ -1.68
PSEN1-222ENST00000557356 PRO0461Q9UI25 63 aa4.55□□□□□ -1.68
PSEN1-222ENST00000557356 LRP1Q07954 4544 aaKnown RBP4.54□□□□□ -1.68
PSEN1-222ENST00000557356 C9orf153Q5TBE3 101 aa4.54□□□□□ -1.68
PSEN1-222ENST00000557356 FP248Q71RG6 208 aaPredicted RBP4.54□□□□□ -1.68
PSEN1-222ENST00000557356 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
PSEN1-222ENST00000557356 CFC1P0CG37 223 aa4.53□□□□□ -1.68
PSEN1-222ENST00000557356 ST20-AS1Q8NBB2 130 aa4.53□□□□□ -1.68
PSEN1-222ENST00000557356 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
PSEN1-222ENST00000557356 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 hADV29S1A0JD25 119 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 H0YGX0 51 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 ETDBQ3ZM63 59 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 PPDPFLQ8WWR9 84 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
PSEN1-222ENST00000557356 IGLV5-48A0A075B6I7 105 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 F8WEM9 126 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 SCGB1C2P0DMR2 95 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 PSMB2P49721 201 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 CD164Q04900 197 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 ATXN8Q156A1 80 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 TEN1Q86WV5 123 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 LIMD2Q9BT23 127 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
PSEN1-222ENST00000557356 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 TCL1BO95988 128 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 COX6CP09669 75 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
PSEN1-222ENST00000557356 RETNLBQ9BQ08 111 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 CDIP1Q9H305 208 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 HERC1Q15751 4861 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
PSEN1-222ENST00000557356 H7C2G1 150 aa4.48□□□□□ -1.69
PSEN1-222ENST00000557356 Q1RN00 199 aa4.48□□□□□ -1.69
PSEN1-222ENST00000557356 Q6JHZ5 121 aa4.47□□□□□ -1.69
PSEN1-222ENST00000557356 Q8N377 158 aa4.47□□□□□ -1.69
PSEN1-222ENST00000557356 A0A1B0GX51 115 aa4.46□□□□□ -1.7
PSEN1-222ENST00000557356 H3BT86 120 aa4.46□□□□□ -1.7
PSEN1-222ENST00000557356 LINC01547P58512 204 aaPredicted RBP4.46□□□□□ -1.7
PSEN1-222ENST00000557356 Q6ZQY7 126 aa4.46□□□□□ -1.7
PSEN1-222ENST00000557356 SMIM29Q86T20 159 aa4.46□□□□□ -1.7
PSEN1-222ENST00000557356 MTURNQ8N3F0 131 aa4.46□□□□□ -1.7
PSEN1-222ENST00000557356 ANKRD29Q8N6D5 301 aa4.46□□□□□ -1.7
PSEN1-222ENST00000557356 H3BQ85 93 aa4.45□□□□□ -1.7
PSEN1-222ENST00000557356 C21orf62-AS1Q17RA5 79 aa4.45□□□□□ -1.7
PSEN1-222ENST00000557356 Q5XG85 94 aa4.45□□□□□ -1.7
PSEN1-222ENST00000557356 C9JAW5 83 aa4.44□□□□□ -1.7
PSEN1-222ENST00000557356 TRIAP1O43715 76 aa4.44□□□□□ -1.7
PSEN1-222ENST00000557356 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
PSEN1-222ENST00000557356 LST1O00453 97 aa4.43□□□□□ -1.7
PSEN1-222ENST00000557356 HRCT1Q6UXD1 115 aa4.43□□□□□ -1.7
PSEN1-222ENST00000557356 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
PSEN1-222ENST00000557356 A0A0U1RQV1 116 aa4.42□□□□□ -1.7
PSEN1-222ENST00000557356 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
PSEN1-222ENST00000557356 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
PSEN1-222ENST00000557356 TRACP01848 142 aa4.42□□□□□ -1.7
PSEN1-222ENST00000557356 A0A1B0GV72 72 aa4.41□□□□□ -1.7
PSEN1-222ENST00000557356 DNAL4O96015 105 aa4.41□□□□□ -1.7
PSEN1-222ENST00000557356 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
PSEN1-222ENST00000557356 CLEC2BQ92478 149 aa4.41□□□□□ -1.7
PSEN1-222ENST00000557356 TNXBP22105 4242 aa4.41□□□□□ -1.7
PSEN1-222ENST00000557356 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
PSEN1-222ENST00000557356 ACYP1P07311 99 aa4.4□□□□□ -1.71
PSEN1-222ENST00000557356 Q6Q795 121 aa4.4□□□□□ -1.71
PSEN1-222ENST00000557356 NDUFV3P56181 108 aaKnown RBP4.39□□□□□ -1.71
PSEN1-222ENST00000557356 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
PSEN1-222ENST00000557356 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
PSEN1-222ENST00000557356 ASB16-AS1Q495Z4 193 aa4.38□□□□□ -1.71
PSEN1-222ENST00000557356 TRBV7-7A0A0K0K1E9 115 aa4.37□□□□□ -1.71
PSEN1-222ENST00000557356 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
PSEN1-222ENST00000557356 ORMDL1Q9P0S3 153 aa4.37□□□□□ -1.71
PSEN1-222ENST00000557356 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
PSEN1-222ENST00000557356 HMCN2Q8NDA2 5059 aa4.36□□□□□ -1.71
PSEN1-222ENST00000557356 MT-ATP8P03928 68 aa4.36□□□□□ -1.71
PSEN1-222ENST00000557356 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
PSEN1-222ENST00000557356 FAM218AQ96MZ4 157 aa4.36□□□□□ -1.71
PSEN1-222ENST00000557356 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
PSEN1-222ENST00000557356 A0A0G2JQZ4 141 aa4.34□□□□□ -1.71
PSEN1-222ENST00000557356 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
PSEN1-222ENST00000557356 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
PSEN1-222ENST00000557356 LINC00643Q86TS7 51 aa4.32□□□□□ -1.72
PSEN1-222ENST00000557356 TRBV7-4A0A0J9YYF1 115 aa4.31□□□□□ -1.72
PSEN1-222ENST00000557356 OBSCN-AS1Q96MR7 158 aa4.31□□□□□ -1.72
PSEN1-222ENST00000557356 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms