RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 LITAFQ99732 161 aa4.61□□□□□ -1.67
VRK1-206ENST00000557222 FABP4P15090 132 aa4.6□□□□□ -1.67
VRK1-206ENST00000557222 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
VRK1-206ENST00000557222 PMCHL2Q9BQD1 86 aa4.6□□□□□ -1.67
VRK1-206ENST00000557222 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.67
VRK1-206ENST00000557222 C6orf99Q4VX62 202 aa4.59□□□□□ -1.67
VRK1-206ENST00000557222 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
VRK1-206ENST00000557222 Q1RN00 199 aa4.58□□□□□ -1.68
VRK1-206ENST00000557222 SMIM29Q86T20 159 aa4.58□□□□□ -1.68
VRK1-206ENST00000557222 DEFB105AQ8NG35 78 aa4.58□□□□□ -1.68
VRK1-206ENST00000557222 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
VRK1-206ENST00000557222 A4D1N5 150 aa4.57□□□□□ -1.68
VRK1-206ENST00000557222 TCL1BO95988 128 aa4.57□□□□□ -1.68
VRK1-206ENST00000557222 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
VRK1-206ENST00000557222 COPS9Q8WXC6 57 aa4.57□□□□□ -1.68
VRK1-206ENST00000557222 ZNF815PA8K554 130 aa4.55□□□□□ -1.68
VRK1-206ENST00000557222 SYS1-DBNDD2H3BUS1 97 aa4.55□□□□□ -1.68
VRK1-206ENST00000557222 PCP4P48539 62 aa4.55□□□□□ -1.68
VRK1-206ENST00000557222 NHP2Q9NX24 153 aaKnown RBP4.55□□□□□ -1.68
VRK1-206ENST00000557222 IFITM1P13164 125 aa4.54□□□□□ -1.68
VRK1-206ENST00000557222 LINC01545Q5VT33 79 aa4.54□□□□□ -1.68
VRK1-206ENST00000557222 PET117Q6UWS5 81 aa4.54□□□□□ -1.68
VRK1-206ENST00000557222 Q6ZVH6 145 aa4.54□□□□□ -1.68
VRK1-206ENST00000557222 USH2AO75445 5202 aa4.52□□□□□ -1.69
VRK1-206ENST00000557222 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
VRK1-206ENST00000557222 COLCA2A8K830 154 aa4.51□□□□□ -1.69
VRK1-206ENST00000557222 CFC1P0CG37 223 aa4.51□□□□□ -1.69
VRK1-206ENST00000557222 Q6JHZ5 121 aa4.51□□□□□ -1.69
VRK1-206ENST00000557222 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
VRK1-206ENST00000557222 Q75L30 129 aa4.51□□□□□ -1.69
VRK1-206ENST00000557222 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
VRK1-206ENST00000557222 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
VRK1-206ENST00000557222 A0A0G2JQZ4 141 aa4.5□□□□□ -1.69
VRK1-206ENST00000557222 A6NDN8 102 aa4.5□□□□□ -1.69
VRK1-206ENST00000557222 F8WEM9 126 aa4.5□□□□□ -1.69
VRK1-206ENST00000557222 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
VRK1-206ENST00000557222 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
VRK1-206ENST00000557222 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
VRK1-206ENST00000557222 VAMP3Q15836 100 aa4.48□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BKO60814 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
VRK1-206ENST00000557222 PCP2Q8IVA1 136 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 SMIM11BQ8TCY0 68 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 CLEC2BQ92478 149 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
VRK1-206ENST00000557222 C20orf202A1L168 122 aa4.46□□□□□ -1.7
VRK1-206ENST00000557222 C3orf79P0CE67 100 aa4.46□□□□□ -1.7
VRK1-206ENST00000557222 Q6Q795 121 aa4.46□□□□□ -1.7
VRK1-206ENST00000557222 LINC00575Q6W349 94 aa4.46□□□□□ -1.7
VRK1-206ENST00000557222 PPDPFLQ8WWR9 84 aa4.46□□□□□ -1.7
VRK1-206ENST00000557222 OBSCN-AS1Q96MR7 158 aa4.46□□□□□ -1.7
VRK1-206ENST00000557222 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
VRK1-206ENST00000557222 OCIAD2Q56VL3 154 aa4.45□□□□□ -1.7
VRK1-206ENST00000557222 hADV29S1A0JD25 119 aa4.44□□□□□ -1.7
VRK1-206ENST00000557222 IGFL1Q6UW32 110 aa4.44□□□□□ -1.7
VRK1-206ENST00000557222 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
VRK1-206ENST00000557222 LST1O00453 97 aa4.43□□□□□ -1.7
VRK1-206ENST00000557222 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
VRK1-206ENST00000557222 SNRPEP62304 92 aaKnown RBP4.43□□□□□ -1.7
VRK1-206ENST00000557222 COA6Q5JTJ3 125 aaKnown RBP4.43□□□□□ -1.7
VRK1-206ENST00000557222 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
VRK1-206ENST00000557222 Q6ZQY7 126 aa4.43□□□□□ -1.7
VRK1-206ENST00000557222 SLC7A5P1Q8MH63 180 aa4.43□□□□□ -1.7
VRK1-206ENST00000557222 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
VRK1-206ENST00000557222 TRBV20-1A0A075B6N2 111 aa4.42□□□□□ -1.7
VRK1-206ENST00000557222 KRTDAPP60985 99 aa4.42□□□□□ -1.7
VRK1-206ENST00000557222 Q96NJ1 140 aa4.42□□□□□ -1.7
VRK1-206ENST00000557222 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
VRK1-206ENST00000557222 A8MUU9 505 aa4.41□□□□□ -1.7
VRK1-206ENST00000557222 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
VRK1-206ENST00000557222 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
VRK1-206ENST00000557222 TEN1Q86WV5 123 aa4.37□□□□□ -1.71
VRK1-206ENST00000557222 ATOH7Q8N100 152 aa4.36□□□□□ -1.71
VRK1-206ENST00000557222 SNCGO76070 127 aa4.35□□□□□ -1.71
VRK1-206ENST00000557222 MT2AP02795 61 aa4.35□□□□□ -1.71
VRK1-206ENST00000557222 C12orf57Q99622 126 aa4.35□□□□□ -1.71
VRK1-206ENST00000557222 H3BUT2 72 aa4.34□□□□□ -1.71
VRK1-206ENST00000557222 HSBP1L1C9JCN9 74 aa4.33□□□□□ -1.72
VRK1-206ENST00000557222 H0YGX0 51 aa4.32□□□□□ -1.72
VRK1-206ENST00000557222 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
VRK1-206ENST00000557222 RBM12B-AS1Q9P1G2 102 aa4.32□□□□□ -1.72
VRK1-206ENST00000557222 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
VRK1-206ENST00000557222 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
VRK1-206ENST00000557222 A0A087WSZ3 146 aa4.31□□□□□ -1.72
VRK1-206ENST00000557222 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
VRK1-206ENST00000557222 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
VRK1-206ENST00000557222 LINC00313P59037 77 aa4.31□□□□□ -1.72
VRK1-206ENST00000557222 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
VRK1-206ENST00000557222 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
VRK1-206ENST00000557222 A0A1B0GX51 115 aa4.3□□□□□ -1.72
VRK1-206ENST00000557222 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms