RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
PTPN21-209ENST00000557249 SRCAPQ6ZRS2 3230 aa0.82□□□□□ -2.28
PTPN21-209ENST00000557249 GOLGB1Q14789 3259 aaKnown RBP0.82□□□□□ -2.28
PTPN21-209ENST00000557249 CEP350Q5VT06 3117 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 CACNA1EQ15878 2313 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 LYNX1G3V0Z9 82 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 KLK9Q2XQG4 91 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 TP53AIP1Q9HCN2 124 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 MUC6Q6W4X9 2439 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 CHD9Q3L8U1 2897 aa0.81□□□□□ -2.28
PTPN21-209ENST00000557249 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
PTPN21-209ENST00000557249 DEFB105AQ8NG35 78 aa0.8□□□□□ -2.28
PTPN21-209ENST00000557249 MRPL34Q9BQ48 92 aaKnown RBP0.8□□□□□ -2.28
PTPN21-209ENST00000557249 TRANK1O15050 2925 aa0.8□□□□□ -2.28
PTPN21-209ENST00000557249 CHD7Q9P2D1 2997 aa0.8□□□□□ -2.28
PTPN21-209ENST00000557249 AHCTF1Q8WYP5 2266 aa0.8□□□□□ -2.28
PTPN21-209ENST00000557249 KNL1Q8NG31 2342 aa0.8□□□□□ -2.28
PTPN21-209ENST00000557249 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
PTPN21-209ENST00000557249 DNAH12Q6ZR08 3092 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 DEFB130BP0DP73 79 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 DEFB130AP0DP74 79 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 KRTAP10-4P60372 401 aaPredicted RBP0.79□□□□□ -2.28
PTPN21-209ENST00000557249 H1FX-AS1Q4G0G2 97 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 PCNTO95613 3336 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 TENM1Q9UKZ4 2725 aa0.79□□□□□ -2.28
PTPN21-209ENST00000557249 A0A0D9SG42 100 aa0.78□□□□□ -2.28
PTPN21-209ENST00000557249 PRO0255Q9UI72 69 aa0.78□□□□□ -2.28
PTPN21-209ENST00000557249 UTRNP46939 3433 aa0.78□□□□□ -2.28
PTPN21-209ENST00000557249 CNOT1A5YKK6 2376 aaKnown RBP0.77□□□□□ -2.29
PTPN21-209ENST00000557249 BRCA2P51587 3418 aa0.77□□□□□ -2.29
PTPN21-209ENST00000557249 CENPFP49454 3210 aa0.77□□□□□ -2.29
PTPN21-209ENST00000557249 RP1L1Q8IWN7 2480 aaPredicted RBP0.76□□□□□ -2.29
PTPN21-209ENST00000557249 ROS1P08922 2347 aa0.76□□□□□ -2.29
PTPN21-209ENST00000557249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.76□□□□□ -2.29
PTPN21-209ENST00000557249 PRLHP81277 87 aa0.76□□□□□ -2.29
PTPN21-209ENST00000557249 DEFB123Q8N688 67 aa0.76□□□□□ -2.29
PTPN21-209ENST00000557249 DEFB108BQ8NET1 73 aa0.76□□□□□ -2.29
PTPN21-209ENST00000557249 ALMS1Q8TCU4 4167 aa0.76□□□□□ -2.29
PTPN21-209ENST00000557249 CEP290O15078 2479 aa0.76□□□□□ -2.29
PTPN21-209ENST00000557249 PIEZO2Q9H5I5 2752 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 HELZ2Q9BYK8 2649 aaKnown RBP0.75□□□□□ -2.29
PTPN21-209ENST00000557249 FAM186AA6NE01 2351 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 SPINK1P00995 79 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 DEFB131AP59861 70 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 DEFB109BQ30KR1 87 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 USMG5Q96IX5 58 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 RANBP2P49792 3224 aaKnown RBP0.75□□□□□ -2.29
PTPN21-209ENST00000557249 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
PTPN21-209ENST00000557249 PTPRZ1P23471 2315 aaPredicted RBP0.75□□□□□ -2.29
PTPN21-209ENST00000557249 A0A0C4DFX4 3053 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 ASH1LQ9NR48 2969 aaKnown RBP0.74□□□□□ -2.29
PTPN21-209ENST00000557249 CACNA1HO95180 2353 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 PLCE1Q9P212 2302 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 H3BUA1 57 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 HTN1P15515 57 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 COX6B2Q6YFQ2 88 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 APLNQ9ULZ1 77 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 MKI67P46013 3256 aaKnown RBP0.74□□□□□ -2.29
PTPN21-209ENST00000557249 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
PTPN21-209ENST00000557249 PCNX1Q96RV3 2341 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 REV3LO60673 3130 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 LAMA3Q16787 3333 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 IGF2RP11717 2491 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 DEFB136Q30KP8 78 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 KRTAP21-3Q3LHN1 58 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 DEFB124Q8NES8 71 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 RHPN1-AS1Q9BWJ2 59 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 S4R3F8 94 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 UNC80Q8N2C7 3258 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 NCOR1O75376 2440 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 CDH23Q9H251 3354 aa0.73□□□□□ -2.29
PTPN21-209ENST00000557249 C5orf42Q9H799 3197 aa0.72□□□□□ -2.29
PTPN21-209ENST00000557249 SPRR1BP22528 89 aa0.72□□□□□ -2.29
PTPN21-209ENST00000557249 SPRR1AP35321 89 aa0.72□□□□□ -2.29
PTPN21-209ENST00000557249 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
PTPN21-209ENST00000557249 LAMA2P24043 3122 aaKnown RBP0.72□□□□□ -2.29
PTPN21-209ENST00000557249 ANKHD1Q8IWZ3 2542 aaKnown RBP0.72□□□□□ -2.29
PTPN21-209ENST00000557249 TENM2Q9NT68 2774 aa0.72□□□□□ -2.29
PTPN21-209ENST00000557249 TTC28Q96AY4 2481 aa0.72□□□□□ -2.29
PTPN21-209ENST00000557249 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
PTPN21-209ENST00000557249 SZT2Q5T011 3432 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 BDP1A6H8Y1 2624 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 APC2O95996 2303 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 WNK2Q9Y3S1 2297 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 EP300Q09472 2414 aaPredicted RBP0.71□□□□□ -2.3
PTPN21-209ENST00000557249 SPTBN1Q01082 2364 aaKnown RBP0.71□□□□□ -2.3
PTPN21-209ENST00000557249 TLN1Q9Y490 2541 aaKnown RBP0.71□□□□□ -2.3
PTPN21-209ENST00000557249 XIRP2A4UGR9 3374 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 PKDREJQ9NTG1 2253 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 MAP1BP46821 2468 aaKnown RBP0.71□□□□□ -2.3
PTPN21-209ENST00000557249 DNAH14Q0VDD8 3507 aa0.71□□□□□ -2.3
PTPN21-209ENST00000557249 VCANP13611 3396 aa0.7□□□□□ -2.3
PTPN21-209ENST00000557249 ACACAQ13085 2346 aa0.7□□□□□ -2.3
PTPN21-209ENST00000557249 CSPG4Q6UVK1 2322 aa0.7□□□□□ -2.3
PTPN21-209ENST00000557249 TRIOO75962 3097 aa0.7□□□□□ -2.3
PTPN21-209ENST00000557249 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
PTPN21-209ENST00000557249 SPTBN5Q9NRC6 3674 aaKnown RBP0.7□□□□□ -2.3
PTPN21-209ENST00000557249 ZNF292O60281 2723 aa0.7□□□□□ -2.3
PTPN21-209ENST00000557249 ZNF462Q96JM2 2506 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms