RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 MRC2Q9UBG0 1479 aa-4.2□□□□□ -3.08
LINC00648-203ENST00000556923 UBR1Q8IWV7 1749 aa-4.21□□□□□ -3.08
LINC00648-203ENST00000556923 CENPFP49454 3210 aa-4.21□□□□□ -3.08
LINC00648-203ENST00000556923 IFI6P09912 130 aa-4.21□□□□□ -3.08
LINC00648-203ENST00000556923 GNG11P61952 73 aa-4.21□□□□□ -3.08
LINC00648-203ENST00000556923 QSER1Q2KHR3 1735 aa-4.21□□□□□ -3.08
LINC00648-203ENST00000556923 EIF4G3O43432 1585 aaKnown RBP-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 FAM25AB3EWG3 89 aa-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 FAM25CB3EWG5 89 aa-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 FAM25GB3EWG6 89 aa-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 M0QY20 66 aa-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 COX6CP09669 75 aa-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 WT1-ASQ06250 92 aa-4.22□□□□□ -3.08
LINC00648-203ENST00000556923 SUPT6HQ7KZ85 1726 aaKnown RBP-4.22□□□□□ -3.09
LINC00648-203ENST00000556923 ABCC5O15440 1437 aa-4.22□□□□□ -3.09
LINC00648-203ENST00000556923 ASPMQ8IZT6 3477 aa-4.23□□□□□ -3.09
LINC00648-203ENST00000556923 TARBP1Q13395 1621 aaKnown RBP-4.23□□□□□ -3.09
LINC00648-203ENST00000556923 A0A0G2JND7 137 aa-4.23□□□□□ -3.09
LINC00648-203ENST00000556923 F6UZH7 168 aa-4.23□□□□□ -3.09
LINC00648-203ENST00000556923 S100PP25815 95 aa-4.23□□□□□ -3.09
LINC00648-203ENST00000556923 CROCC2H7BZ55 1655 aa-4.24□□□□□ -3.09
LINC00648-203ENST00000556923 OOSP1A8MZH6 123 aa-4.24□□□□□ -3.09
LINC00648-203ENST00000556923 ARMS2P0C7Q2 107 aa-4.24□□□□□ -3.09
LINC00648-203ENST00000556923 UBR3Q6ZT12 1888 aa-4.24□□□□□ -3.09
LINC00648-203ENST00000556923 TOP2BQ02880 1626 aa-4.24□□□□□ -3.09
LINC00648-203ENST00000556923 LINC00470Q9BZP3 86 aa-4.25□□□□□ -3.09
LINC00648-203ENST00000556923 SELENOWP63302 87 aa-4.26□□□□□ -3.09
LINC00648-203ENST00000556923 GNG7O60262 68 aa-4.27□□□□□ -3.09
LINC00648-203ENST00000556923 ACYP1P07311 99 aa-4.27□□□□□ -3.09
LINC00648-203ENST00000556923 MLH3Q9UHC1 1453 aa-4.27□□□□□ -3.09
LINC00648-203ENST00000556923 ITSN2Q9NZM3 1697 aa-4.27□□□□□ -3.09
LINC00648-203ENST00000556923 ZNF436-AS1Q8NC38 126 aaPredicted RBP-4.28□□□□□ -3.09
LINC00648-203ENST00000556923 C12orf57Q99622 126 aa-4.28□□□□□ -3.09
LINC00648-203ENST00000556923 PRO1854Q9UHT4 67 aa-4.28□□□□□ -3.09
LINC00648-203ENST00000556923 A2ML1A8K2U0 1454 aa-4.29□□□□□ -3.1
LINC00648-203ENST00000556923 GNGT1P63211 74 aa-4.29□□□□□ -3.1
LINC00648-203ENST00000556923 PSMG4Q5JS54 123 aa-4.29□□□□□ -3.1
LINC00648-203ENST00000556923 DEFB107AQ8IZN7 70 aa-4.29□□□□□ -3.1
LINC00648-203ENST00000556923 PAIP2BQ9ULR5 123 aaKnown RBP-4.29□□□□□ -3.1
LINC00648-203ENST00000556923 TOPAZ1Q8N9V7 1692 aa-4.3□□□□□ -3.1
LINC00648-203ENST00000556923 NESP48681 1621 aa-4.31□□□□□ -3.1
LINC00648-203ENST00000556923 KIF1AQ12756 1690 aa-4.31□□□□□ -3.1
LINC00648-203ENST00000556923 DPH3P1Q9H4G8 78 aa-4.31□□□□□ -3.1
LINC00648-203ENST00000556923 LRRC9Q6ZRR7 1453 aa-4.31□□□□□ -3.1
LINC00648-203ENST00000556923 H0Y9P7 68 aa-4.32□□□□□ -3.1
LINC00648-203ENST00000556923 H3BQF6 201 aa-4.32□□□□□ -3.1
LINC00648-203ENST00000556923 MON2Q7Z3U7 1717 aa-4.32□□□□□ -3.1
LINC00648-203ENST00000556923 EEA1Q15075 1411 aa-4.33□□□□□ -3.1
LINC00648-203ENST00000556923 NAIPQ13075 1403 aa-4.34□□□□□ -3.1
LINC00648-203ENST00000556923 CDH23Q9H251 3354 aa-4.34□□□□□ -3.1
LINC00648-203ENST00000556923 SHPRHQ149N8 1683 aa-4.35□□□□□ -3.11
LINC00648-203ENST00000556923 ZFYVE16Q7Z3T8 1539 aa-4.35□□□□□ -3.11
LINC00648-203ENST00000556923 SCAPERQ9BY12 1400 aa-4.35□□□□□ -3.11
LINC00648-203ENST00000556923 PLIN4Q96Q06 1357 aa-4.35□□□□□ -3.11
LINC00648-203ENST00000556923 RPL38P63173 70 aaKnown RBP-4.35□□□□□ -3.11
LINC00648-203ENST00000556923 SAMD9Q5K651 1589 aa-4.36□□□□□ -3.11
LINC00648-203ENST00000556923 LRRC7Q96NW7 1537 aa-4.36□□□□□ -3.11
LINC00648-203ENST00000556923 NCOA2Q15596 1464 aa-4.36□□□□□ -3.11
LINC00648-203ENST00000556923 HSD52Q0P140 79 aa-4.36□□□□□ -3.11
LINC00648-203ENST00000556923 KTN1Q86UP2 1357 aaKnown RBP-4.37□□□□□ -3.11
LINC00648-203ENST00000556923 SPHKAPQ2M3C7 1700 aa-4.37□□□□□ -3.11
LINC00648-203ENST00000556923 C20orf202A1L168 122 aa-4.37□□□□□ -3.11
LINC00648-203ENST00000556923 ATP5EP56381 51 aaPredicted RBP-4.37□□□□□ -3.11
LINC00648-203ENST00000556923 AP4S1Q9Y587 144 aa-4.37□□□□□ -3.11
LINC00648-203ENST00000556923 MED14O60244 1454 aa-4.37□□□□□ -3.11
LINC00648-203ENST00000556923 C5P01031 1676 aa-4.38□□□□□ -3.11
LINC00648-203ENST00000556923 RPS27P42677 84 aaKnown RBP-4.38□□□□□ -3.11
LINC00648-203ENST00000556923 RPS27LQ71UM5 84 aaKnown RBP-4.38□□□□□ -3.11
LINC00648-203ENST00000556923 C7orf77A4D0Y5 90 aa-4.39□□□□□ -3.11
LINC00648-203ENST00000556923 H3BUA1 57 aa-4.39□□□□□ -3.11
LINC00648-203ENST00000556923 LRRIQ1Q96JM4 1722 aa-4.39□□□□□ -3.11
LINC00648-203ENST00000556923 THOC2Q8NI27 1593 aaKnown RBP-4.4□□□□□ -3.11
LINC00648-203ENST00000556923 NAP1L6A6NFF2 107 aa-4.41□□□□□ -3.12
LINC00648-203ENST00000556923 NDUFC1O43677 76 aa-4.41□□□□□ -3.12
LINC00648-203ENST00000556923 FAM135AQ9P2D6 1515 aa-4.41□□□□□ -3.12
LINC00648-203ENST00000556923 BRCA2P51587 3418 aa-4.42□□□□□ -3.12
LINC00648-203ENST00000556923 BVES-AS1Q5T3Y7 98 aa-4.42□□□□□ -3.12
LINC00648-203ENST00000556923 NRXN3Q9Y4C0 1643 aa-4.43□□□□□ -3.12
LINC00648-203ENST00000556923 NWD1Q149M9 1564 aa-4.43□□□□□ -3.12
LINC00648-203ENST00000556923 LEPROTL1O95214 131 aa-4.43□□□□□ -3.12
LINC00648-203ENST00000556923 FAM24AA6NFZ4 105 aa-4.44□□□□□ -3.12
LINC00648-203ENST00000556923 DOT1LQ8TEK3 1739 aa-4.44□□□□□ -3.12
LINC00648-203ENST00000556923 IGLC2P0DOY2 106 aa-4.45□□□□□ -3.12
LINC00648-203ENST00000556923 IGLC3P0DOY3 106 aa-4.45□□□□□ -3.12
LINC00648-203ENST00000556923 MRPS10P82664 201 aaKnown RBP-4.45□□□□□ -3.12
LINC00648-203ENST00000556923 ZC3H13Q5T200 1668 aaKnown RBP-4.45□□□□□ -3.12
LINC00648-203ENST00000556923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-4.46□□□□□ -3.12
LINC00648-203ENST00000556923 KIAA0586Q9BVV6 1533 aa-4.46□□□□□ -3.12
LINC00648-203ENST00000556923 VPS13AQ96RL7 3174 aa-4.47□□□□□ -3.12
LINC00648-203ENST00000556923 CD163L1Q9NR16 1453 aa-4.47□□□□□ -3.12
LINC00648-203ENST00000556923 SFTA3P0C7M3 94 aa-4.47□□□□□ -3.13
LINC00648-203ENST00000556923 AKAIN1P0CW23 69 aa-4.47□□□□□ -3.13
LINC00648-203ENST00000556923 VAMP8Q9BV40 100 aa-4.47□□□□□ -3.13
LINC00648-203ENST00000556923 CRYM-AS1A6NIL9 109 aa-4.49□□□□□ -3.13
LINC00648-203ENST00000556923 NCBP2-AS2Q69YL0 99 aa-4.49□□□□□ -3.13
LINC00648-203ENST00000556923 LOC105371267A0A1B0GV96 52 aa-4.5□□□□□ -3.13
LINC00648-203ENST00000556923 DDX60LQ5H9U9 1706 aaKnown RBP-4.52□□□□□ -3.13
LINC00648-203ENST00000556923 RGPD1P0DJD0 1748 aa-4.52□□□□□ -3.13
LINC00648-203ENST00000556923 PPLO60437 1756 aa-4.53□□□□□ -3.13
LINC00648-203ENST00000556923 ITSN1Q15811 1721 aa-4.53□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms